Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_O05
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.2  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   5.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 242  LGAEEEKRPPPDDDKEMLSLSSDTGPHR 325
            L  E+  RP   DD   L+L  + GP R
Sbjct: 1053 LSMEKGTRPMIPDDNTSLALPKNEGPFR 1080


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 673 SMTPTKTISAMTRPNFTQSLIIKK 744
           S+ PT T S  T P+ T S  I +
Sbjct: 377 SLVPTTTASPTTEPSTTTSTTISQ 400


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 211 PKTIRLQHRGAGR*GG 258
           P+  RL+H+G G  GG
Sbjct: 134 PQKYRLRHKGDGSPGG 149


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 211 PKTIRLQHRGAGR*GG 258
           P+  RL+H+G G  GG
Sbjct: 134 PQKYRLRHKGDGSPGG 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,281
Number of Sequences: 438
Number of extensions: 4653
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)