Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P01
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.3  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.3  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 251 TGNGNHSPSGGQNAHL 298
           +G+GN+ P GG ++H+
Sbjct: 529 SGSGNNQPPGGPSSHV 544


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 209 LSGSSAVFLALLTS 250
           LSG+SAVF+ L+ S
Sbjct: 88  LSGNSAVFIMLIIS 101


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 268 VVTVARGCQQCQEHSRATAEL 206
           V+ +  GC     +SR TAE+
Sbjct: 225 VILIIMGCDVVASNSRKTAEM 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,318
Number of Sequences: 336
Number of extensions: 2684
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)