Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_N23
(744 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 113 2e-26
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 112 4e-26
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 92 7e-20
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 89 6e-19
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 76 5e-15
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 73 3e-14
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 63 4e-11
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 62 1e-10
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 60 3e-10
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 39 7e-04
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 37 0.003
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 37 0.003
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 36 0.005
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 36 0.005
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 33 0.057
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 29 0.70
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 29 0.92
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 28 1.2
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 2.1
SPAPB17E12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.7
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 27 3.7
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 25 8.6
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 113 bits (273), Expect = 2e-26
Identities = 62/112 (55%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
Frame = +1
Query: 415 VTACALLRDFEQLPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDT 594
+ AC LLRDFE L GD T VGE+G SLSGGQ+AR+ LARA Y ++DIYLLDD LSAVD
Sbjct: 679 IRACCLLRDFEILADGDQTEVGEKGISLSGGQKARISLARAVYSRSDIYLLDDILSAVDQ 738
Query: 595 HVGKHLVSECV--NGLLQNHTRILVTHXLHHLKTADKVIILRNGEIEMXGKF 744
HV + LV + GLL++ IL T+ L LK A + +LRNG+I G F
Sbjct: 739 HVNRDLVRNLLGSKGLLRSRCVILSTNSLTVLKEASMIYMLRNGKIIESGSF 790
Score = 52.0 bits (119), Expect = 9e-08
Identities = 27/110 (24%), Positives = 58/110 (52%)
Frame = +1
Query: 397 EDVFNVVTACALLRDFEQLPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLLDDP 576
E++++ + A +L + + L G + V E G +LS GQR + L RA + LLD+
Sbjct: 1328 EEIWHALEAASLKQFIQTLDGGLYSRVTEGGANLSSGQRQLMCLTRALLTPTRVLLLDEA 1387
Query: 577 LSAVDTHVGKHLVSECVNGLLQNHTRILVTHXLHHLKTADKVIILRNGEI 726
+AVD +V + + T + + H ++ + ++++++L +G++
Sbjct: 1388 TAAVDVETDA-IVQRTIRERFNDRTILTIAHRINTVMDSNRILVLDHGKV 1436
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 112 bits (270), Expect = 4e-26
Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +1
Query: 415 VTACALLRDFEQLPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDT 594
+ AC L RDFE GD T VG++G SLSGGQ++R+ LARA Y QADIYLLDD LS+VD
Sbjct: 677 IHACCLKRDFEIFTEGDQTEVGQKGASLSGGQKSRISLARAIYSQADIYLLDDVLSSVDQ 736
Query: 595 HVGKHLVSECV--NGLLQNHTRILVTHXLHHLKTADKVIILRNGEIEMXGKF 744
HV + L+ G L+ H +L T+ L+ LK AD + IL NG+I G +
Sbjct: 737 HVSRDLIKNLFGPEGFLRTHCVVLTTNSLNVLKEADSIYILSNGKIVEKGNY 788
Score = 49.2 bits (112), Expect = 6e-07
Identities = 27/108 (25%), Positives = 54/108 (50%)
Frame = +1
Query: 403 VFNVVTACALLRDFEQLPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLS 582
++ V+ +L QL G + V E G + S GQR + LAR I LLD+ +
Sbjct: 1332 IWEVLEIASLKNCISQLEDGLYSRVAEGGANFSSGQRQLICLARVLLTSTRILLLDEATA 1391
Query: 583 AVDTHVGKHLVSECVNGLLQNHTRILVTHXLHHLKTADKVIILRNGEI 726
+V +V + + ++ T + V H ++ + +D++++L +G++
Sbjct: 1392 SVHAETDA-IVQQTIRKRFKDRTILTVAHRINTVMDSDRILVLDHGKV 1438
