Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_P12
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase su... 77 2e-14
D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase su... 77 2e-14
AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical... 77 2e-14
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 30 1.4
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 30 1.4
U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical pr... 30 1.8
U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical pr... 30 1.8
U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75531-12|CAA99806.4| 348|Caenorhabditis elegans Hypothetical p... 29 4.1
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 29 4.1
Z72502-3|CAA96593.2| 218|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81477-7|CAB03927.2| 326|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 27 9.6
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 27 9.6
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL022288-7|CAA18369.1| 326|Caenorhabditis elegans Hypothetical ... 27 9.6
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 27 9.6
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 27 9.6
AC006632-1|AAK85466.1| 311|Caenorhabditis elegans Hypothetical ... 27 9.6
>D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = +2
Query: 203 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 382
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65
Query: 383 YAILGFALSE 412
YAILGFALSE
Sbjct: 66 YAILGFALSE 75
>D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = +2
Query: 203 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 382
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65
Query: 383 YAILGFALSE 412
YAILGFALSE
Sbjct: 66 YAILGFALSE 75
>AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical
protein Y82E9BR.3 protein.
Length = 116
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/70 (57%), Positives = 43/70 (61%)
Frame = +2
Query: 203 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 382
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 30 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 89
Query: 383 YAILGFALSE 412
YAILGFALSE
Sbjct: 90 YAILGFALSE 99
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = -1
Query: 349 GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 173
G D+ + CS S G + S C C + + G GP C E CR RY
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591
Query: 172 LCMGGYSCKWSHQC 131
G SC+ QC
Sbjct: 1592 ----GQSCQNKCQC 1601
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = -1
Query: 349 GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 173
G D+ + CS S G + S C C + + G GP C E CR RY
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591
Query: 172 LCMGGYSCKWSHQC 131
G SC+ QC
Sbjct: 1592 ----GQSCQNKCQC 1601
>U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical
protein W05H7.4a protein.
Length = 605
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = -1
Query: 274 TSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYSCKWSHQCRVAEDGRPGCQG 95
++ N+ G+R + +D GL H +E+ R + H + Y C S + A G Q
Sbjct: 70 SNLNQRGTRRLIFADTRGLPLVHVKEIERIAAIHSNVADYRC--SERNEAAAFG----QE 123
Query: 94 RSVWRQTAFCFYKVRRATTKNTEKEETGL 8
V+ + V+R+ +E E+GL
Sbjct: 124 MEVFEDVEWSLVPVKRSKPARSEMSESGL 152
>U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical
protein W05H7.4e protein.
Length = 666
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = -1
Query: 274 TSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYSCKWSHQCRVAEDGRPGCQG 95
++ N+ G+R + +D GL H +E+ R + H + Y C S + A G Q
Sbjct: 131 SNLNQRGTRRLIFADTRGLPLVHVKEIERIAAIHSNVADYRC--SERNEAAAFG----QE 184
Query: 94 RSVWRQTAFCFYKVRRATTKNTEKEETGL 8
V+ + V+R+ +E E+GL
Sbjct: 185 MEVFEDVEWSLVPVKRSKPARSEMSESGL 213
>U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical
protein W05H7.4b protein.
Length = 663
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = -1
Query: 274 TSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYSCKWSHQCRVAEDGRPGCQG 95
++ N+ G+R + +D GL H +E+ R + H + Y C S + A G Q
Sbjct: 128 SNLNQRGTRRLIFADTRGLPLVHVKEIERIAAIHSNVADYRC--SERNEAAAFG----QE 181
Query: 94 RSVWRQTAFCFYKVRRATTKNTEKEETGL 8
V+ + V+R+ +E E+GL
Sbjct: 182 MEVFEDVEWSLVPVKRSKPARSEMSESGL 210
>Z75531-12|CAA99806.4| 348|Caenorhabditis elegans Hypothetical
protein C54D10.6 protein.
