Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_P07
(557 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 174 1e-42
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 146 2e-34
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 135 8e-31
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 124 1e-27
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 115 7e-25
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 112 6e-24
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 107 1e-22
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 103 3e-21
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 95 1e-18
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 89 9e-17
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 78 2e-13
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 73 3e-12
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 73 6e-12
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 69 7e-11
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 69 7e-11
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 69 1e-10
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 67 2e-10
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 63 4e-09
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 63 5e-09
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 57 2e-07
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 55 1e-06
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 55 1e-06
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 52 7e-06
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 52 7e-06
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 49 6e-05
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 47 3e-04
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 43 0.006
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 43 0.006
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.010
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 0.37
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 0.48
UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage ... 34 2.0
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 34 2.0
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 34 2.6
UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61; Bacter... 33 3.4
UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;... 33 4.5
UniRef50_Q8T0X1 Cluster: 18 wheeler precursor; n=1; Bombyx mori|... 33 4.5
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 33 4.5
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 33 6.0
UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q4Z6T0 Cluster: Putative uncharacterized protein; n=2; ... 33 6.0
UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24; ... 32 7.9
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 174 bits (423), Expect = 1e-42
Identities = 80/105 (76%), Positives = 94/105 (89%)
Frame = +2
Query: 149 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATAYVGIHPSKCVIVNLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
T +VGIHPSK VI LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 52 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 146 bits (355), Expect = 2e-34
Identities = 70/105 (66%), Positives = 88/105 (83%)
Frame = +2
Query: 149 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+NV+SMP +KDDEVQVVRGHY+GQQ+GKV+QVYRKK+V+YI++++REKANG
Sbjct: 33 PLSKELRQKYNVQSMPTQKDDEVQVVRGHYEGQQIGKVVQVYRKKYVIYIKQVEREKANG 92
Query: 329 ATAYVGIHPSKCVIVNLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
T VGIHPSK VI LK+ +DRK IL+R+ +GK+KGKY
Sbjct: 93 TTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +1
Query: 52 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS K HF+APSHI R +MSSPL
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPL 34
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 135 bits (326), Expect = 8e-31
Identities = 66/102 (64%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Frame = +2
Query: 164 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATA 337
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 338 YVGIHPSKCVIVNLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