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 92.3 bits (219), Expect = 7e-20
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Frame = +1
Query: 388 YP-VEDVFN-VVTACALLRDFEQLPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIY 561
YP +E+ + V+ AC LL D + A D T +GE+G +LSGGQ+ R+ LARA Y I
Sbjct: 702 YPYIEERYKKVIQACGLLTDLQSFVASDLTEIGEKGVTLSGGQKQRIALARAVYSPTSIV 761
Query: 562 LLDDPLSAVDTHVGKHLVSECV-NGLLQNHTRILVTHXLH-HLKTADKVIILRNG 720
L+DD SA+D H + C + L++N T ILVTH +H + +A ++ ++NG
Sbjct: 762 LMDDVFSALDIHTSNWIYKHCFQSSLMENRTVILVTHNVHLFMDSAAFIVTVKNG 816
Score = 43.2 bits (97), Expect = 4e-05
Identities = 25/90 (27%), Positives = 47/90 (52%)
Frame = +1
Query: 469 TLVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVNGLLQNH 648
T V G++ S GQ+ + LARA R++ I +LD+ ++VD + + + + + +
Sbjct: 1347 THVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQK-IQKTLREAFGDA 1405
Query: 649 TRILVTHXLHHLKTADKVIILRNGEIEMXG 738
T + + H L + DKV++L G + G
Sbjct: 1406 TMLCIAHRLKTIVDYDKVMVLDKGVLVEYG 1435
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 89.0 bits (211), Expect = 6e-19
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Frame = +1
Query: 388 YPVEDVFNVVTACALLRDFEQLPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLL 567
Y E F ++ AC L D + GD T + G+SLSGGQ+ RV LARA Y A++Y+
Sbjct: 671 YDEERYFQIIKACCLDSDLNSMNDGDLTYIHSNGSSLSGGQKQRVSLARALYSNAEVYIF 730
Query: 568 DDPLSAVDTHVGKHLVSEC-VNGLLQNHTRILVTHXLH-HLKTADKVIILRNGEIEM 732
DD SA+D + + C ++ LLQ+ T IL TH + L A+ VI+L+N ++
Sbjct: 731 DDIFSALDVSTSRKIYESCFLSTLLQHKTIILFTHNVSLCLPIAENVIVLKNSTAQL 787
Score = 46.0 bits (104), Expect = 6e-06
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1
Query: 469 TLVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVNGLLQNH 648
T V G + S GQR + LARA R++ I +LD+ ++VD + + + + ++
Sbjct: 1316 TPVDSGGVNFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRR-IQQMLRAAFKHA 1374
Query: 649 TRILVTHXLHHLKTADKVIILRNGE 723
T + + H + + DKV++L +G+
Sbjct: 1375 TVLCIAHRIKTIVDYDKVLVLDSGK 1399
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 76.2 bits (179), Expect = 5e-15
Identities = 39/96 (40%), Positives = 56/96 (58%)
Frame = +1
Query: 451 LPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVN 630
LP G TL G++G+SLSGGQ+ R+ +ARA R I LLD+ SA+D+H K +V E +N
Sbjct: 1244 LPNGYNTLCGQKGSSLSGGQKQRIAIARALIRNPKILLLDEATSALDSHSEK-VVQEALN 1302
Query: 631 GLLQNHTRILVTHXLHHLKTADKVIILRNGEIEMXG 738
Q T + + H L ++ AD + + G I G
Sbjct: 1303 AASQGRTTVAIAHRLSSIQDADCIFVFDGGVIAEAG 1338
Score = 64.5 bits (150), Expect = 2e-11
Identities = 33/96 (34%), Positives = 56/96 (58%)
Frame = +1
Query: 451 LPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVN 630
LP T VG+RG +SGGQ+ R+ +ARA I LLD+ SA+D+ + LV + ++
Sbjct: 553 LPEQFSTNVGQRGFLMSGGQKQRIAIARAVISDPKILLLDEATSALDSK-SEVLVQKALD 611
Query: 631 GLLQNHTRILVTHXLHHLKTADKVIILRNGEIEMXG 738
++ T I++ H L ++ AD ++++ G+I G
Sbjct: 612 NASRSRTTIVIAHRLSTIRNADNIVVVNAGKIVEQG 647
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 73.3 bits (172), Expect = 3e-14
Identities = 39/114 (34%), Positives = 60/114 (52%)
Frame = +1
Query: 397 EDVFNVVTACALLRDFEQLPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLLDDP 576
E+++ A + Q P G + VGERG LSGG++ RV +ARA + I LLD+
Sbjct: 688 EEIYAAAKAAQIHDRILQFPDGYNSRVGERGLKLSGGEKQRVAVARAILKDPSIILLDEA 747
Query: 577 LSAVDTHVGKHLVSECVNGLLQNHTRILVTHXLHHLKTADKVIILRNGEIEMXG 738
SA+DT+ + + +N L T I++ H L + AD ++ + NG I G
Sbjct: 748 TSALDTNTERQ-IQAALNRLASGRTAIVIAHRLSTITNADLILCISNGRIVETG 800
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 63.3 bits (147), Expect = 4e-11
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Frame = +1
