Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P08
         (373 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    20   7.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   9.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   9.4  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 248 KATSTEEQXFDLHHH 204
           K+T T    +DLHH+
Sbjct: 100 KSTITHLHIYDLHHN 114


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = +1

Query: 202 RWWCKSXNCSSVDV 243
           RW CKS  C    +
Sbjct: 26  RWECKSNYCQKAPI 39


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 247 RQHPLRSSXLICTTTG 200
           RQHP   S + C T G
Sbjct: 508 RQHPYIVSLIGCVTEG 523


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,490
Number of Sequences: 336
Number of extensions: 913
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)