+VGIHPSK VI LK++KDRK I +++AK A GK+KGKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 124 bits (300), Expect = 1e-27
Identities = 59/90 (65%), Positives = 75/90 (83%)
Frame = +2
Query: 194 PIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIV 373
P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T VGIHPSK V+
Sbjct: 58 PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVT 116
Query: 374 NLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
LK++KDRKAILDR+A GR A K KGK+
Sbjct: 117 KLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 115 bits (277), Expect = 7e-25
Identities = 56/100 (56%), Positives = 73/100 (73%)
Frame = +2
Query: 149 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P S ELR K+NV+SMPIRKDDEV VVRG KG++ GKV VYR K+ +++ERI R+K+NG
Sbjct: 34 PLSSELRAKYNVRSMPIRKDDEVMVVRGSNKGRE-GKVTSVYRLKWAIHVERISRDKSNG 92
Query: 329 ATAYVGIHPSKCVIVNLKMNKDRKAILDRRAKGRLAALGK 448
+ + +HPS VI L ++KDR+AIL+R KGR A K
Sbjct: 93 QSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
Score = 39.5 bits (88), Expect = 0.052
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 61 NKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
N + SS RK+R HF+APS RRV++S+PL
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPL 35
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 112 bits (269), Expect = 6e-24
Identities = 47/89 (52%), Positives = 71/89 (79%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
SKELR K+ +++P+RKDDEV + RGH G++ GKV+++ RK+F +Y+ER+ REKANG +
Sbjct: 64 SKELRLKYKTRALPVRKDDEVLICRGHNHGRE-GKVVKINRKRFKIYVERVTREKANGES 122
Query: 335 AYVGIHPSKCVIVNLKMNKDRKAILDRRA 421
++GIHPS ++ LK++K+RK ILDR+A
Sbjct: 123 TFIGIHPSNVILTKLKIDKNRKKILDRKA 151
Score = 49.2 bits (112), Expect = 6e-05
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = +1
Query: 49 RMKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
+MKFNKQ++S+ RK RK HF+AP+ +RR +MSS L
Sbjct: 29 KMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKL 63
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 107 bits (258), Expect = 1e-22
Identities = 49/95 (51%), Positives = 71/95 (74%)
Frame = +2
Query: 149 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELR ++ +K++PIR+DDEV VVRG KGQ+ GK+ VYR KF V ++++ +EK NG
Sbjct: 34 PLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE-GKISSVYRLKFAVQVDKVTKEKVNG 92
Query: 329 ATAYVGIHPSKCVIVNLKMNKDRKAILDRRAKGRL 433
A+ + +HPSK VI L ++KDRKA++ R+ G+L
Sbjct: 93 ASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
Score = 37.1 bits (82), Expect = 0.28
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 55 KFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
K + V+S RK RK +F+APS RRVL+S+PL
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPL 35
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 103 bits (247), Expect = 3e-21
Identities = 47/98 (47%), Positives = 71/98 (72%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
SK+LR+K+NV+++P+RKDDEV VVRG +KG + GKV VYRK++ + IE++ R KANG
Sbjct: 35 SKDLRKKYNVRALPVRKDDEVTVVRGTHKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMP 93
Query: 335 AYVGIHPSKCVIVNLKMNKDRKAILDRRAKGRLAALGK 448
+ I S+C+I +N+DRK +L R+A +++ GK
Sbjct: 94 YQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 95.1 bits (226), Expect = 1e-18
Identities = 45/92 (48%), Positives = 65/92 (70%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
SKELR+K+NV ++PI KDDEV++++GH K GKV V R K+V+ I+++ + KANG T
Sbjct: 35 SKELREKYNVIAIPIHKDDEVKIIKGHQK--VAGKVTAVRRSKYVINIDKLTKTKANGQT 92
Query: 335 AYVGIHPSKCVIVNLKMNKDRKAILDRRAKGR 430
V I PS +I L +NKDR+A L ++A+ R
Sbjct: 93 VPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
Score = 32.7 bits (71), Expect = 6.0
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 52 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN +V+S+ K RK ++AP+ R +LMS+ L
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARL 34
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 88.6 bits (210), Expect = 9e-17
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
+KE + VK +PIR+DDEV + G + G++ GKV+ V + + ++ REK NG T
