BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_O01
(319 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2108|AAF48428.1| 93|Drosophila melanogaster CG9091-PA... 85 2e-17
AE013599-3544|AAF46957.1| 89|Drosophila melanogaster CG9873-PA... 64 4e-11
BT023213-1|AAY55629.1| 89|Drosophila melanogaster IP02962p pro... 60 6e-10
BT023224-1|AAY55640.1| 103|Drosophila melanogaster IP02862p pro... 33 0.10
AY061630-1|AAL29178.1| 680|Drosophila melanogaster SD10769p pro... 27 6.9
AE013599-2895|AAF57554.1| 680|Drosophila melanogaster CG7744-PA... 27 6.9
>AE014298-2108|AAF48428.1| 93|Drosophila melanogaster CG9091-PA
protein.
Length = 93
Score = 84.6 bits (200), Expect = 2e-17
Identities = 41/71 (57%), Positives = 43/71 (60%)
Frame = +2
Query: 2 CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
CG SSYHIQKS CAQCGYPAAKLRSY+WSVKA NGF+EG
Sbjct: 22 CGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTGTGRMQHLKVVRRRFRNGFREG 81
Query: 182 KPTPPKKAVAS 214
PKKAVAS
Sbjct: 82 TQAKPKKAVAS 92
>AE013599-3544|AAF46957.1| 89|Drosophila melanogaster CG9873-PA
protein.
Length = 89
Score = 64.1 bits (149), Expect = 4e-11
Identities = 29/60 (48%), Positives = 34/60 (56%)
Frame = +2
Query: 2 CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
CG SSYH+QKSKC+QCGYPAAK RS++WS KA NG +EG
Sbjct: 22 CGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREG 81
>BT023213-1|AAY55629.1| 89|Drosophila melanogaster IP02962p
protein.
Length = 89
Score = 60.1 bits (139), Expect = 6e-10
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +2
Query: 2 CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXXXXXXXXXXXXXNGFKEG 181
CG SSYH+QKSKC+Q GYPAAK RS++WS KA NG +EG
Sbjct: 22 CGNSSYHLQKSKCSQSGYPAAKTRSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREG 81
>BT023224-1|AAY55640.1| 103|Drosophila melanogaster IP02862p
protein.
Length = 103
Score = 32.7 bits (71), Expect = 0.10
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2
Query: 2 CGISSYHIQKSKCAQ 46
CG SSYH+QKSKC+Q
Sbjct: 22 CGNSSYHLQKSKCSQ 36
>AY061630-1|AAL29178.1| 680|Drosophila melanogaster SD10769p
protein.
Length = 680
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 11 SSYHIQKSKCAQCGYPAAKLRSYHWS 88
S + Q AQCG AA +R Y WS
Sbjct: 593 SGFESQPRPEAQCGTGAATVRDYGWS 618
>AE013599-2895|AAF57554.1| 680|Drosophila melanogaster CG7744-PA
protein.
Length = 680
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 11 SSYHIQKSKCAQCGYPAAKLRSYHWS 88
S + Q AQCG AA +R Y WS
Sbjct: 593 SGFESQPRPEAQCGTGAATVRDYGWS 618
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,976,541
Number of Sequences: 53049
Number of extensions: 135797
Number of successful extensions: 278
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -