Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_P15
(772 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 32 0.10
SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr 2||... 30 0.32
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 27 3.9
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 26 5.2
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 5.2
SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|... 26 6.9
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 25 9.1
SPBC800.12c |||ubiquitin family protein, unknown|Schizosaccharom... 25 9.1
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 9.1
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 31.9 bits (69), Expect = 0.10
Identities = 32/157 (20%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = +3
Query: 249 TPNTDIPPYPNVDPF-NYDTMKNSLIERLESFTSAPFTVQRICELLTYPRKQYNRVDKFM 425
+P +P P+ P +Y +N LI S S P R EL+ YP + + K +
Sbjct: 200 SPQEALPLMPSSPPSQDYQNDQNHLILYTNS-ESIPKLNLRSNELV-YPPPSKDLLQKLL 257
Query: 426 RAIEKNILVVSTREPGIVRQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQR 605
A+EK+ V + + N + L+NG+D+N+ +V++ + K ++
Sbjct: 258 -ALEKDGQVEKSDCSKNTQLKPSFLPKNTDDLLNGTDDNNIVLREVKVSFENEKIESDDL 316
Query: 606 NSEPQPCSSDAHISVDDVETRLITKRDTPMEVQDNNA 716
+ + + + +++ + + +RD+ +++ +++A
Sbjct: 317 DKNEEISEGEEYTPIEESKEPITVRRDSVIQIDESSA 353
>SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 322
Score = 30.3 bits (65), Expect = 0.32
Identities = 25/90 (27%), Positives = 38/90 (42%)
Frame = +3
Query: 69 DDIYGYLEEFSKRKPKSIPQELNEYLAYVARTGDPVYQWPLVKSLFKEKLLNVITDFYDT 248
+D Y +E+F K PK+ P+E+ EY V ++ +W L L L + D
Sbjct: 127 NDHYISIEQFCKNMPKTTPEEVLEYEFNVCQS----LKWDLYVWLPFRPLQGFLLDCQTV 182
Query: 249 TPNTDIPPYPNVDPFNYDTMKNSLIERLES 338
P + + +D K LIE L S
Sbjct: 183 LPKVAVEKFYEC----HDLSKKFLIETLHS 208
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Frame = +3
Query: 495 ENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDDVETRLI 674
E+ +++ V+ S+ NSE ++ + + +E+ + NSE SD+ + L
Sbjct: 116 EDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELE 175
Query: 675 T-----KRDTPMEVQDNNAKQLE 728
KR+ ++ + N A + E
Sbjct: 176 NIKQERKREQMLQEEKNRALEQE 198
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 5.2
Identities = 26/118 (22%), Positives = 48/118 (40%)
Frame = +3
Query: 294 NYDTMKNSLIERLESFTSAPFTVQRICELLTYPRKQYNRVDKFMRAIEKNILVVSTREPG 473
+Y T N+L+ER VQ+I N + + + N++
Sbjct: 541 SYGTEINNLLERRNELLDDYNNVQKILNESLEASVHLNTKNLELADLNNNLV------KQ 594
Query: 474 IVRQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHIS 647
I + PEN N EH + S N+ +++ + VS + Q + P P S + +++
Sbjct: 595 IQHRVPPENQSNLEHTITTSSKNTTSSIN-PLTAVS--SNSGQSSGRPGPLSPNLNVT 649
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 114 KSIPQELNEYLAYVARTGDPVYQWPLVKSLFKEKLLNVITDFYDTTPNTDIPPYPNV 284
K + ++ NE + Y + D + ++ L K L N+ T+ DT+ + PNV
Sbjct: 1115 KHLKEQFNEGVDYDLLSSDEEFDVHVIAGLLKLYLRNLPTNLLDTSMHKLFELLPNV 1171
>SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 531 SDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDD 656
S N+SE D+ V+ +E +E + PQ S +++DD
Sbjct: 86 SKNDSEITPDINRSKVNPQEYSEFSVASPQTISPSLPLNLDD 127
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 477 VRQPEPENGD--NAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQPCSSDAHISV 650
+ +P+P+ A + + + +V +VS +E ++Q SEP P D
Sbjct: 195 LEKPKPKTASLIKAYKMAQSTPDLDSLSVPSSESEVS-EEESDQEMSEPSPIEED----Y 249
Query: 651 DDVETRLITKRDT 689
+D + R IT++ T
Sbjct: 250 NDTKARRITRKGT 262
>SPBC800.12c |||ubiquitin family protein,
unknown|Schizosaccharomyces pombe|chr 2|||Manual
Length = 137
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 57 MENADDIYGYLEEFSK---RKPKSIPQELNEYLAYVARTGDPVYQWPLVKSLFKEKLLNV 227
M + +LEE SK P SIP E + A P+ ++ +LF+EK ++V
Sbjct: 1 MSEVQIVKSFLEELSKTPRNHPDSIPIEKIDETAISITIPAPLVEFQGNLALFEEKKVHV 60
Query: 228 I 230
+
Sbjct: 61 V 61
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +3
Query: 603 RNSEPQPCSSDAHISVDDVETRLITKRDTPMEVQDNNAKQLESATPSDFKTGTNXT 770
R+SE P SSD ++ E + +TP + N +L+ + + G T
Sbjct: 1642 RSSEVLPTSSDTNLDAKRAEEAEMIMIETPPTAEANTGAKLDRSLSLGSRRGPGHT 1697
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,360,780
Number of Sequences: 5004
Number of extensions: 73484
Number of successful extensions: 249
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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