Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_N21
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0126 - 5543658-5543670,5543748-5543840,5544344-5544529,554... 32 0.50
10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657 31 0.87
02_05_1197 - 34908382-34908582,34908664-34908837,34909239-349093... 31 0.87
10_08_0033 - 14305552-14305700,14306735-14307153,14307227-14307420 31 1.1
01_02_0106 - 11175200-11175385,11175463-11175496,11175987-111762... 31 1.1
12_01_0919 - 9086879-9087064,9087842-9087923,9088357-9089553,908... 29 2.6
11_02_0133 + 8661030-8661141,8661727-8662031,8662158-8662331,866... 29 3.5
06_02_0050 - 10951725-10951910,10951988-10952021,10952521-109527... 29 3.5
03_05_0594 + 25981587-25981826,25981912-25982160,25982257-259838... 29 3.5
02_03_0365 - 18198669-18198809,18198887-18198979,18199078-181991... 29 3.5
11_01_0446 + 3462820-3464265 29 4.6
08_01_1064 + 10841095-10842326,10842412-10842663,10842942-108430... 29 4.6
04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947... 29 4.6
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 29 4.6
04_04_0359 + 24679907-24680146,24680511-24680939,24681111-246824... 29 4.6
01_06_0720 - 31482732-31482738,31482984-31483027,31483073-31483300 29 4.6
08_02_0474 + 17606370-17606957 28 6.1
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 28 8.1
09_01_0027 - 469856-470773,470780-471261,471296-471408,471453-47... 28 8.1
03_06_0038 + 31227349-31227621,31228120-31228212,31229439-312295... 28 8.1
>10_02_0126 -
5543658-5543670,5543748-5543840,5544344-5544529,
5544613-5545310,5545323-5546237,5546842-5547081
Length = 714
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V+EG + D+ T D + + D W + +G + L +PKPGLG
Sbjct: 317 QPQVVLEGFESYDINFPTADGVSVLGDAVDLVILWHKNDISFGLGTDATQKLVVPKPGLG 376
>10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657
Length = 1032
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 420 HGFSWVTPSQYSETRSWHSHSGEAPNYQQFVDNAMQGLQPKCDP 551
+ FS P+QYS +++ +G N ++F N G+Q P
Sbjct: 173 NAFSLAAPNQYSAAEFYYNSAGGEQNIEEFYYNGASGVQNMVPP 216
>02_05_1197 -
34908382-34908582,34908664-34908837,34909239-34909337,
34909444-34909644,34910229-34910336,34910498-34910882,
34911132-34911584,34911868-34912094,34912211-34912270
Length = 635
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 206 FEKPELCENWLPRRENSLRRHEDSIRWYKNW 298
FE +CENWLPRR S R + + W
Sbjct: 562 FENLHVCENWLPRRVMSAWRAAGIVHALEKW 592
>10_08_0033 - 14305552-14305700,14306735-14307153,14307227-14307420
Length = 253
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 420 HGFSWVTPSQYSETRSWHSHSGEAPNYQQFVDNAMQGLQ 536
+ FS P+QYS ++ G NY++F N + G+Q
Sbjct: 132 NAFSRAAPNQYSAAEFDYNGVGSEQNYEEFYYNGVSGVQ 170
>01_02_0106 -
11175200-11175385,11175463-11175496,11175987-11176247,
11176501-11176831,11176899-11177589,11177611-11178156,
11178441-11178680
Length = 762
