Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_N23
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    38   2e-04
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    38   2e-04
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    38   2e-04
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    30   0.087
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   1.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   10.0 

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 38.3 bits (85), Expect = 2e-04
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
 Frame = +1

Query: 430 LLRDFEQLPAGDCTLVGERGT--SLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVG 603
           +L++   +   D T++G  G    LSGG+R R+  A        + L D+P S +D+ + 
Sbjct: 221 VLQELSLVKCAD-TIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMA 279

Query: 604 KHLVSECVNGL-LQNHTRILVTH--XLHHLKTADKVIILRNGEIEMXG 738
            H V + + G+ ++  T IL  H          DK++++  G +   G
Sbjct: 280 -HSVLQVLKGMAMKGKTIILTIHQPSSELYCLFDKILLVAEGRVAFLG 326


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 38.3 bits (85), Expect = 2e-04
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
 Frame = +1

Query: 430 LLRDFEQLPAGDCTLVGERGT--SLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVG 603
           +L++   +   D T++G  G    LSGG+R R+  A        + L D+P S +D+ + 
Sbjct: 221 VLQELSLVKCAD-TIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMA 279

Query: 604 KHLVSECVNGL-LQNHTRILVTH--XLHHLKTADKVIILRNGEIEMXG 738
            H V + + G+ ++  T IL  H          DK++++  G +   G
Sbjct: 280 -HSVLQVLKGMAMKGKTIILTIHQPSSELYCLFDKILLVAEGRVAFLG 326


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 38.3 bits (85), Expect = 2e-04
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
 Frame = +1

Query: 430 LLRDFEQLPAGDCTLVGERGT--SLSGGQRARVGLARACYRQADIYLLDDPLSAVDTHVG 603
           +L++   +   D T++G  G    LSGG+R R+  A        + L D+P S +D+ + 
Sbjct: 199 VLQELSLVKCAD-TIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMA 257

Query: 604 KHLVSECVNGL-LQNHTRILVTH--XLHHLKTADKVIILRNGEIEMXG 738
            H V + + G+ ++  T IL  H          DK++++  G +   G
Sbjct: 258 -HSVLQVLKGMAMKGKTIILTIHQPSSELYCLFDKILLVAEGRVAFLG 304


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 29.9 bits (64), Expect = 0.087
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
 Frame = +1

Query: 490  TSLSGGQRARVG----LARACYRQADIYLLDDPLSAVD 591
            T LSGGQR+ V     LA   Y+ A +Y+LD+  +A+D
Sbjct: 1081 TELSGGQRSLVALSLILAMLKYKPAPLYILDEVDAALD 1118


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = -1

Query: 522  HPRPLPPAETGAALADQRAVS---RRQLLEVPQQSARSHH 412
            HP P PP       A+ R++    RRQLL V ++   S H
Sbjct: 1125 HPTPSPPPRAVGRRAEVRSLGERYRRQLLVVEERRQISGH 1164


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 362  NKNPHDEANILSKT 403
            NKN HD A +LS T
Sbjct: 1626 NKNGHDSAGVLSTT 1639


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 513 PLPPAETGAALADQRAVSRRQLLEVPQQSARSHHV 409
           P PP  + +A   Q+   ++QLL  P  S  S+H+
Sbjct: 75  PAPPVLSSSAQQQQQ---QQQLLHHPSSSPHSNHL 106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,378
Number of Sequences: 2352
Number of extensions: 14325
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)