Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_O02
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 217 2e-57
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 140 2e-34
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 111 1e-25
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 107 2e-24
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 97 2e-21
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 94 2e-20
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 87 4e-18
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 85 8e-18
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 85 1e-17
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 84 2e-17
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 81 1e-16
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 80 3e-16
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 77 3e-15
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 74 2e-14
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 74 3e-14
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 71 1e-13
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 68 2e-12
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 54 3e-08
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 29 0.77
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 28 1.3
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 27 2.4
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 27 3.1
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 4.1
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 26 5.4
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 5.4
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 26 7.2
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 26 7.2
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 217 bits (530), Expect = 2e-57
Identities = 95/179 (53%), Positives = 141/179 (78%)
Frame = +1
Query: 139 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 318
+REYK+VV+G GGVGKSALT+Q +Q FV++YDPTIEDSYRK+ E+DG+ +L++LDTAG
Sbjct: 6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAG 65
Query: 319 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDL 498
E+++AMR+ YM+ G+GF+LVY+IT++S+F+++ +QILRVKD P+VLV NK DL
Sbjct: 66 QEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 499 EAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKKSPKKDEHKPNKR 675
EAERVV + +G+ LA+ +C ++ETSAK +++V + FY LVR I + + +++ NK+
Sbjct: 126 EAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEKGFQNKQ 184
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 140 bits (339), Expect = 2e-34
Identities = 69/168 (41%), Positives = 112/168 (66%)
Frame = +1
Query: 139 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 318
++ +I VLGS VGKS+LTVQ+V+ FVE Y PTIE+++ K ++ GQ+ EI+DTAG
Sbjct: 4 IKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAG 63
Query: 319 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDL 498
++++ + + G+VLVYSIT++S+F ++ +R++IL T VP+V+VGNK+DL
Sbjct: 64 QDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDL 123
Query: 499 EAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKKS 642
+R V E+G+ LA + CA+ E SA+ +V F ++ +I K++
Sbjct: 124 HMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEIEKQA 171
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 111 bits (267), Expect = 1e-25
Identities = 55/164 (33%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQ 327
K++++G GVGKS L ++F + F + TI ++ + +E+DG++ L+I DTAG E+
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 328 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEAE 507
F + Y + G +L+Y +T + +F++++ + + + +V +L+GNK D E +
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ-HASENVYKILIGNKCDCEDQ 129
Query: 508 RVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKK 639
R V EQGQ LA F+E SAK ++V++ F+ L R+I K+
Sbjct: 130 RQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQ 173
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 107 bits (256), Expect = 2e-24
Identities = 55/165 (33%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
Frame = +1
Query: 148 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 324
+K++++G GVGKS L ++F + E Y TI ++ + E++G+ L+I DTAG E
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 325 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEA 504
+F + Y + G ++VY +T Q +FN+++ ++I R V +LVGNK+D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA-VEGVNRLLVGNKSDMVD 127
Query: 505 ERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKK 639
++VV + A N F+ETSAK +V F + RQI ++
Sbjct: 128 KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKER 172
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 97.5 bits (232), Expect = 2e-21
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
Frame = +1
Query: 139 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTA 315
+R++K+V LG VGK++L +F+ F Y TI D K + ++ + L++ DTA
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 316 GTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTD 495
G E+F ++ Y+++ ++VY IT ++F + + E + R + DV +VLVGNKTD
Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDV-RAERGDDVIIVLVGNKTD 127
Query: 496 LEAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQI 630
L +R V +E+G+ A+ METSAKA +V +F + + +
Sbjct: 128 LADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQML 172
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 94.3 bits (224), Expect = 2e-20
Identities = 54/162 (33%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Frame = +1