Sbjct: 36 NKEQAETHGVKQLPIRRDDEVSINSGKFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQT 94
Query: 335 AYVGIHPSKCVIVNLKMNKDRKAILDRRAKGR---LAALGKDK 454
+V +HPS C+I LKM+K RK +++RR GR LA LG +K
Sbjct: 95 VHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = +2
Query: 104 ISVLLHI*GEC*CPLPCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKK 283
++ LLH E P S LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K
Sbjct: 36 LTPLLHGVIELLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQK 94
Query: 284 FVVYIERIQREK 319
V++++RI EK
Sbjct: 95 RVIHVKRISHEK 106
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 73.3 bits (172), Expect = 3e-12
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +2
Query: 149 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SK+L+++ ++ +P+R D V ++RG +KG + GKV +V K+ +Y++ +K +G
Sbjct: 32 PLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR-GKVTRVDYKRVRIYVDSASFKKPSG 90
Query: 329 ATAYVGIHPSKCVIVNL-KMNKDRKAILDRRAKGRLAALG 445
Y IHPSK VIV L + +K R A +D+ K R A G
Sbjct: 91 EAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 72.5 bits (170), Expect = 6e-12
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +2
Query: 161 ELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 340
ELR+KFN +S+P+R+ D V+++RG +KG + G+V++V K+ +Y+E E+ANG Y
Sbjct: 35 ELRKKFNRRSLPVRRGDMVRIMRGDFKGHE-GEVVEVDLKRLRIYVEGATIERANGEKVY 93
Query: 341 VGIHPSKCVIVNLKMNKD-RKAILDR 415
IHPS +I+ ++ R+ I++R
Sbjct: 94 YPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 68.9 bits (161), Expect = 7e-11
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
SKELR + +K+MPIR+ D V++ G +KG GKV++V R+ + + +E I ++ N
Sbjct: 35 SKELRAEHKIKTMPIRRGDIVEIFTGGHKG--TGKVVEVRRRDYKICVEGINQKARNPEA 92
Query: 335 AYV--GIHPSKCVIVNLKMNKDRKAILDRRAK---GRLAALGK 448
V IHPS C+I L MN R + RR + RLA +GK
Sbjct: 93 KPVPYPIHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 68.9 bits (161), Expect = 7e-11
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +2
Query: 149 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P S EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + R+KA+G
Sbjct: 9 PLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKADG 67
Query: 329 ATAYVGIHPSKCVIVNLKMNKD-RKAILDRRA 421
Y+ IH SK I L N RK I++R+A
Sbjct: 68 TPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/92 (40%), Positives = 52/92 (56%)
Frame = +2
Query: 149 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P S EL+QK +K + +RK D V +VRG +KG + GKV V KK +++E KA+G
Sbjct: 32 PLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHE-GKVTSVDVKKGRIHVEGATLRKADG 90
Query: 329 ATAYVGIHPSKCVIVNLKMNKDRKAILDRRAK 424
IHPSK V+ L ++ R+ L R K
Sbjct: 91 TEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
S++L +++ +K + IRK D V+++RG G + GKV++V RK+ V IE + ++KA+G
Sbjct: 30 SEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE-GKVVEVDRKRGRVAIEGLTKKKADGTP 88
Query: 335 AYVGIHPSKCVIVNLKM-NKDRKAILDRRAKGRLAALGKDKGK 460
YV +H SK +I L +K+R ++R+ K R K K
Sbjct: 89 VYVWVHASKVIITKLDTGDKERMDAIERKRKMREEYFSKKSPK 131
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 63.3 bits (147), Expect = 4e-09
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
S EL+ + ++PIR +DEV+V RG +K ++ GKV+QVYRKK+V++I I R+K NG
Sbjct: 54 SAELKAQHGANAVPIRVNDEVRVTRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
Score = 43.6 bits (98), Expect = 0.003
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +1
Query: 52 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
MK++ VTSS RK RK HF+APS RR LMS+ L
Sbjct: 20 MKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAAL 53
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 62.9 bits (146), Expect = 5e-09
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
SKEL++K ++P+RK D V+++RG +KG + G+V++V K++ +Y+E ++ +G
Sbjct: 33 SKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGRE 91
Query: 335 AYVGIHPSKCVIVNLKMNKDRK 400
IHPS +I+ L +KD K
Sbjct: 92 VPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
S+ELR+++ ++ P+R D V V G + G++ G + ++ + + VYIE K +G
Sbjct: 36 SRELRKEYGFRTFPLRTGDTVVVKGGKFDGKE-GVISKINYRDYKVYIEGCFVTKNDGTN 94
Query: 335 AYVGIHPSKCVIVNLKMNKDRKAILDRRAKGR 430
