Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_P01
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   4.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.9  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   7.8  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = -2

Query: 573 YDMLKIVMLHVH*NSIGLCLRHFSKWAVLRCDVICGHSNTAV*VRSRCQLQIITFSSLRN 394
           +  +K+  + +  +S+ +CL   S    +R  V  GHS   + V+  C L  IT   + N
Sbjct: 315 HSQMKVTKMLLIVSSVFVCLNLPSYVMRVRAFVETGHSYLTILVQYYCYLFFITNFGI-N 373

Query: 393 FI 388
           FI
Sbjct: 374 FI 375


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -2

Query: 279 PDGEWLPLPVDVSNARNTAELP--LSYFKSQQL*RAAFADGTSDV 151
           P+G W+P     +  R+T  LP  LS    +   RA      SD+
Sbjct: 164 PNGPWIPYQYYSATCRDTYGLPDSLSVMNGEDESRALCTSEYSDI 208


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 209 LSGSSAVFLALLTSTGNGNHSPSG-GQNAHLP 301
           L+GSS VFL ++T+   G   PS  G   ++P
Sbjct: 341 LTGSSNVFLPVVTAPLPGPSPPSSLGMPGNIP 372


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,497
Number of Sequences: 2352
Number of extensions: 11273
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)