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V EG + D+ T D + + D W + +G + +PKPGLG
Sbjct: 368 QPQVVHEGFESYDIDFPTADGVSVLGDAVDLVILWHKNDISFGLGTDATQKPVVPKPGLG 427
Query: 472 -ILIPEKRLITNSS 510
P KR +TN +
Sbjct: 428 KPPRPPKRKVTNKA 441
>12_01_0919 -
9086879-9087064,9087842-9087923,9088357-9089553,
9089598-9089961,9090086-9090188,9090234-9090479
Length = 725
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V EG + D+ +T D + + D W + +G + +PKPGLG
Sbjct: 449 QPQVVHEGFESYDIDFSTADGVSVLGDAVDLVILWHKNDISFGLGTDATQKPVVPKPGLG 508
Query: 472 -ILIPEKRLITNSS 510
P KR +T+ +
Sbjct: 509 KPPRPPKRKVTDKA 522
>11_02_0133 +
8661030-8661141,8661727-8662031,8662158-8662331,
8662469-8662783,8662886-8663456,8663474-8663786,
8663870-8663968,8664202-8664315,8664403-8664463,
8664565-8664657,8664742-8664927
Length = 780
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V EG + D+ T D + + D W + +G + +PKPGLG
Sbjct: 304 QPQVVHEGFESYDIDYPTADGVSVLGDAVDLVILWHKNDISFELGTDATQKPMVPKPGLG 363
Query: 472 -ILIPEKRLITNSS 510
P KR +T+ +
Sbjct: 364 KPPRPPKRKVTDKA 377
>06_02_0050 -
10951725-10951910,10951988-10952021,10952521-10952772,
10953093-10954114
Length = 497
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V EG + D+ T D + + D W + +G + +PKPGLG
Sbjct: 106 QPQVVHEGFESYDIDFPTADGVSVLGDAVDLVILWHKNDISFGLGTDATQKPVVPKPGLG 165
Query: 472 -ILIPEKRLITNSS 510
P KR +T+ +
Sbjct: 166 KPPRPSKRKVTDKA 179
>03_05_0594 +
25981587-25981826,25981912-25982160,25982257-25983818,
25984139-25984390,25984471-25984581,25984669-25984729,
25984829-25984921,25984999-25985184
Length = 917
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V EG + D+ T D + + D W + +G + +PKPGLG
Sbjct: 458 QPQVVHEGFESYDIDFLTADGVSVLGDAVDLVILWHKNDISFGLGTDATQKPVVPKPGLG 517
Query: 472 -ILIPEKRLITNSSSIMQ 522
P KR +T+ + ++
Sbjct: 518 KPPRPPKRKVTDQAEELE 535
>02_03_0365 -
18198669-18198809,18198887-18198979,18199078-18199138,
18199291-18199336,18199417-18199682,18199766-18200744,
18201012-18201564,18201661-18201909,18201995-18202234
Length = 875
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V EG + D+ T D + + D W V +G + +PKPGLG
Sbjct: 369 QPQVVHEGFESYDIDFPTADGVSVLGDAVDLVILWHKNDVSFGLGTDATEKPVVPKPGLG 428
Query: 472 -ILIPEKRLITNSS 510
P KR +T+ +
Sbjct: 429 KPPRPPKRKVTDKA 442
>11_01_0446 + 3462820-3464265
Length = 481
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 6 ASAHQGTVTCVFFSQWLVII 65
+S+HQGTV FF W V+I
Sbjct: 86 SSSHQGTVANAFFKVWAVLI 105
>08_01_1064 +
10841095-10842326,10842412-10842663,10842942-10843020,
10843274-10843459
Length = 582
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V EG + D+ T D + + D W + +G + +PKPGLG
Sbjct: 106 QPQVVHEGFESYDIDFPTADGVSVLGDAVDLVILWHKNDISFGLGTDATQKPVVPKPGLG 165
Query: 472 -ILIPEKRLITNSSSIMQ 522
P KR +T+ + ++
Sbjct: 166 KPPRPPKRKLTDKAEELE 183
>04_04_1465 +
33794225-33794389,33794471-33794597,33794669-33794799,