Query: 148 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 324
+K V++G GVGKS L ++F + F + TI + + + +D ++ +I DTAG E
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 325 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEA 504
++ A+ Y + G ++VY IT QS+F+++ ++ LR +++ ++LVGNKTDL
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKE-LREHADSNIVIMLVGNKTDLLH 129
Query: 505 ERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQI 630
R V E+ Q A N +F+ETSA +V + F ++ +I
Sbjct: 130 LRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 86.6 bits (205), Expect = 4e-18
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 15/195 (7%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 330
K+V++G G GK+ L + F +G F E Y PT+ ++Y VEVDG+ L + DTAG E +
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDY 67
Query: 331 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQD-LREQILRVKDTTDVPMVLVGNKTDLE-- 501
+R L + ++ +S+ A + +++Q+ ++L +++P++LVG K DL
Sbjct: 68 DRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHF--CSNLPILLVGCKVDLRND 125
Query: 502 ----------AERVVGKEQGQNLARHFNC-AFMETSAKAKIHVNDVFYDLVR-QINKKSP 645
+++ + E+GQ +A+ ++E SAK VN+VF R + K P
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAARASMLKFKP 185
Query: 646 KKDEHKPNKRKCIIL 690
K+ CI+L
Sbjct: 186 ASVPKTKKKKHCILL 200
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 85.4 bits (202), Expect = 8e-18
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDGQQCM-LEILDTAGTE 324
K+V+LG VGKS+L ++FV+ F + + TI ++ Q + +D + LEI DTAG E
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 325 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEA 504
++ ++ +Y +N ++VY IT ++ + +++ R + + + L GNK DL
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQR-QAPEGIVIALAGNKLDLAQ 134
Query: 505 E-RVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKKSPKKDE 657
E R V K + A N F ETSAK +VN++F I KK P +D+
Sbjct: 135 ERRAVEKADAEAYAAEANLLFFETSAKTAENVNELF----TAIAKKLPLEDK 182
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 85.0 bits (201), Expect = 1e-17
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQ 327
K+V+LG GVGK+ L QFV F +Y TI D K V VD + L++ DTAG E+
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 328 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL--RVKDTTDVPMVLVGNKTDLE 501
F ++ + + V+VY++ +F+ +++ R++ L +D P ++VGN+ D +
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 502 A-ERVVGKEQGQNL--ARH-FNCAFMETSAKAKIHVNDVFYDLVRQINKKSPKKDE 657
A +R V + + ++H N E SAK +V D+F + R + +D+
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALENESSRDD 185
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 84.2 bits (199), Expect = 2e-17
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 6/159 (3%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQ 327
K+++LG GVGK+++ Q+V F + Y TI D K+V VD + L++ DTAG E+
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 328 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL---RVKDTTDVPMVLVGNKTDL 498
F ++ + + VLVY + +F L R++ L + P +L+GNK D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 499 EAE-RVVGKEQGQNLAR-HFNCAFMETSAKAKIHVNDVF 609
E + R+V K + + + ETSAK I+V + F
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAF 168
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 81.4 bits (192), Expect = 1e-16
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 15/195 (7%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEIL--DTAGTE 324
K+VV+G GG GK+ L + F G F E+Y PT+ ++Y + ++E+ DTAG E
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 325 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDL-QDLREQILRVKDTTDVPMVLVGNKTDLE 501
++ +R L N +L +SI ++ N++ + ++ T P+VLVG K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRT--PIVLVGLKADLR 133
Query: 502 AER------------VVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKKSP 645
+R V +Q Q++A N ++E SAK VN+VF V KKS
Sbjct: 134 KDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQLAVGLTIKKS- 192
Query: 646 KKDEHKPNKRKCIIL 690
+K+ C+IL
Sbjct: 193 ----FSFSKKSCVIL 203
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 80.2 bits (189), Expect = 3e-16
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 330
K+V++G G GK+ L + F +G F E Y PT+ ++Y VEVDG+ L + DTAG E +
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDY 67
Query: 331 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQD-LREQILRVKDTTDVPMVLVGNKTDLE-- 501
+R L + ++ +++ + + +++Q+ ++L + +P++LV K DL
Sbjct: 68 DRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHF--CSSLPILLVACKADLRND 125
Query: 502 ----------AERVVGKEQGQNLARHFNC-AFMETSAKAKIHVNDVFYDLVRQI---NKK 639
+ V E+GQ +A+ ++E SAK V +VF R +K
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLKHKP 185
Query: 640 SPKKDEHKPNKRKCIIL 690
K K++CI+L
Sbjct: 186 KVKPSSGTKKKKRCILL 202
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 77.0 bits (181), Expect = 3e-15
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 330
KIV+LG G GK++L F +G F + Y+PTI ++Y + VDG L + DTAG E++
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 331 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRV-KDTTDVPMVLVGNKTDL--- 498
+R L + ++ +++ ++ + ++ + + + V + V +VLV K DL
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENV--ITKWLPEVSSNCPGVKLVLVALKCDLRGA 132
Query: 499 -----EAERVVGKEQGQNLARHFNCA-FMETSAKAKIHVNDVFYDLVRQINKKSPK 648
+ +++ E+G A+ N ++E SAK VN+ F + R P+
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQPR 188
