Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_O01
         (319 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0089 + 633642-633644,633728-633863,635356-635457,635565-63...    63   4e-11
08_01_0195 + 1612938-1613003,1613026-1613161,1614624-1614725,161...    62   7e-11
02_05_1204 + 34936696-34936698,34936809-34936944,34937794-349378...    62   9e-11

>02_01_0089 +
           633642-633644,633728-633863,635356-635457,635565-635608
          Length = 94

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 27/72 (37%), Positives = 38/72 (52%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           CG  S+H+QKS C+ CGYPAA++R Y+WSVKA                      + F+EG
Sbjct: 22  CGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSNFREG 81

Query: 182 KPTPPKKAVASS 217
               P+K  A++
Sbjct: 82  TEATPRKRAAAA 93


>08_01_0195 +
           1612938-1613003,1613026-1613161,1614624-1614725,
           1614833-1614876
          Length = 115

 Score = 62.5 bits (145), Expect = 7e-11
 Identities = 27/70 (38%), Positives = 36/70 (51%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           CG  S+H+QKS C+ CGYPAA++R Y+WSVKA                      + F+EG
Sbjct: 43  CGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSNFREG 102

Query: 182 KPTPPKKAVA 211
               P+K  A
Sbjct: 103 TEATPRKRAA 112


>02_05_1204 +
           34936696-34936698,34936809-34936944,34937794-34937895,
           34938153-34938199
          Length = 95

 Score = 62.1 bits (144), Expect = 9e-11
 Identities = 27/72 (37%), Positives = 38/72 (52%)
 Frame = +2

Query: 2   CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
           CG  S+H+QKS C+ CGYPAA++R Y+WSVKA                      + F+EG
Sbjct: 22  CGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYLRHVPKRFKSNFREG 81

Query: 182 KPTPPKKAVASS 217
               P+K  A++
Sbjct: 82  TEAAPRKKGAAA 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,166,361
Number of Sequences: 37544
Number of extensions: 84481
Number of successful extensions: 170
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)