Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_O15
(825 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 27 0.24
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 23 2.2
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 23 3.9
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 23 3.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 6.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 6.8
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.0
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.0
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.0
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 26.6 bits (56), Expect = 0.24
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 249 TVLTTHVLDLNKKTMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIV 389
TV +H+L L+ +TM+YAQ + G S K+A+ S++IV
Sbjct: 177 TVTPSHLLVLDDRTMKYAQKL----QPGDFLLVSDNAKNALISEKIV 219
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -3
Query: 247 YIFLLERIGYFCIAACFLIASLSFLNFELQDVFCKLYYCYSQIYKIL 107
++F+L CI + F + L DV+ L + + QI +IL
Sbjct: 237 FLFVLSTFS-ICITQFYYCYDSGFNSDNLTDVYFTLQWAFLQILEIL 282
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 211 IAACFLIASLSFLNFELQDVFCKLYYC-YSQIY 116
I F + L + + +FC LY+C + IY
Sbjct: 234 IQTIFSVPLLMKIASQFVGIFCSLYFCIFGYIY 266
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 211 IAACFLIASLSFLNFELQDVFCKLYYC-YSQIY 116
I F + L + + +FC LY+C + IY
Sbjct: 59 IQTIFSVPLLMKIASQFVGIFCSLYFCIFGYIY 91
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 220 YFCIAACFLIASL 182
+FC+AA F+IA+L
Sbjct: 981 FFCMAAEFIIAAL 993
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 220 YFCIAACFLIASL 182
+FC+AA F+IA+L
Sbjct: 981 FFCMAAEFIIAAL 993
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 320 SRKWKVNILLYNS--ETCNG-FQTH 385
++ WK ++L+YNS E +G FQT+
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTN 107
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 320 SRKWKVNILLYNS--ETCNG-FQTH 385
++ WK ++L+YNS E +G FQT+
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTN 107
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 320 SRKWKVNILLYNS--ETCNG-FQTH 385
++ WK ++L+YNS E +G FQT+
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTN 107
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 320 SRKWKVNILLYNS--ETCNG-FQTH 385
++ WK ++L+YNS E +G FQT+
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTN 107
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +2
Query: 320 SRKWKVNILLYNS--ETCNG-FQTH 385
++ WK ++L+YNS E +G FQT+
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTN 107
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 561 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLV 659
+E + D + + LF P + LYT + + LV
Sbjct: 93 DEPIDDYEPSFDLFYYPSRQTLYTPVQYFKDLV 125
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,301
Number of Sequences: 336
Number of extensions: 4366
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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