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 74.1 bits (174), Expect = 2e-14
Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Frame = +1
Query: 148 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTAGTE 324
+K+V++G GG GK+ + + G F +KY T+ + + + + + DTAG E
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 325 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEA 504
+ +RD Y GQ ++++ +T++ T+ ++ ++RV + ++P+VL GNK D++
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCE--NIPIVLCGNKVDVKE 127
Query: 505 ERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQI 630
+V K + R N + + SAK+ + F L R++
Sbjct: 128 RKV--KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 73.7 bits (173), Expect = 3e-14
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDG-----QQCMLEILDTA 315
KIV+ G G GKS L +FV+ + ++ T+ + ++ G ++ L+I DTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 316 GTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTD 495
G E+F ++ Y + G VLVY +T + +F +L I + +T + +VL G+K+D
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPST-ICVVLAGSKSD 129
Query: 496 LEAERVVGKEQGQNLA--RHFNCAFMETSAKAKIHVNDVFYDLVRQI 630
L+ +R V E+ +H + A ETS+ +V + F +V I
Sbjct: 130 LQNQRQVSTEEAAEFCSEKHISSAH-ETSSYTGSNVEECFLSVVSTI 175
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 71.3 bits (167), Expect = 1e-13
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Frame = +1
Query: 139 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 318
M K VV+G G VGK+ L + + F Y PT+ D+Y V + + L + DTAG
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAG 60
Query: 319 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDL 498
E + +R L F++ +S+T+ ++F ++++ + VP ++VG + DL
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVH-HHCPGVPCLIVGTQIDL 119
Query: 499 EAERVVGK------------EQGQNLARHFNCA-FMETSAKAKIHVNDVFYD-LVRQINK 636
+ V + EQG+ LAR ++E SA + + +VF + +V ++
Sbjct: 120 RDDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDP 179
Query: 637 KSPKKDEHKPNKRKCIIL 690
P K K KC++L
Sbjct: 180 PVPHK-----KKSKCLVL 192
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 67.7 bits (158), Expect = 2e-12
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 330
K+VV+G G GK++L F G F +Y PT+ ++Y VDG+ L + DTAG E++
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEY 69
Query: 331 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEAER 510
+R + ++ ++I + + ++ + + +VP +LVG K DL ++
Sbjct: 70 ERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTL-CPNVPFILVGMKADLRSDP 128
Query: 511 V------------VGKEQGQNLARHFNC-AFMETSAKAKIHVNDVFYDLVRQINKKSPKK 651
V V +Q + +A+ +ME S+ V+DVF R + +
Sbjct: 129 VAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRA--ALTVRD 186
Query: 652 DEHKPNKRKCIIL 690
E+ + KC I+
Sbjct: 187 SENDKSSTKCCII 199
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 53.6 bits (123), Expect = 3e-08
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Frame = +1
Query: 151 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSY-RKQVEVDGQQCMLEILDTAGTEQ 327
K+ ++G +GK++L V +VQG F E+ T+ ++ K + + + I D G +
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 328 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTD---- 495
F M + + + ++ ++ +ST N +++ Q R + T VP +L+G K D
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQ-ARGFNKTAVP-ILIGTKYDHFMT 129
Query: 496 --LEAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVF 609
E + + K Q + A+ + + S I+V +F
Sbjct: 130 FPREDQEEITK-QARRYAKAMKASLVFCSTSHSINVQKIF 168
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 145 EYKIVVL-GSGGVGKSALTVQFVQGIFVEK 231
++KI+VL G GGVGKS + Q G+ +E+
Sbjct: 60 KHKILVLSGKGGVGKSTFSSQLAWGLSLEE 89
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 139 MREYKIVVLGSGGVGKSALTVQFVQ 213
M+E ++V+ G GVGKS+L +Q
Sbjct: 1 MKEVRVVICGDQGVGKSSLISALIQ 25
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 215 PCTNCTVRADFPTPPLPNTTILYSR 141
P TN T R +P P+PNT + Y+R
Sbjct: 315 PVTNET-RQSYPNLPIPNTPLYYTR 338
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 119 VTQYRE*CASTK*LC*AAEAWESPP*QCNLYKASLSRN-TTQPSKTATGNK 268
+ Y E + + +C +AW PP +L + + N T PS + G K
Sbjct: 210 LASYGEKASDVRYVCLFCKAWNGPPIDKSLPSSEMDSNLQTNPSSISKGKK 260
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1
Query: 669 IRFVFILLGGLLVDLSH*VIEHIVNMY--FRFCRRLHESAVEVARQILS 529
I F L G +V++ H + + N + F FC LHE VE A QIL+
Sbjct: 26 ILFELCLQAGPVVNI-HIPRDRVRNSHNGFGFCEFLHEQDVEYACQILN 73
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 154 IVVLGSGGVGKSALTVQFVQGIFVEK 231
+V+ G GGVGKS++T Q + K
Sbjct: 9 LVLSGKGGVGKSSVTTQLALSLHDSK 34
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 316 LRYPGSRAYIAVHQLPLVSCSCLRWLGRI 230
+ +P SR H LP++ CS L +G I
Sbjct: 65 MSHPSSRKDTMEHGLPIILCSTLMLVGNI 93
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 215 PCTNCTVRADFPTPPLPNTTILYSRIIPYI 126
P +CT++ + T +P T L++ I PY+
Sbjct: 569 PLGSCTMKLNAVTEMMPITNPLFANIHPYV 598
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = +1
Query: 451 DTTDVPMVLVGNKTDLEAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQI 630
D TD + G K D++ E L + +T + + D+ D ++Q
Sbjct: 419 DMTDKSETVSGFKHDVDVYDTAENEGNNTLLQIKESVHEKTPTQDE--PMDISQDTIKQE 476
Query: 631 NKKSPKKDEHKPNKRKCI 684
+ PK ++H +KR I
Sbjct: 477 DYYEPKLEQHSSSKRNSI 494
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,517,534
Number of Sequences: 5004
Number of extensions: 76796
Number of successful extensions: 272
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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