Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P17
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    49   2e-08
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    33   0.001
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   5.4  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    20   9.4  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    20   9.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   9.4  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 49.2 bits (112), Expect = 2e-08
 Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +3

Query: 60  MYKFTILFLVLACFIMAEAQLTFTSSWGGKRAAIAGTVSCRND-ESLASIYKLIQNEAEK 236
           M++  +  L++    +  AQL FT +WG KRA    +  C+   +++  IYK+IQNEA+K
Sbjct: 1   MHRVLLTVLLITIVGLCAAQLNFTPNWG-KRAPEGESNRCKESVDTIMLIYKIIQNEAQK 59

Query: 237 LLLCQK 254
           L+ C+K
Sbjct: 60  LVDCEK 65


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 33.5 bits (73), Expect = 0.001
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
 Frame = +3

Query: 78  LFLVLACFI-MAEAQLTFTSSWGGKRAAIAGT--VSCRND-ESLASIYKLIQ 221
           L +VL  F+ +  AQL F++ WG +  + AG+   +C+   E++  IYK+IQ
Sbjct: 6   LIVVLIAFVGVCTAQLNFSTDWGKRSGSSAGSDANNCKEPVETIMLIYKIIQ 57


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 198 PRIHRSCRTQC 166
           P++H  CR++C
Sbjct: 79  PQLHNLCRSEC 89


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 198 PRIHRSCRTQCRR 160
           PR  R  RTQC R
Sbjct: 85  PRALRRLRTQCER 97


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 198 PRIHRSCRTQCRR 160
           PR  R  RTQC R
Sbjct: 85  PRALRRLRTQCER 97


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 124 LSHPAGVEKGLPSPAL 171
           L HPA     L SPA+
Sbjct: 119 LPHPAAAHSALLSPAM 134



 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 236 TPAMPEALSRH 268
           +PAMP  L+RH
Sbjct: 131 SPAMPHNLTRH 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,551
Number of Sequences: 336
Number of extensions: 2049
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)