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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_N24
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.99 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.99 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   4.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   4.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   7.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   7.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 524 YNYTNKYNIMTYMEYPIILFQVYVMFY 604
           Y + N   +  Y ++ I  FQ+YV+F+
Sbjct: 134 YIFANIMGLEFYKQFAIEYFQMYVLFF 160


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 524 YNYTNKYNIMTYMEYPIILFQVYVMFY 604
           Y + N   +  Y ++ I  FQ+YV+F+
Sbjct: 134 YIFANIMGLEFYKQFAIEYFQMYVLFF 160


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 373 DLY*IWYVNHFAFKSNSKCSNFLRTRTSTVLSIV 272
           DLY    V++F   S+S   N++RT TS V  I+
Sbjct: 45  DLYNTSSVSNFNESSSSVFPNYIRT-TSMVFCII 77


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 373 DLY*IWYVNHFAFKSNSKCSNFLRTRTSTVLSIV 272
           DLY    V++F   S+S   N++RT TS V  I+
Sbjct: 45  DLYNTSSVSNFNESSSSVFPNYIRT-TSMVFCII 77


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -1

Query: 580 KYDRVLHIGHDVILVCIIVERHYGKANNLHKHGLNIYSLGRS 455
           K D  L+   +++LV  + + +     +LH +  N+  +GRS
Sbjct: 571 KVDIPLNAIVEIVLVDEVQQPNLSHPFHLHGYAFNVIGIGRS 612


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 657 SLHTLLLCSVSSWIYCRNKFSPIW 728
           + HTL +   + W   R K SP++
Sbjct: 111 AFHTLFISKDAVWRNLRTKLSPVF 134


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 575 ILFQVYVMFYFVLKYKNMLNLPII 646
           +LFQ Y ++Y      + + +P+I
Sbjct: 266 VLFQAYYLYYVATGKASFVTVPMI 289


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 575 ILFQVYVMFYFVLKYKNMLNLPII 646
           +LFQ Y ++Y      + + +P+I
Sbjct: 266 VLFQAYYLYYVATGKASFVTVPMI 289


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 550 DVILVCIIVERHYGKANNLHKHGLNIYSLGRS 455
           +V+LV  +   +     +LH +  N+  +GRS
Sbjct: 581 EVVLVDEVQSPNLSHPFHLHGYAFNVVGIGRS 612


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 659 ASYFASVFGFVMDLLPKQVLSYLVP 733
           ASYFA +FG     +  Q  SY  P
Sbjct: 387 ASYFAYIFGKFACKIMIQGFSYAFP 411


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 659 ASYFASVFGFVMDLLPKQVLSYLVP 733
           ASYFA +FG     +  Q  SY  P
Sbjct: 387 ASYFAYIFGKFACKIMIQGFSYAFP 411


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 449  EKRSAEGIYIQAMLMEIIGFTIMSLY 526
            E ++  G+YI  + +E IGF  +  +
Sbjct: 1266 EDKNEIGVYITYLQLEPIGFVFLIFF 1291


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 449  EKRSAEGIYIQAMLMEIIGFTIMSLY 526
            E ++  G+YI  + +E IGF  +  +
Sbjct: 1266 EDKNEIGVYITYLQLEPIGFVFLIFF 1291


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 659 ASYFASVFGFVMDLLPKQVLSYLVP 733
           ASYFA +FG     +  Q  SY  P
Sbjct: 387 ASYFAYIFGKFACKIMIQGFSYAFP 411


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 659 ASYFASVFGFVMDLLPKQVLSYLVP 733
           ASYFA +FG     +  Q  SY  P
Sbjct: 387 ASYFAYIFGKFACKIMIQGFSYAFP 411


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,936
Number of Sequences: 336
Number of extensions: 4205
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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