Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P07
         (557 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0263 + 2136858-2137331                                          143   1e-34
12_01_0323 - 2459854-2460306                                          142   2e-34
11_01_0317 - 2365493-2365786,2365825-2365953                          106   1e-23
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917...    27   7.7  

>01_01_0263 + 2136858-2137331
          Length = 157

 Score =  143 bits (346), Expect = 1e-34
 Identities = 68/103 (66%), Positives = 87/103 (84%)
 Frame = +2

Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
           S ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T
Sbjct: 35  SSELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGST 93

Query: 335 AYVGIHPSKCVIVNLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
             VGIHPSK V+  LK++KDRKAILDR+A+GR  A  K KGK+
Sbjct: 94  VNVGIHPSKVVVTKLKLDKDRKAILDRKARGR--AADKAKGKF 134



 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 52  MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
           MK N +VTSS RK RK HF+APS +RRVLMS+ L
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34


>12_01_0323 - 2459854-2460306
          Length = 150

 Score =  142 bits (343), Expect = 2e-34
 Identities = 68/103 (66%), Positives = 86/103 (83%)
 Frame = +2

Query: 155 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 334
           S ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T
Sbjct: 35  STELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGST 93

Query: 335 AYVGIHPSKCVIVNLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
             VGIHPSK V+  LK++KDRKAILDR+A GR  A  K KGK+
Sbjct: 94  VNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 134



 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 52  MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
           MK N +VTSS RK RK HF+APS +RRVLMS+ L
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34


>11_01_0317 - 2365493-2365786,2365825-2365953
          Length = 140

 Score =  106 bits (254), Expect = 1e-23
 Identities = 51/81 (62%), Positives = 66/81 (81%)
 Frame = +2

Query: 221 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVNLKMNKDRK 400
           VVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T  VGIHPSK V+  LK++KDRK
Sbjct: 44  VVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRK 102

Query: 401 AILDRRAKGRLAALGKDKGKY 463
           AILDR+A GR  A  K KGK+
Sbjct: 103 AILDRKASGR--AADKAKGKF 121



 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 52  MKFNKQVTSSXRKNRKRHFSAPSHIRRVLMSSPL 153
           MK N +VTSS RK RK HF+APS +RRVLMS+ L
Sbjct: 1   MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34


>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
            26892215-26892266,26893530-26893795,26894007-26894229,
            26895154-26895327,26895408-26895485,26895566-26895817,
            26896138-26898204,26899477-26901322,26901474-26901574,
            26902179-26902535,26902681-26902799,26903558-26903559,
            26903630-26903662,26903709-26903841,26904285-26904537,
            26905688-26905912,26906401-26906466,26907373-26907471,
            26908528-26908545,26908546-26908893,26909878-26910354
          Length = 2522

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 161  ELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 307
            E   KF   + P  K D +Q+V  + + QQ    + V  K+F +YI  +
Sbjct: 1278 ETTWKFLATTNPYEKVDRLQIVSEYMEIQQTDGHVDVSAKEFKMYISSL 1326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,445,354
Number of Sequences: 37544
Number of extensions: 284126
Number of successful extensions: 679
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)