Query: 469 TLVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVNGLLQNH 648
T VG RG LSGGQ+ R+ +ARA R +LD+ SA+D + +V + + L+ N
Sbjct: 611 TQVGTRGLQLSGGQKQRIAIARALLRNPAFLILDEATSALDGE-AEVMVDKTIQSLMHNR 669
Query: 649 --TRILVTHXLHHLKTADKVIILRNGEIEMXGKF 744
T I + H L ++ AD++I++ +G++ G F
Sbjct: 670 SMTTITIAHKLATIRRADQIIVVGDGKVLEQGSF 703
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 61.7 bits (143), Expect = 1e-10
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +1
Query: 445 EQLPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSEC 624
E P G T VGERG +SGG++ R+ ++R + +I D+ SA+DT+ + L+
Sbjct: 563 ESFPEGYQTKVGERGLMISGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRN- 621
Query: 625 VNGLLQ--NHTRILVTHXLHHLKTADKVIILRNGEIEMXG 738
+N L++ + T + + H L +K D + +L G + G
Sbjct: 622 INDLIKGSHKTSVFIAHRLRTIKDCDIIFVLEKGRVVEQG 661
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 60.1 bits (139), Expect = 3e-10
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +1
Query: 493 SLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVNGLLQNHTRILVTHX 672
SLSGGQ+ R+ LARA R +I +LD+P SA+D + K+LV + + + T +++TH
Sbjct: 570 SLSGGQQQRIALARALLRDTEILILDEPTSALDP-ITKNLVMDAIRAHRKGKTTLVITHD 628
Query: 673 LHHLKTADKVIILRNGEI 726
+ + + V+++ G +
Sbjct: 629 MSQINNDELVLVIDKGHL 646
Score = 51.2 bits (117), Expect = 2e-07
Identities = 32/117 (27%), Positives = 60/117 (51%)
Frame = +1
Query: 394 VEDVFNVVTACALLRDFEQLPAGDCTLVGERGTSLSGGQRARVGLARACYRQADIYLLDD 573
+ V + + + + LP G T + E + SGGQ R+ ARA R + +LD+
Sbjct: 1202 INSVMDALDKTYMTEVIQNLPNGLDTPLLEFSKNFSGGQIQRLAFARALLRNPRLLILDE 1261
Query: 574 PLSAVDTHVGKHLVSECVNGLLQNHTRILVTHXLHHLKTADKVIILRNGEIEMXGKF 744
SA+D+ L+ + + L + T +++TH +K AD++I++ +G ++ G F
Sbjct: 1262 CTSALDSK-SSLLLEKTIQNL--SCTVLIITHQPSLMKLADRIIVMDSGIVKESGSF 1315
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 496 LSG-GQRARVGLARACYRQADIYLLDDPLSAVDTH 597
+SG G+ V L R Y DIY+ PL+ +DT+
Sbjct: 1136 ISGSGKSTLVELLRKTYPSEDIYIDGYPLTNIDTN 1170
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 39.1 bits (87), Expect = 7e-04
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 472 LVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVNGLLQNHT 651
++ +R LSGG R R+ LAR + + + +LD+P + +D L E + ++ HT
Sbjct: 413 MIAKRTNELSGGWRMRIALARILFIKPTLMMLDEPTNHLDLEAVAWL-EEYLTHEMEGHT 471
Query: 652 RILVTH 669
++ H
Sbjct: 472 LLITCH 477
Score = 33.1 bits (72), Expect = 0.043
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 496 LSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVNGLLQNHTRILVTHXL 675
LS GQR RV A Q I LLD+P +A+D L ++ +N + + +TH
Sbjct: 713 LSDGQRRRVLFAFLGMTQPHILLLDEPTNALDIDTIDAL-ADALNNF--DGGVVFITHDF 769
Query: 676 HHL-KTADKVIILRNGEIE 729
+ + A+++ I++NG ++
Sbjct: 770 RLIDQVAEEIWIVQNGTVK 788
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1
Query: 493 SLSGGQRARVGLARACYRQADIYLLDDPLSAVD 591
SLSGG + ++ LARA ++ADI LLD+P + +D
Sbjct: 562 SLSGGWKMKLELARAMLQKADILLLDEPTNHLD 594
Score = 30.7 bits (66), Expect = 0.23
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 490 TSLSGGQRARVGLARACYRQADIYLLDDPLSAVD 591
+SLSGGQ+ +V +A + + +LD+P + +D
Sbjct: 909 SSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 36.7 bits (81), Expect = 0.003
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +1
Query: 472 LVGERGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVNGLLQN-- 645
++ + +LSGG+ RV + A AD+YL+D+P + +D+ + + S+ + + N
Sbjct: 448 IIDQEVLNLSGGELQRVAICLALGMPADVYLIDEPSAYLDSE-QRIIASKVIRRFIVNSR 506
Query: 646 HTRILVTH-XLHHLKTADKVII 708
T +V H + AD+VI+
Sbjct: 507 KTAFIVEHDFIMATYLADRVIL 528
Score = 33.1 bits (72), Expect = 0.043
