BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_O04
(821 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormo... 25 3.7
AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled ... 25 3.7
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 24 4.9
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 24 6.5
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 24 6.5
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 8.6
>DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormone
receptor protein.
Length = 354
Score = 24.6 bits (51), Expect = 3.7
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +1
Query: 562 IHRKHTKMLLKSARRK-CSPH 621
+ +KHTK LLK+ K C H
Sbjct: 329 VRKKHTKKLLKTTHEKSCGSH 349
>AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled
receptor protein.
Length = 354
Score = 24.6 bits (51), Expect = 3.7
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +1
Query: 562 IHRKHTKMLLKSARRK-CSPH 621
+ +KHTK LLK+ K C H
Sbjct: 329 VRKKHTKKLLKTTHEKSCGSH 349
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 24.2 bits (50), Expect = 4.9
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 306 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 479
W+V+ ++ + K + + +V K C V L+D LI K NP+ V
Sbjct: 274 WKVMKDVKDFIKLLLHKAFIVENQPPQVMKMNTRFCASVRLLIDNALIMKIGNPKVTV 331
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 6.5
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 194 HGGRDEGSDGNRRRT*QRGEEPPFSC 271
HGG D D + EE PF C
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEELPFKC 247
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 6.5
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 194 HGGRDEGSDGNRRRT*QRGEEPPFSC 271
HGG D D + EE PF C
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEELPFKC 247
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.4 bits (48), Expect = 8.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 687 LANLISHNKRLRNLTPDPALWGVWA 613
LAN + N+ R T + ++GVWA
Sbjct: 16 LANEFNPNRGRRRPTKNQQIYGVWA 40
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,717
Number of Sequences: 2352
Number of extensions: 16780
Number of successful extensions: 80
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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