Length = 348
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 500 PTYEVSVYTIWSGQPWNRMFGNLTLIVMQ 586
P + VSVY I PWN +F ++V Q
Sbjct: 29 PLFLVSVYCILKKSPWNMVFYKWLILVFQ 57
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
Frame = +1
Query: 67 KMLSAARLIAPDSQVCHLLQLCTGATTC---SCT----HPYTDGTCCPYTALCSAV 213
K SA AP C + + CTG TC CT H DG C P A S V
Sbjct: 1428 KQKSAPAFAAP-GDTCSMREKCTGGATCFEGMCTCDDHHFAEDGYCRPIEARSSKV 1482
>Z72502-3|CAA96593.2| 218|Caenorhabditis elegans Hypothetical
protein C08B6.6 protein.
Length = 218
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 625 PVDAHCRCNTHQSLHHYEGEV 563
P+ CRCNT +LH EG V
Sbjct: 98 PIYVLCRCNTTNTLHRREGVV 118
>Z81477-7|CAB03927.2| 326|Caenorhabditis elegans Hypothetical
protein C27C7.4 protein.
Length = 326
Score = 27.5 bits (58), Expect = 9.6
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +1
Query: 106 QVCHLLQ---LCTGATTCS-CTHPYTDGTCCPYTALCSAVLPDHIGH*GH*LCCQIHWCW 273
QVCH + L G T+C+ C + Y +C+A I H C +
Sbjct: 16 QVCHSTERTRLYFGITSCAACAAFFRRSDGIRY--MCTATNSCTISHDMKFFCRACRYTS 73
Query: 274 CSDSGSSWFRSWYWNSLRLPHHRLCQEPLPQAAVVLIRHSGFR--LV*GHGSVLSY 435
C +G R+ + + P++ + +EP P++ L GF L +G +L Y
Sbjct: 74 CIRAGMVMSRNALATARKAPNNIIPREPTPRSVPSLEEVDGFSKILNISNGDLLKY 129
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 348 CECTNPLTDGYYCEY 362
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 348 CECTNPLTDGYYCEY 362
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -1
Query: 319 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELC 191
C NT TS S+C C + S + L P C++ C
Sbjct: 51 CHNTQQSTSASNCNCVLKSNSKSVPVTIKVSTKLCAPACQQSC 93
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 94 APDSQVCHLLQLCTGATTCSCTHPY-TDGTCC 186
A + C C G TTC C Y +G CC
Sbjct: 2145 ASNCSQCDANAHCVGGTTCKCNPGYFGNGLCC 2176
>AL022288-7|CAA18369.1| 326|Caenorhabditis elegans Hypothetical
protein ZK1025.10 protein.
Length = 326
Score = 27.5 bits (58), Expect = 9.6
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +1
Query: 106 QVCHLLQ---LCTGATTCS-CTHPYTDGTCCPYTALCSAVLPDHIGH*GH*LCCQIHWCW 273
QVCH + L G T+C+ C + Y +C+A I H C +
Sbjct: 16 QVCHSTERTRLYFGITSCAACAAFFRRSDGIRY--MCTATNSCTISHDMKFFCRACRYTS 73
Query: 274 CSDSGSSWFRSWYWNSLRLPHHRLCQEPLPQAAVVLIRHSGFR--LV*GHGSVLSY 435
C +G R+ + + P++ + +EP P++ L GF L +G +L Y
Sbjct: 74 CIRAGMVMSRNALATARKAPNNIIPREPTPRSVPSLEEVDGFSKILNISNGDLLKY 129
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 148 CSCTHPYTDGTCCPY 192
C CT+P TDG C Y
Sbjct: 348 CECTNPLTDGYYCEY 362
>AC006632-1|AAK85466.1| 311|Caenorhabditis elegans Hypothetical
protein F28A10.1 protein.
Length = 311
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 456 KSSRNAIIRQNRPMASDKAKPRMAYENNCCLREGFLA*PMMRE 328
KSSR I ++ + KP E N C+ + FLA PM E
Sbjct: 21 KSSRTLIQPKSSKIQLKSFKPTFFEEWNSCVAQKFLAIPMTAE 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,478,630
Number of Sequences: 27780
Number of extensions: 365528
Number of successful extensions: 1349
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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