Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_P04
(487 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 104 1e-21
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 103 3e-21
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 101 7e-21
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 92 7e-18
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 58 1e-07
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 58 1e-07
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 50 3e-05
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 37 0.28
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.37
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 34 2.0
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 34 2.0
UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n... 32 6.0
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_UPI0001554C3B Cluster: PREDICTED: similar to FLJ00040 p... 32 7.9
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 32 7.9
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 104 bits (249), Expect = 1e-21
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +3
Query: 87 GRTAKNVNATKYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVL 266
G+ K+ N K T+Y K ++ + RRRYDRKQ G+GGQ+KPIF IVL
Sbjct: 14 GKCRKHTNH-KVTQY---KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVL 69
Query: 267 RLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 374
R+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 70 RMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
Score = 31.9 bits (69), Expect = 7.9
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 62 MVNVPKQRRTY-XXXXXXXXXXXXSQYKKSKERHAAQG 172
MVNVPK RRT+ +QYKK KE AQG
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQG 38
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 103 bits (246), Expect = 3e-21
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +3
Query: 117 KYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 290
K T+Y K + + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 291 VRSQVALKRCKHFELGGDKKRKGQMIQF 374
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 62 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 172
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 101 bits (243), Expect = 7e-21
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +3
Query: 117 KYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 290
K T+Y K + + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 291 VRSQVALKRCKHFELGGDKKRKGQMIQF 374
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 62 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 172
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 91.9 bits (218), Expect = 7e-18
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +3
Query: 99 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 272
K+ K+T + T K + + +RRYDRKQ GYGGQ+KP+F IVLRL
Sbjct: 59 KSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRL 118
Query: 273 ECADCKVRSQVALKRCKHFELGGDKKRKG 359
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 119 QCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 147 PRKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 323
P K +L + +RRYDRKQQGYGGQ+KP+F ++L C CK +LKR K
Sbjct: 28 PGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTK 87
Query: 324 HFEL 335
F++
Sbjct: 88 RFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +3
Query: 174 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 353
RRRYDRKQ+G+GG+ KPI I LR C CK + L R + FE +KK+
Sbjct: 38 RRRYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKK 97
Query: 354 K 356
K
Sbjct: 98 K 98
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3
Query: 258 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 359
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 50.0 bits (114), Expect = 3e-05
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 174 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 320
+RRYDRKQQG+GGQ+KP+F + ++EC CK+ + C
Sbjct: 22 KRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRESTC 69
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 43.6 bits (98), Expect = 0.002
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = +1
Query: 166 PGXEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLSVLIAR*DHRLH*RDASTLSLVVT 345
P D ++ VTVV P+ SS RR +P R+L SV S L AR DAST S VVT
Sbjct: 42 PKESDDTTESNPVTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVT 101
Query: 346 R 348
R
Sbjct: 102 R 102
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 36.7 bits (81), Expect = 0.28
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +3
Query: 132 HSTKSPRK---GTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQ 302
HS + RK L +RR+ R GYGG +P F I LRL C +C
Sbjct: 20 HSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHKAIT 79
Query: 303 VALKRCKHFEL 335
R K FE+
Sbjct: 80 PPGIRAKKFEI 90
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 0.37
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 306 ALKRCKHFELGGDKKRKG 359
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 33.9 bits (74), Expect = 2.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 177 RRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFE 332
RR+ ++GYGGQ P + L C DCK + R K FE
Sbjct: 38 RRHAEDKKGYGGQKFPKLAKPAKVTKKVTRLLTCPDCKKKFNTYGLRVKKFE 89
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 33.9 bits (74), Expect = 2.0
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +3
Query: 141 KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 320
++ ++ + RRY RKQ+GYG Q +P VL + C C + R
Sbjct: 26 RAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVCGRKRPFLGIRL 85
Query: 321 KHFEL 335
K EL
Sbjct: 86 KRLEL 90
>UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -2
Query: 156 LSLDFLYCDTLCTLWHLHFLQYVLRCFGTF 67
L+L LYC TLC LH LQ V FGT+
Sbjct: 5 LALPVLYCVTLCAECFLHPLQNVFLDFGTY 34
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 6.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 143 FCTVIPCVLCGIYIFCSTSC 84
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_UPI0001554C3B Cluster: PREDICTED: similar to FLJ00040
protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to FLJ00040 protein - Ornithorhynchus anatinus
Length = 1648
Score = 31.9 bits (69), Expect = 7.9
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +1
Query: 67 ERTKTAQDVLQKM*MPQSTQGITVQKVQGKARC-----PGXEDVMIVNSRVTVVSPNPSS 231
ERTK +QDV K P+ +GI QK+Q + PG IV+ NP+
Sbjct: 460 ERTKRSQDVNTKD--PKERRGI--QKLQSFYQLLGQSMPGSRSTRIVSQVAVATKANPAD 515
Query: 232 KRRQKPLRKLCSVLS 276
K++ K RK +++
Sbjct: 516 KKKAKLPRKKADIIA 530
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 31.9 bits (69), Expect = 7.9
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 370 WIICPFLFL---SPPSSKCLHLFNATCDLTLQSAHSRRS 263
WI+C FL L S PS +CLHL C L SA + S
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPCSLQSGSALKQAS 253
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,582,452
Number of Sequences: 1657284
Number of extensions: 6626301
Number of successful extensions: 17368
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 16993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17359
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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