A V I+PSK I + RK L+R+ + R
Sbjct: 95 ALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
SK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E I K +G
Sbjct: 10 SKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGKQ 68
Query: 335 AYVGIHPSKCVIVNLKMNKDRK 400
GI P K I +L +++ +
Sbjct: 69 KGFGISPEKLQITHLDLSRSER 90
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKG 244
S ELR K+NV+S+PIRKDDEVQVVRG YKG
Sbjct: 35 SSELRHKYNVRSIPIRKDDEVQVVRGSYKG 64
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 52 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
MK N +VTSS RK RK HF+APS +RRVLMS+ L
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 52.4 bits (120), Expect = 7e-06
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
SK+L++K+ +S+ + + D V ++RG +KG GKV +V K V IE +++EK G
Sbjct: 28 SKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEKTKGDK 86
Query: 335 AYVGIHPSKCVIVNL 379
V IH S ++ +L
Sbjct: 87 FDVFIHTSNLLVTSL 101
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 52.4 bits (120), Expect = 7e-06
Identities = 33/77 (42%), Positives = 42/77 (54%)
Frame = +2
Query: 149 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELR K+ +S+ + + D V VVRG YK GKV V + V IE I++EK G
Sbjct: 26 PLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVSHVDTESGSVAIEGIKKEKGKG 84
Query: 329 ATAYVGIHPSKCVIVNL 379
V I SK V+ L
Sbjct: 85 DKFDVLIRASKVVVTGL 101
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 49.2 bits (112), Expect = 6e-05
Identities = 28/84 (33%), Positives = 52/84 (61%)
Frame = +2
Query: 149 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELR+K ++++PI+ D V+V RG+++G++ G+V+ + K + VY+ + ++
Sbjct: 44 PLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVIDIDPKYYRVYLS-LDTDR--- 98
Query: 329 ATAYVGIHPSKCVIVNLKMNKDRK 400
HPSK I+ L ++ D+K
Sbjct: 99 ---QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/75 (29%), Positives = 46/75 (61%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
SKE+++ K++ ++K+ E++V RG +KG + GKV+Q+ ++ ++++ I R K
Sbjct: 35 SKEMQKYHKKKTLILKKNYEIKVKRGDFKG-KTGKVIQIKPEQQKIFVDNIFRNKFEKTN 93
Query: 335 AYVGIHPSKCVIVNL 379
+V + PS I+ +
Sbjct: 94 IFVPLKPSNIQIIKI 108
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +1
Query: 52 MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSP 150
M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +2
Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
S+ L +++ +S + D V+++RG +KG + GKV V + ++ + K +G
Sbjct: 36 SEALAKQYGTRSAAVITGDTVKIMRGDFKGTE-GKVQSVSLMDGTIAVDGVISTKVDGTE 94
Query: 335 AYVGIHPSKCVIVNLKMNKDRKA 403
I+PS +I L+M R+A
Sbjct: 95 VPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 41.9 bits (94), Expect = 0.010
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 182 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 319
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVNVAK 45
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 0.37
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 191 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 307
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 0.48
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -1
Query: 506 YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 393
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage
phiV10|Rep: Putative acetyltransferase - Phage phiV10
Length = 338
Score = 34.3 bits (75), Expect = 2.0
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = -2
Query: 403 CFAVF-IHLQIDNHTL*RVNADICCCTIGLFSLNPL--NVYNKL----FTIHLHHFANL- 248
CF VF I+ + N T+ + I CT+G++ ++PL ++ + ++IH F +
Sbjct: 254 CFMVFMINTPVKNKTILHIVKFISPCTLGIYLVHPLIIDILRRFLLDKYSIHPEMFIVIP 313
Query: 247 LAFVVSTYNLNFIVFANRHG 188
L+F+V +L +VF + G
Sbjct: 314 LSFIVFLISLAIVVFLRKFG 333
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 34.3 bits (75), Expect = 2.0
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 185 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 319
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + K
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 33.9 bits (74), Expect = 2.6
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +2
