Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_N24
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41996-4|AAA83473.1| 238|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm rece... 35 0.083
U00049-2|AAC47052.2| 327|Caenorhabditis elegans Serpentine rece... 32 0.44
Z68114-8|CAA92162.1| 317|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z72502-9|CAE17688.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 29 3.1
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 29 3.1
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73969-8|CAA98239.1| 351|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z48045-5|CAD56564.1| 374|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z48045-4|CAA88102.2| 404|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U41996-4|AAA83473.1| 238|Caenorhabditis elegans Hypothetical
protein F38E1.9 protein.
Length = 238
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/135 (22%), Positives = 62/135 (45%)
Frame = +2
Query: 371 IFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNI 550
+ + L L S+ L VPQI+ I+ RSA+GI + L+ ++G + Y+Y + +
Sbjct: 32 VLSRGLGFAITLGSILLFVPQILKIQAARSAQGISAASQLLALVGAIGTASYSYRSGFVF 91
Query: 551 MTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLLPKQVLSYLV 730
+ + + Q+ ++ + + L + + + S A +G V +P Q L+ +
Sbjct: 92 SGWGDSFFVAVQLVIIILQIFLFSGQTMLSVGFLGIVS--AVAYGVVSKSIPMQTLTAVQ 149
Query: 731 PFCTPLSGFAKVTYI 775
P+ +K+ I
Sbjct: 150 TAGIPIVVVSKLLQI 164
>AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm
receptor protein 131 protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.083
Identities = 19/82 (23%), Positives = 37/82 (45%)
Frame = +2
Query: 506 FTIMSLYNYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFG 685
+ +++ Y YN + + P+++ + + Y V+ + + N+PI + F S FG
Sbjct: 42 YLMLAFSLYAILYNYVDIITLPLVVIEKQM--YVVVNHGPIRNVPIFGFLFTCLFGSSFG 99
Query: 686 FVMDLLPKQVLSYLVPFCTPLS 751
+ LL Q + C P S
Sbjct: 100 LCISLLSTQFFYRYLAVCRPKS 121
>U00049-2|AAC47052.2| 327|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 2 protein.
Length = 327
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 539 KYNIMTYMEYPIILFQVYVMFYFVLKYKNM-LNLPIIPVMVASYFASVFGFVMDLLPKQV 715
KY + P + +++ + K++N+ L + + S A V D+ +V
Sbjct: 33 KYLVQFVYLLPAAMLHARILYILLWKHRNLYLKQSFYILFIMSCIACFTLVVQDIFFARV 92
Query: 716 LSYLVPFCTPLSGFAK 763
Y+ FC P+S F +
Sbjct: 93 FQYMTQFCEPMSEFVE 108
>Z68114-8|CAA92162.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.11 protein.
Length = 317
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/117 (18%), Positives = 55/117 (47%)
Frame = +2
Query: 332 FESKMIDVPYLIEIFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFT 511
FE+ + Y + + +S + +L +++LK ++ K+S + I I +L+ +
Sbjct: 82 FEAIISYCLYFVSQSTSVVSNILVLLTIYLKYEAAKNVTNKQSNKCIVIILLLVPVFVLV 141
Query: 512 IMSLYNYTNKYNIMTYMEYPIILFQVYVMFYFVLKYKNMLNLPIIPVMVASYFASVF 682
+Y+ ++++ + Y + V + V+ Y + +P ++++ F SVF
Sbjct: 142 GAEIYSVVT-HSLLPEVRYLFEVINSNVTDHSVIGYITLQTVPSY-LIISIVFGSVF 196
>Z72502-9|CAE17688.1| 300|Caenorhabditis elegans Hypothetical
protein C08B6.12 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 353 VPYLIEIFANALST-MTILSSLFLKVPQIMS-IREKRSAEGIYIQAMLMEIIGFTIMSLY 526
+ Y I IF +S M IL +F+K+ ++ S +R K + I ++++ ++ T LY
Sbjct: 173 ISYFIHIFLPWVSVFMNILVFIFIKLRKMKSQVRRKSGERTLVINSLVVSLL-LTANYLY 231
Query: 527 NY 532
NY
Sbjct: 232 NY 233
>Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical
protein C16C10.3 protein.
