Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P05
         (587 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7EE5 Cluster: PREDICTED: similar to CG17593-PA...    49   7e-05
UniRef50_UPI0000E4920D Cluster: PREDICTED: similar to Coiled-coi...    48   1e-04
UniRef50_Q9VQR9 Cluster: CG17593-PA; n=7; Endopterygota|Rep: CG1...    48   1e-04
UniRef50_UPI00015B4FBA Cluster: PREDICTED: similar to CG17593-PA...    46   5e-04
UniRef50_A7RYA4 Cluster: Predicted protein; n=1; Nematostella ve...    42   0.014
UniRef50_Q96A33 Cluster: Coiled-coil domain-containing protein 4...    36   0.93 
UniRef50_Q3L7I2 Cluster: Putative uncharacterized protein; n=2; ...    33   6.5  

>UniRef50_UPI0000DB7EE5 Cluster: PREDICTED: similar to CG17593-PA,
           partial; n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG17593-PA, partial - Apis mellifera
          Length = 388

 Score = 49.2 bits (112), Expect = 7e-05
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = +3

Query: 387 HFQDPEEFEGFQ----ETTPRTMEQPKITISKVPITARPRWDAYWLEGIXXXXXXXXXXX 554
           HFQD EEFEG         P+  E   +TI+K+P+  R RWD+++LE +           
Sbjct: 81  HFQDEEEFEGLDAAGGNAGPKNDEPSTLTITKIPLHLRARWDSFYLEILTIIGLLVYFIN 140

Query: 555 XXIGRAXNTSI 587
              GR+ N  I
Sbjct: 141 YIAGRSKNAHI 151


>UniRef50_UPI0000E4920D Cluster: PREDICTED: similar to Coiled-coil
           domain containing 47; n=2; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to Coiled-coil domain
           containing 47 - Strongylocentrotus purpuratus
          Length = 481

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +3

Query: 387 HFQDPEEFEGFQETTPRTM--EQPKITISKVPITARPRWDAYWLE 515
           HFQD EEFE F+E   +    E P + I+KVP+  R  WD+Y+LE
Sbjct: 99  HFQDTEEFENFEERPAKGKGKEAPDLEITKVPLHLRNSWDSYYLE 143


>UniRef50_Q9VQR9 Cluster: CG17593-PA; n=7; Endopterygota|Rep:
           CG17593-PA - Drosophila melanogaster (Fruit fly)
          Length = 476

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +3

Query: 387 HFQDPEEFEGFQ--ETTPRTMEQ---PKITISKVPITARPRWDAYWLEGIXXXXXXXXXX 551
           HFQD EEFEG+   ++    ++Q   PK+ I  +P+  R  WD+YW+E +          
Sbjct: 96  HFQDEEEFEGYDGGDSKDPPIDQKVEPKLNIPNIPLHFRTHWDSYWMEMLMVAGLLAYFA 155

Query: 552 XXXIGRAXNTSI 587
               G+A N  +
Sbjct: 156 NFFAGKAKNARL 167


>UniRef50_UPI00015B4FBA Cluster: PREDICTED: similar to CG17593-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG17593-PA - Nasonia vitripennis
          Length = 470

 Score = 46.4 bits (105), Expect = 5e-04
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = +3

Query: 387 HFQDPEEFEGFQETTPRT---MEQPK-ITISKVPITARPRWDAYWLEGIXXXXXXXXXXX 554
           HFQD EEFEG       +   +++P  +TI+KVP+  R RWD+++LE +           
Sbjct: 84  HFQDEEEFEGLDAPNGNSDAKIDEPSTLTITKVPLHLRARWDSFYLEILMIAGLLVYFFN 143

Query: 555 XXIGRAXNTSI 587
              G++ N+ I
Sbjct: 144 YIAGKSKNSRI 154


>UniRef50_A7RYA4 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 406

 Score = 41.5 bits (93), Expect = 0.014
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = +3

Query: 387 HFQDPEEFEGFQE----TTPRTMEQPKITISKVPITARPRWDAYWLEGIXXXXXXXXXXX 554
           HF D EEFEG+ +       +   QP + I KVP+  R  W+ +++E +           
Sbjct: 21  HFTDEEEFEGYHKGEKPVKGKPGPQPDLKIEKVPLHLRANWEGFYVEILTLAGLAAYALN 80

Query: 555 XXIGRAXNTSI 587
              GR  N+ +
Sbjct: 81  FFAGRTKNSKL 91


>UniRef50_Q96A33 Cluster: Coiled-coil domain-containing protein 47
           precursor; n=32; Euteleostomi|Rep: Coiled-coil
           domain-containing protein 47 precursor - Homo sapiens
           (Human)
          Length = 483

 Score = 35.5 bits (78), Expect = 0.93
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +3

Query: 396 DPEEFEGFQET--TPRTMEQPKITISKVPITARPRWDAYWLEGIXXXXXXXXXXXXXIGR 569
           D EEFEG+++   T  +  +  ITI  VP   +  W++Y+LE +             IG+
Sbjct: 98  DDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLEILMVTGLLAYIMNYIIGK 157

Query: 570 AXNTSI 587
             N+ +
Sbjct: 158 NKNSRL 163


>UniRef50_Q3L7I2 Cluster: Putative uncharacterized protein; n=2;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 94

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -3

Query: 135 SAFCTCIWFLAFLILITNS-INKRLLIFSYINY 40
           S +C C +++AFL+L +N  I K +L+ S INY
Sbjct: 23  SGYCVCFYWMAFLLLPSNRIIIKFILLTSLINY 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,040,344
Number of Sequences: 1657284
Number of extensions: 6907853
Number of successful extensions: 19980
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19973
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)