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 496 LSGGQRARVGLARACYRQADIYLLDDPLSAVD 591
LSGG+ R +A ++AD+Y+ D+P S +D
Sbjct: 220 LSGGELQRFAIAAVATQKADVYMFDEPSSYLD 251
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 493 SLSGGQRARVGLARACYRQADIYLLDDPLSAVD 591
+ SGG R R+ LARA + Q D+ LLD+P + +D
Sbjct: 354 TFSGGWRMRLSLARALFCQPDLLLLDEPSNMLD 386
Score = 29.1 bits (62), Expect = 0.70
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 493 SLSGGQRARVGLARACYRQADIYLLDDPLSAVD 591
+LSGGQ++RV A + I +LD+P + +D
Sbjct: 636 TLSGGQKSRVAFACLGLQNPHILILDEPTNHLD 668
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 36.3 bits (80), Expect = 0.005
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +1
Query: 493 SLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVNGLLQNHTRILVTHX 672
SLSGG + ++ L RA ++ DI LLD+P + +D L + VN ++ + I+V+H
Sbjct: 548 SLSGGWKMKLALTRAMFKNPDILLLDEPTNHLDVVNVAWLENFLVN--QKDVSSIIVSHD 605
Query: 673 LHHLKTADKVII 708
L + II
Sbjct: 606 SGFLDHVVQAII 617
Score = 28.7 bits (61), Expect = 0.92
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 463 DCTLVGE-RGTSLSGGQRARVGLARACYRQADIYLLDDPLSAVD 591
D LV R LSGGQ+ ++ LA + + + +LD+P + +D
Sbjct: 892 DAELVSHSRIKGLSGGQKVKLVLAACTWLRPHVIVLDEPTNYLD 935
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 32.7 bits (71), Expect = 0.057
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 496 LSGGQRARVGLARACYRQADIYLLDDPLSAVD 591
+SGG R RV L+RA + + + LLD+P + +D
Sbjct: 221 MSGGWRMRVALSRALFIKPSLLLLDEPTNHLD 252
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 29.1 bits (62), Expect = 0.70
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 490 TSLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVGKHLVSECVNGLLQ-NHTRILVT 666
+S+S G + + RA +Q + +LD+P VDT H+ +N L + ++++
Sbjct: 404 SSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKY-VHMAHNYLNEKLSPSQAMVIIS 462
Query: 667 H 669
H
Sbjct: 463 H 463
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 28.7 bits (61), Expect = 0.92
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = -2
Query: 644 FCSNPFTHSETRC---LPTCVSTADNGSSRRYMSACL*QARASPTRARCPPLRLVPRSPT 474
F S P H + L T + +GSS + S A ASPT + P +PT
Sbjct: 146 FASIPELHEDNEYHSNLATSSNPFSDGSSSKSASLTASSAAASPTVSFSPASTSENLTPT 205
Query: 473 SVQSPAGNCSKSRSRAHAVTTLKTSSTGY 387
S +S A N S +S A + S Y
Sbjct: 206 SSKSLASNTSLVQSFNSASRSSSISGNQY 234
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 230 FRISRYSGQFHLQLKVPAMNIPNISILNIYIFKGI*LRINWF 105
FRI+ + +++ KVP IP + +L +Y F+ L + WF
Sbjct: 269 FRIAMKDPKTYVKHKVPLTKIPWLLVLKMYGFRLFILCLIWF 310
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Frame = +1
Query: 496 LSGGQRARVGLARAC----YRQADIYLLDDPLSAVD 591
LSGGQR+ V LA Y+ A +Y+LD+ +A+D
Sbjct: 1086 LSGGQRSLVALALIMSLLKYKPAPMYILDEIDAALD 1121
>SPAPB17E12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 203
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 108 PINTQLYSFKNVNVKNTNIRNVHSWYFE 191
P+N LY+ + NVK+ NI +V Y+E
Sbjct: 33 PLNQNLYNIETENVKDLNIEDVD--YYE 58
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 99 LFKPINTQLYSFKNVNVKNTNIRNVHSWYFEL*M--KLAGVSR 221
+F P N++LY+ K VN N + + + E+ + KL+G R
Sbjct: 333 IFSPDNSRLYALKEVNFINADQTTIQGYKNEIALLRKLSGNDR 375
>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 127 YNCVLIGLKSV*SDTSLIISQSYLKKKTTNY 35
YNC + LK I+ S++K +T+NY
Sbjct: 307 YNCTRVHLKRTSPSELDYINASFIKTETSNY 337
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,884,300
Number of Sequences: 5004
Number of extensions: 55568
Number of successful extensions: 166
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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