BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_N22
(595 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative odorant-b... 26 0.80
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 25 2.4
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 23 7.4
AY176050-1|AAO19581.1| 522|Anopheles gambiae cytochrome P450 CY... 23 7.4
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 23 9.8
CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply, Sphingosine... 23 9.8
AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding pr... 23 9.8
>AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative
odorant-binding protein OBPjj10 protein.
Length = 207
Score = 26.2 bits (55), Expect = 0.80
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 465 RRHASAARNVLPPRRRNCCRPSLEKTKPR 551
R HASA + PR R+ C + T+ R
Sbjct: 67 RMHASARKRAYCPRTRSACAETFPSTRRR 95
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 24.6 bits (51), Expect = 2.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 14 CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 127
CG K++ +DP E+ +R+M K+ ++ K+P
Sbjct: 1179 CGSKQLDIDP---QEVVGGAGACGVRRMAKEKMLRKRP 1213
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 23.0 bits (47), Expect = 7.4
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 141 PAPVSAKTQRHVERVVTVAL 200
P P+ KT H+E++ + L
Sbjct: 59 PNPLEQKTNAHIEKIFLITL 78
>AY176050-1|AAO19581.1| 522|Anopheles gambiae cytochrome P450
CYP12F2 protein.
Length = 522
Score = 23.0 bits (47), Expect = 7.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 65 NTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 157
N ++ +R IK+GL + +PVA + RA R
Sbjct: 370 NMHNLPYLRACIKEGLRMYQPVAGNMRAAGR 400
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 22.6 bits (46), Expect = 9.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 108 PSLIILRMFCLELVF 64
PSL++ R FC ++V+
Sbjct: 4 PSLLLFRQFCRDIVW 18
>CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply,
Sphingosine-phosphate lyase protein.
Length = 519
Score = 22.6 bits (46), Expect = 9.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 329 SLYMKAKGNVFKNKRVLMEYIHRKKAE 409
SLY +AK VFK R++ R AE
Sbjct: 47 SLYRRAKKKVFKLARLIPAVRRRVDAE 73
>AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding
protein AgamOBP53 protein.
Length = 171
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 369 LFLNTLPFAFM*SEWYRCLSIFL 301
L+ N F FM + +YR L +FL
Sbjct: 3 LYCNEFHFLFMYNIYYRALWLFL 25
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,949
Number of Sequences: 2352
Number of extensions: 12763
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -