Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_O01
         (319 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40; Eutele...    64   8e-10
UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9; Eukar...    62   2e-09
UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4; Pezizom...    61   4e-09
UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90; Eukary...    56   2e-07
UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A, cyt...    54   5e-07
UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29; Fung...    54   5e-07
UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal ...    54   8e-07
UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago ma...    53   1e-06
UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe...    52   3e-06
UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing prote...    47   7e-05
UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4; Archae...    42   0.003
UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2; Fungi/M...    40   0.011
UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10; Eurya...    38   0.033
UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1; Methanobre...    38   0.043
UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18; Archa...    37   0.076
UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila ...    33   1.6  
UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12; Archa...    33   1.6  

>UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40;
           Euteleostomi|Rep: 60S ribosomal protein L37 - Homo
           sapiens (Human)
          Length = 97

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           CG  +YH+QKS C +CGYPA + R Y+WS KA                      +GF+EG
Sbjct: 22  CGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREG 81

Query: 182 -KPTPPKKAVASS 217
             P P + AVA+S
Sbjct: 82  TTPKPKRAAVAAS 94


>UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9;
           Eukaryota|Rep: 60S ribosomal protein L37-1 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 95

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           CG  S+HIQKS+C+ C YPAA+ R+Y+WSVKA                        F+EG
Sbjct: 22  CGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRNVPRRFKTCFREG 81

Query: 182 -KPTPPKKAVASS 217
            + TP  KA ASS
Sbjct: 82  TQATPRNKAAASS 94


>UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4;
           Pezizomycotina|Rep: 60S ribosomal protein L37 -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 158

 Score = 61.3 bits (142), Expect = 4e-09
 Identities = 27/62 (43%), Positives = 32/62 (51%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           CG  S+HIQKS CA CGYP+AK+R Y+WS KA                      NGF+ G
Sbjct: 88  CGRRSFHIQKSTCANCGYPSAKVRKYNWSEKAKRRKTTGTGRMSHLKDVHRRFKNGFQVG 147

Query: 182 KP 187
            P
Sbjct: 148 TP 149


>UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90;
           Eukaryota|Rep: 60S ribosomal protein L37 -
           Caenorhabditis elegans
          Length = 91

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 24/64 (37%), Positives = 30/64 (46%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           CG SS+HIQK +CA CGY  AK R+Y+W  K+                      NGF+  
Sbjct: 22  CGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGT 81

Query: 182 KPTP 193
            P P
Sbjct: 82  TPKP 85


>UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A,
           cytosolic; n=1; Neurospora crassa|Rep: Probable
           ribosomal protein L37.e.A, cytosolic - Neurospora crassa
          Length = 124

 Score = 54.4 bits (125), Expect = 5e-07
 Identities = 27/67 (40%), Positives = 30/67 (44%)
 Frame = +2

Query: 14  SYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEGKPTP 193
           S H QK  CA CGYPAAK R Y+WS KA                      NGF+ G P  
Sbjct: 58  SLHNQKKVCASCGYPAAKTRKYNWSEKAKRRKTTGTGRLRYLSTVSRKFKNGFQTGVPKG 117

Query: 194 PKKAVAS 214
            K  VA+
Sbjct: 118 SKGPVAA 124


>UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29;
           Fungi/Metazoa group|Rep: 60S ribosomal protein L37-B -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 88

 Score = 54.4 bits (125), Expect = 5e-07
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           CG  S+H+QK  C+ CGYP+AK RS++W+ KA                      NGF+ G
Sbjct: 22  CGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTG 81


>UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal
           protein L37; n=3; Eutheria|Rep: PREDICTED: similar to
           ribosomal protein L37 - Canis familiaris
          Length = 124

 Score = 53.6 bits (123), Expect = 8e-07
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           CG  +YH+QKS C +C YPA   R Y+W  KA                      +GF+ G
Sbjct: 49  CGSKAYHLQKSTCGKCRYPAKWKRKYNWGAKAKRRNTTGTGRMRHLKIVYHRCRHGFRGG 108

Query: 182 -KPTPPKKAVASS 217
             P P + AVA+S
Sbjct: 109 TTPKPKRAAVAAS 121


>UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago
           maydis|Rep: Ribosomal protein L37 - Ustilago maydis
           (Smut fungus)
          Length = 125