Length = 1032
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 584 QVYVMFYFVLKYKNMLNLPIIPVMVASYFASVFGFVMDLL 703
+V V YF+L+Y L P +P++V+ F F M+LL
Sbjct: 438 EVTVAEYFLLQYNIKLKYPRLPLVVSKRFKHESFFPMELL 477
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = -2
Query: 513 MVKPIISISMA*IYIPSADLFSRMDIICGTLRNKDDSIVMVLSALAKISIKYGTSIILLS 334
M P+I+I + +P++D ++ + CG+ D+ +L A+ K+ + G SI+ ++
Sbjct: 223 MTGPVITIKLTEGDLPNSDQLTQYQLTCGS----DEERFAILVAMFKLKLIVGRSILFVN 278
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = -2
Query: 513 MVKPIISISMA*IYIPSADLFSRMDIICGTLRNKDDSIVMVLSALAKISIKYGTSIILLS 334
M P+I+I + +P++D ++ + CG+ D+ +L A+ K+ + G SI+ ++
Sbjct: 290 MTGPVITIKLTEGDLPNSDQLTQYQLTCGS----DEERFAILVAMFKLKLIVGRSILFVN 345
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical protein
E03G2.2 protein.
Length = 1503
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/94 (24%), Positives = 40/94 (42%)
Frame = +2
Query: 338 SKMIDVPYLIEIFANALSTMTILSSLFLKVPQIMSIREKRSAEGIYIQAMLMEIIGFTIM 517
SK + P L + N LS + + I I + + + + L F +M
Sbjct: 1016 SKNLHKPLLHNVLRNPLS--------YFDITPIGRIINRLAKDMEVVDLRLSSSFRFLVM 1067
Query: 518 SLYNYTNKYNIMTYMEYPIILFQVYVMFYFVLKY 619
+L N T T + I+ V+++++FVLKY
Sbjct: 1068 ALINMTVLIVSYTTPLFIAIIIPVFIIYFFVLKY 1101
>Z73969-8|CAA98239.1| 351|Caenorhabditis elegans Hypothetical
protein C12D8.12 protein.
Length = 351
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 451 LTYGHNLRYFEK*RRQYSHGAECVSKDLY*IWYVNH-FAFKSNSKCSNFLRTR 296
L YG YF +Y+ +S LY W +N FAF+ N + + FLR R
Sbjct: 113 LKYGSKWIYFHG---KYTFAWFLISPILYINWTLNCIFAFQPNQRSTEFLRPR 162
>Z48045-5|CAD56564.1| 374|Caenorhabditis elegans Hypothetical
protein C41C4.7b protein.
Length = 374
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +2
Query: 428 PQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNIMTYMEYPII 577
PQ+ +++S G+ + + ++GF +++N YN EY I+
Sbjct: 146 PQMYLNFKRKSVVGLNFDFLSLNLVGFCAYAIFNLLMYYNSHVKNEYNIV 195
>Z48045-4|CAA88102.2| 404|Caenorhabditis elegans Hypothetical
protein C41C4.7a protein.
Length = 404
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +2
Query: 428 PQIMSIREKRSAEGIYIQAMLMEIIGFTIMSLYNYTNKYNIMTYMEYPII 577
PQ+ +++S G+ + + ++GF +++N YN EY I+
Sbjct: 146 PQMYLNFKRKSVVGLNFDFLSLNLVGFCAYAIFNLLMYYNSHVKNEYNIV 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,229,322
Number of Sequences: 27780
Number of extensions: 381181
Number of successful extensions: 870
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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