Query: 197 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV 343
I+K D V VVRG KG+Q GKV++VY ER++R G YV
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVY--------ERVKRRDKQGNPVYV 45
>UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2137
Score = 33.5 bits (73), Expect = 3.4
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 176 FNVKSMPIRKDDEVQVVRGHY-KGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 340
+ V MP++ E +++G Y K Q + ++F Y+ER EKA+ A+ Y
Sbjct: 88 YTVNPMPLKPSPEKSLIKGQYHKRMQSFQNATTNSREFASYLERRSPEKAHRASVY 143
>UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61;
Bacteria|Rep: 50S ribosomal protein L24 - Streptomyces
coelicolor
Length = 107
Score = 33.5 bits (73), Expect = 3.4
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 191 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 319
M I+K D VQV+ G KG+Q GKV+ + ++ V +E + R K
Sbjct: 1 MKIKKGDLVQVITGKDKGKQ-GKVIAAFPREDRVLVEGVNRVK 42
>UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Transcriptional regulator, GntR family - Clostridium
beijerinckii NCIMB 8052
Length = 235
Score = 33.1 bits (72), Expect = 4.5
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 146 LPCSKELRQKFNVKSMPIRKDDEVQVVRGH-YKGQQVGKVMQVYRKKFVVYIERI 307
LP +EL +KFNV IRK E+ V +G+ Y+ Q G ++ + K I I
Sbjct: 27 LPTEEELIKKFNVSKNTIRKAIEILVTKGYVYRVQGSGIFLREFAKNGCAQIRDI 81
>UniRef50_Q8T0X1 Cluster: 18 wheeler precursor; n=1; Bombyx
mori|Rep: 18 wheeler precursor - Bombyx mori (Silk moth)
Length = 1295
Score = 33.1 bits (72), Expect = 4.5
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = -2
Query: 478 GSFLGVFTLVFAKCSQSALCSAIEDCFAVFIHLQIDNHTL*RVNADICCCTIGLFSLNPL 299
G+FLG+ L+ S +AL F LQI N + + L++L+ L
Sbjct: 306 GTFLGLIRLIVLNLSNNALTRVDGKTFKDLFVLQILNLKNNSIGYIEDNAFLPLYNLHTL 365
Query: 298 NV-YNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGF 185
N+ N+L TI + F L T N N +V +R F
Sbjct: 366 NLAENRLHTIDENLFNGLFVLSKLTLNNNLLVNIDRKAF 404
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 33.1 bits (72), Expect = 4.5
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 191 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 319
+ ++K DEV ++ G YKG++ GKV++V+ ++ V + + K
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGVNLVK 45
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 32.7 bits (71), Expect = 6.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 467 RCIYPCLCQVQPVCPLLCDRGLLCGLYSSSN*QSHTLKGECR 342
+C C +++ +CPL+C + L CG + + H KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKCEQ-RCH--KGRCQ 690
>UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 96
Score = 32.7 bits (71), Expect = 6.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 298 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVF 203
NVY +F +HLH F NLL + Y L+ +VF
Sbjct: 7 NVYILMFFVHLHLFVNLLNSMRGLYFLSVLVF 38
>UniRef50_Q4Z6T0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 663
Score = 32.7 bits (71), Expect = 6.0
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = -2
Query: 451 VFAKCSQSALCSAIEDCFAVFIHLQIDNHTL*RVNADICCCTIGLFSLNPLNVYNKLFTI 272
+F S S +++ I QI+ + L ++N++ TI LF L ++N LF
Sbjct: 572 IFIISSISMFMASLSYIIEQIITEQININILDKINSNTL--TIFLFCNITLGIFNILFQS 629
Query: 271 HLHHFANLLAFVVSTYNLNFIVFAN 197
L+ L F++ Y+L F++FAN
Sbjct: 630 LLYPLV-LAIFILILYSLFFLIFAN 653
>UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24;
n=6; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L24 - Guillardia theta (Cryptomonas phi)
Length = 101
Score = 32.3 bits (70), Expect = 7.9
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 191 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 307
M I++ D+VQV+ G YKG ++ +V++V RK + ++ I
Sbjct: 1 MTIKQGDKVQVIAGSYKG-EITEVLKVIRKSNSLILKNI 38
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,541,728
Number of Sequences: 1657284
Number of extensions: 9975802
Number of successful extensions: 25716
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 24878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25680
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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