Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P05
         (587 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35604-4|CAA84678.1|  442|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U23168-9|AAC38805.1|  196|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81570-6|CAB04607.2|  725|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AY887911-1|AAX34423.1|  737|Caenorhabditis elegans anion transpo...    28   4.3  

>Z35604-4|CAA84678.1|  442|Caenorhabditis elegans Hypothetical
           protein ZK1058.4 protein.
          Length = 442

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = +3

Query: 393 QDPEEFEGFQE--TTPRTMEQPKITISKVPITARPRWDAYWLEGIXXXXXXXXXXXXXIG 566
           ++PEE E  +E  +      QP +  + VP   R  W +Y +EGI             IG
Sbjct: 66  EEPEEAEKVREADSDDAAPAQP-LKFADVPAHFRSNWASYQVEGIVVLIILIYMTNYLIG 124

Query: 567 RAXNTSI 587
           +  N SI
Sbjct: 125 KTTNASI 131


>U23168-9|AAC38805.1|  196|Caenorhabditis elegans Hypothetical
           protein B0228.1 protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 441 MEQPKITISKVPITARPR 494
           ME   +TISKVPI+ RPR
Sbjct: 1   MENASVTISKVPISHRPR 18


>Z81570-6|CAB04607.2|  725|Caenorhabditis elegans Hypothetical
           protein K12G11.2 protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 162 REIQSIEMLSAFCTCIWFLAFLILITNSINKRLLI 58
           R+++ I  LS    CIW +AF   +   +++ LLI
Sbjct: 467 RDLKGIWKLSKIDCCIWMVAFFATVLVDVSEGLLI 501


>AY887911-1|AAX34423.1|  737|Caenorhabditis elegans anion
           transporter SULP-5 protein.
          Length = 737

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 162 REIQSIEMLSAFCTCIWFLAFLILITNSINKRLLI 58
           R+++ I  LS    CIW +AF   +   +++ LLI
Sbjct: 479 RDLKGIWKLSKIDCCIWMVAFFATVLVDVSEGLLI 513


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,216,508
Number of Sequences: 27780
Number of extensions: 164691
Number of successful extensions: 531
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)