33795153-33795254,33795337-33795420,33795504-33795731,
33795934-33796038,33796376-33796731,33797146-33797303,
33797399-33797505,33797852-33798061
Length = 590
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 403 AKVVVAMGFPGSPHLSIPKPGLGILIPEKRLITNSSSIMQCKVCN 537
+K V+A G PG+P + + GLG + E SS ++ K N
Sbjct: 302 SKKVLAFGLPGNPVIPADEIGLGRYVAESTGQQASSRLLSMKSAN 346
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 555 CRNTGICVDTNTCLCPANYQGKYC 626
C N C D+ TC C Y GKYC
Sbjct: 379 CDNYYTCPDSTTCCCIYEY-GKYC 401
>04_04_0359 +
24679907-24680146,24680511-24680939,24681111-24682402,
24682486-24682737,24682818-24682928,24683016-24683076,
24683178-24683270,24683348-24683533
Length = 887
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V EG + D+ T D + + D W + +G + +PKPGLG
Sbjct: 340 QPQVVHEGFESYDIDFPTTDGVSVLGDAVDLVILWHKNDISFGLGTDATQKPVVPKPGLG 399
Query: 472 ILI-PEKRLITNSS 510
P KR +T+ +
Sbjct: 400 KPPGPPKRKVTDKA 413
>01_06_0720 - 31482732-31482738,31482984-31483027,31483073-31483300
Length = 92
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 283 VVQKLGTEEPKLVMEGLVTVDLTPATEDPTADMEDPTWVM 402
VV G P LV +G+V + P++E P + P+WV+
Sbjct: 36 VVGLFGLAVPILVYKGIVREFVIPSSEPPLLFLAVPSWVI 75
>08_02_0474 + 17606370-17606957
Length = 195
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/72 (29%), Positives = 27/72 (37%)
Frame = +1
Query: 433 GSPHLSIPKPGLGILIPEKRLITNSSSIMQCKVCNRNATRNAGTQAYALTQTRAFVQLTI 612
G PH S+P G + L+T SI V T +Q A+ V LT
Sbjct: 60 GPPHASMPGRAFGDTVAVDDLVTEGPSIASAAVGRAQGTYMLSSQREAVLVVAITVALTS 119
Query: 613 KGSTVSSRRNLV 648
G + NLV
Sbjct: 120 AGGPYNG-SNLV 130
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 581 VNAYACVPAFRVAFRLQTLHCIIDELLVIRRFSGMRMPRPGF-GILRWGDPGKPMATTTL 405
++ Y CV ++ + + + LLVI F G +PRP L+WG P++ +
Sbjct: 552 LSLYRCVGSYCQTIAVGPIAATMS-LLVILLFGGFLIPRPSMPNWLKWGFWLSPLSYAEI 610
Query: 404 AIT 396
+T
Sbjct: 611 GLT 613
>09_01_0027 -
469856-470773,470780-471261,471296-471408,471453-472003,
472089-472328
Length = 767
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 307 EPKLVMEGLVTVDLTPATEDPTADMEDPT-----WVMAKVVVAMGFPGSPHLSIPKPGLG 471
+P++V EG + D+ T D + + D W + +G + +PKPGLG
Sbjct: 462 KPQVVHEGFDSYDIDFPTADGVSVLGDAVDLVILWHKNDISFGLGTDATEKPVVPKPGLG 521
Query: 472 -ILIPEKRLITNSS 510
P KR +T+ +
Sbjct: 522 KPPRPPKRKVTDKA 535
>03_06_0038 +
31227349-31227621,31228120-31228212,31229439-31229575,
31229953-31231030,31231757-31232374
Length = 732
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 197 TGLFEKPELCENWLPRRENSLRRHEDSIRWYKNWVRRNQ 313
TG+ E+ +W P + S+RR E + WY+ + NQ
Sbjct: 83 TGVKEEASEVLSWPPTSKQSVRRLEVAEHWYRLYKTDNQ 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,438,501
Number of Sequences: 37544
Number of extensions: 380974
Number of successful extensions: 1042
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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