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 23/60 (38%), Positives = 27/60 (45%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           C   ++H QK  CA CGYPAAK+RSY W  KA                      NGF+ G
Sbjct: 58  CNARAFHRQKKVCASCGYPAAKIRSYEWGQKAKRRKTTGTGRMRYLKNVSRRAKNGFQTG 117


>UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe
           grisea 70-15|Rep: Ribosomal protein L37 - Magnaporthe
           grisea 70-15
          Length = 188

 Score = 51.6 bits (118), Expect = 3e-06
 Identities = 23/58 (39%), Positives = 26/58 (44%)
 Frame = +2

Query: 14  SYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEGKP 187
           S H+QK  CA CGYPAAK R Y+WS KA                      N F+ G P
Sbjct: 120 SLHVQKHTCASCGYPAAKTRKYNWSEKAKRRKTTGTGRMRYLSTVTRKFKNDFQTGTP 177


>UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing protein;
           n=5; Eukaryota|Rep: Ribosomal protein L37e containing
           protein - Tetrahymena thermophila SB210
          Length = 214

 Score = 47.2 bits (107), Expect = 7e-05
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYH-WSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKE 178
           CG ++YH QK +CA CGYP AK+R Y  W  K                       NGF+ 
Sbjct: 68  CGKATYHKQKLRCAACGYPDAKMRRYDGWGQKVRDRKGQGTGRMRYMKTIARRAKNGFRS 127

Query: 179 G 181
           G
Sbjct: 128 G 128


>UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4;
           Archaea|Rep: 50S ribosomal protein L37e - Thermoplasma
           volcanium
          Length = 54

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 12/29 (41%), Positives = 22/29 (75%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWS 88
           CG  +Y+++  +C+ CG+PA ++RSY W+
Sbjct: 23  CGHHTYNVRTKRCSHCGFPAPRIRSYKWA 51


>UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2;
           Fungi/Metazoa group|Rep: 60S RIBOSOMAL PROTEIN L37 -
           Encephalitozoon cuniculi
          Length = 90

 Score = 39.9 bits (89), Expect = 0.011
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKA 97
           CG  SYH QK+ C+ CGYP  K+R+   S+KA
Sbjct: 22  CGRQSYHKQKNSCSSCGYPNPKMRN-PGSIKA 52


>UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10;
           Euryarchaeota|Rep: 50S ribosomal protein L37e -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 58

 Score = 38.3 bits (85), Expect = 0.033
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPA-AKLRSYHWSVK 94
           CG  SYH +K  C+ CG+ A AK R Y W  K
Sbjct: 23  CGEKSYHTKKKVCSSCGFGASAKRRDYEWQGK 54


>UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1;
           Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
           protein L37e - Methanobrevibacter smithii (strain PS /
           ATCC 35061 / DSM 861)
          Length = 55

 Score = 37.9 bits (84), Expect = 0.043
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAK-LRSYHWSVK 94
           CG ++YHI K  CA CG+  +K +R Y W  K
Sbjct: 15  CGRNTYHIHKKVCASCGFGKSKRIRRYSWQNK 46


>UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18;
           Archaea|Rep: 50S ribosomal protein L37e - Pyrococcus
           furiosus
          Length = 62

 Score = 37.1 bits (82), Expect = 0.076
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGY-PAAKLRSYHWSVK 94
           CG  SY+++K  CA CG+  + +LR Y WS K
Sbjct: 23  CGRVSYNVKKGYCAACGFGRSRRLRKYRWSKK 54


>UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila
          melanogaster|Rep: Ribosomal protein L37 - Drosophila
          melanogaster (Fruit fly)
          Length = 103

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 2  CGISSYHIQKSKCAQ 46
          CG SSYH+QKSKC+Q
Sbjct: 22 CGNSSYHLQKSKCSQ 36


>UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12;
           Archaea|Rep: 50S ribosomal protein L37e - Methanococcus
           maripaludis
          Length = 64

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGY-PAAKLRSYHWSVK 94
           CG  ++H++K  CA CG+  ++K++ + W  K
Sbjct: 23  CGRRAFHVRKKVCAACGFGRSSKIKRFAWQWK 54


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,104,820
Number of Sequences: 1657284
Number of extensions: 2977324
Number of successful extensions: 6554
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6553
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)