Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P09
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040661-7|AAG24223.1|  439|Caenorhabditis elegans Hypothetical ...    33   0.33 
Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF025459-7|AAB70981.1|  132|Caenorhabditis elegans Hypothetical ...    29   4.1  
AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical ...    29   5.4  
AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine r...    29   5.4  
AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical...    29   5.4  
Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical p...    28   9.5  

>AF040661-7|AAG24223.1|  439|Caenorhabditis elegans Hypothetical
           protein W10G11.17 protein.
          Length = 439

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = -1

Query: 157 HVAIHTAEXRQXWXRRRPGESDEERPQRSALRLIDVKEEDGETTE 23
           HV + T + R+   R+R   SDEE  ++S+  +IDV ++ GE  E
Sbjct: 247 HVVLKT-KIRRRRRRKRAAGSDEEDEKKSSETVIDVHQDSGENDE 290


>Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical
           protein R06C1.2 protein.
          Length = 352

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 22/78 (28%), Positives = 37/78 (47%)
 Frame = +1

Query: 604 RTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXXNLPVSLGLLLXENVDEKIYK 783
           +T +GQ LD  + N+    SSFT DR                P+ + L++ + +    + 
Sbjct: 162 KTLIGQFLDTSSVNQ---ISSFTWDRYELMVENKTSHYTVFHPIQMALIISDVL--AYHG 216

Query: 784 SAQXICLEIGTMFQIQDD 837
           S + +  +IG +FQ QDD
Sbjct: 217 SVKKVAYQIGFLFQSQDD 234


>Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical
           protein F40F9.8 protein.
          Length = 137

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 349 NEKKMFDDLLPEVIMTLQNKSKLSEVPQ 432
           N +  FDDLLP V++ +QN+    + P+
Sbjct: 42  NGRVSFDDLLPRVVLAIQNEEWKDDTPK 69


>AF025459-7|AAB70981.1|  132|Caenorhabditis elegans Hypothetical
           protein H14A12.5 protein.
          Length = 132

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +1

Query: 217 IVDMSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTAS-KNLEIINEKKMFDDLLPE 384
           +VD+  FN  +F+ K+T +YW ++ R +N+S +    +   L+  N   + D+ LP+
Sbjct: 12  MVDLQTFNT-QFS-KITDRYWREIFRRQNDSHHPDHINVSRLQTANIITVLDENLPQ 66


>AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical
           protein Y51H4A.5 protein.
          Length = 498

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 416 NLDLFCSVIITSGRRSSNIFFSLIISRFFEAVVIFALLF 300
           NL+LF +   T   RS+ IFF+   +  F  +++F L+F
Sbjct: 141 NLELFFACFNTCIFRSNRIFFNSAANLNFATILVFFLIF 179


>AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine
           receptor, class z protein19 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 326 AVVIFALLFLYLISCGQYLYVTLRVNLRQLNTLMSTMS*SPMRW 195
           AVVI  +L   LI    +LY+ + +++R+L  L S    +P R+
Sbjct: 196 AVVINQILLHILIFVSGFLYIPIIISVRKLAHLASAQQNNPQRY 239


>AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical
           protein Y18H1A.9 protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/67 (20%), Positives = 30/67 (44%)
 Frame = +1

Query: 346 INEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTI 525
           I    M DD+   ++   + + KL +  ++ DW ++ + +NL        +   ++   I
Sbjct: 81  IKHSVMIDDVQKVIVEQKEKRDKLRKQVRLHDWREQKVQFNLAQYHSFADVINYLNSLAI 140

Query: 526 EKPEKVT 546
             PE V+
Sbjct: 141 TYPELVS 147


>Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical
           protein Y49E10.25 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 707 PHITPTIYPFPLVYYXLKMWMKK 775
           PH+ P I P PL ++  ++W  K
Sbjct: 296 PHVPPKIGPIPLFHHGTEIWYPK 318


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,351,932
Number of Sequences: 27780
Number of extensions: 392094
Number of successful extensions: 1131
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)