Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_P16
(840 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein. 27 0.71
AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 prote... 27 0.71
AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 prote... 27 0.71
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 26 1.6
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 3.8
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 24 5.0
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 24 6.6
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 23 8.7
>Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein.
Length = 111
Score = 27.1 bits (57), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 384 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 470
+H+ +K +N K KH+ NL GG +
Sbjct: 75 YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103
>AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 27.1 bits (57), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 384 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 470
+H+ +K +N K KH+ NL GG +
Sbjct: 75 YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103
>AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 27.1 bits (57), Expect = 0.71
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 384 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 470
+H+ +K +N K KH+ NL GG +
Sbjct: 75 YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 25.8 bits (54), Expect = 1.6
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 296 QAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQE 442
Q +Q +P + + Q +Q R+ PP++R+ ++ Q Q QQ+
Sbjct: 271 QQRQQQQRPRQQQQQQ-QQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQ 318
Score = 25.8 bits (54), Expect = 1.6
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 224 QAAAPSQLRKRGRGQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVRED 403
Q Q +++ R Q + + Q H+Q Q + + Q +Q R+ P R +
Sbjct: 335 QRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQ----QQQQQQPRQSLPHRKQTQ 390
Query: 404 YE---RLQQNCQTQQESVHEGWERPR 472
+ RLQQ Q QQ+S + ++P+
Sbjct: 391 LQLSPRLQQQQQQQQQSQQQQQQQPQ 416
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 350 QAGHEQVRRHAPPRVREDYERLQQNCQTQQE 442
Q +Q R+ PP++R+ ++ Q+ Q QQ+
Sbjct: 255 QQQQQQGERYVPPQLRQQRQQQQRPRQQQQQ 285
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.6 bits (51), Expect = 3.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 392 VREDYERLQQNCQTQQESVHEGWERPRG 475
++EDY RL+ Q +E +++ RG
Sbjct: 174 LKEDYNRLKHEMQMAEEETQFTYQKKRG 201
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 24.2 bits (50), Expect = 5.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 338 PRFLQAGHEQVRRHAPPRVREDYER 412
PR+LQ ++++RH R RE +R
Sbjct: 700 PRYLQVSMDELKRHTQQR-REQLQR 723
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 23.8 bits (49), Expect = 6.6
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 233 APSQLRKRGR-GQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYE 409
A S +RGR G E + Q H ++ Q + + + Q +Q ++ R + +
Sbjct: 205 AHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQ 264
Query: 410 RLQQNCQTQQE 442
+ QQ+ Q +Q+
Sbjct: 265 QQQQHQQREQQ 275
Score = 23.8 bits (49), Expect = 6.6
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +2
Query: 242 QLRKRGRGQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQ 421
Q +++ + Q + R Q +Q Q + ++ R Q ++V++ R+ ++ QQ
Sbjct: 239 QQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQ-QQRVQQQNQQHQRQQQQQQQQ 297
Query: 422 NCQTQQESVHEGW 460
Q QQ+ E W
Sbjct: 298 RQQQQQQEQQELW 310
Score = 23.4 bits (48), Expect = 8.7
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 293 AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQE 442
AQ H R GP+ + +Q + + ++ ++ QQ Q QQ+
Sbjct: 202 AQGAHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQ 251
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 23.4 bits (48), Expect = 8.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 591 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 707
TT L H + SLS Q+ YGNN GG
Sbjct: 349 TTAGLNSSHIYTTPSSNSLSTQHSHSPVNGYGNNHPTGG 387
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,900
Number of Sequences: 2352
Number of extensions: 17533
Number of successful extensions: 32
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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