Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_O05
         (786 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82266-15|CAD36491.1|  608|Caenorhabditis elegans Hypothetical p...    32   0.40 
Z82266-14|CAD36490.1|  467|Caenorhabditis elegans Hypothetical p...    32   0.40 
Z82266-10|CAJ80811.1|  331|Caenorhabditis elegans Hypothetical p...    32   0.40 
Z68213-9|CAD37352.1|  608|Caenorhabditis elegans Hypothetical pr...    32   0.40 
Z68213-8|CAA92439.3|  467|Caenorhabditis elegans Hypothetical pr...    32   0.40 
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/...    28   6.6  
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/...    28   6.6  
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    28   8.7  
U23510-3|AAC46782.1|  340|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>Z82266-15|CAD36491.1|  608|Caenorhabditis elegans Hypothetical
           protein C01F6.6b protein.
          Length = 608

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +2

Query: 236 VVLGAEEEKRPPPDDDKEMLSLSSDTGPHREMAVDVPDS 352
           V + +  E  PP DD   + SLSS    HRE AVDVP S
Sbjct: 483 VTMSSHTEVLPPTDDISSVSSLSS----HRESAVDVPVS 517


>Z82266-14|CAD36490.1|  467|Caenorhabditis elegans Hypothetical
           protein C01F6.6a protein.
          Length = 467

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +2

Query: 236 VVLGAEEEKRPPPDDDKEMLSLSSDTGPHREMAVDVPDS 352
           V + +  E  PP DD   + SLSS    HRE AVDVP S
Sbjct: 342 VTMSSHTEVLPPTDDISSVSSLSS----HRESAVDVPVS 376


>Z82266-10|CAJ80811.1|  331|Caenorhabditis elegans Hypothetical
           protein C01F6.6e protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +2

Query: 236 VVLGAEEEKRPPPDDDKEMLSLSSDTGPHREMAVDVPDS 352
           V + +  E  PP DD   + SLSS    HRE AVDVP S
Sbjct: 206 VTMSSHTEVLPPTDDISSVSSLSS----HRESAVDVPVS 240


>Z68213-9|CAD37352.1|  608|Caenorhabditis elegans Hypothetical
           protein C01F6.6b protein.
          Length = 608

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +2

Query: 236 VVLGAEEEKRPPPDDDKEMLSLSSDTGPHREMAVDVPDS 352
           V + +  E  PP DD   + SLSS    HRE AVDVP S
Sbjct: 483 VTMSSHTEVLPPTDDISSVSSLSS----HRESAVDVPVS 517


>Z68213-8|CAA92439.3|  467|Caenorhabditis elegans Hypothetical
           protein C01F6.6a protein.
          Length = 467

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +2

Query: 236 VVLGAEEEKRPPPDDDKEMLSLSSDTGPHREMAVDVPDS 352
           V + +  E  PP DD   + SLSS    HRE AVDVP S
Sbjct: 342 VTMSSHTEVLPPTDDISSVSSLSS----HRESAVDVPVS 376


>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 2, isoform
           c protein.
          Length = 1510

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 347 PAHPPPSRGG-DRYQKKARASLCRHPGAGVSP 255
           P  PPPS    D Y+  +R+SL RH     SP
Sbjct: 349 PTEPPPSYSREDPYRSTSRSSLSRHRNRSRSP 380


>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 2, isoform
           a protein.
          Length = 1507

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 347 PAHPPPSRGG-DRYQKKARASLCRHPGAGVSP 255
           P  PPPS    D Y+  +R+SL RH     SP
Sbjct: 349 PTEPPPSYSREDPYRSTSRSSLSRHRNRSRSP 380


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 204 KGPEDDPAPASWCWALRRRN 263
           K P  +P+   WCW LR R+
Sbjct: 118 KAPTTEPSDDLWCWQLRSRS 137


>U23510-3|AAC46782.1|  340|Caenorhabditis elegans Hypothetical
           protein R12C12.3 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 276 MTTKRCSRFLLIPVPTARWRWMCRTVSS 359
           M TK CS +L++ +   RW  +CR + +
Sbjct: 98  MMTKSCSLYLMVLITIERWIAVCRPLQA 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,786,508
Number of Sequences: 27780
Number of extensions: 363157
Number of successful extensions: 1148
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)