Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_N15
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    25   0.63 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.83 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   4.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.7  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 447 DPSKF-ASLVFRVFDENNDG 503
           DPSK   S +FR+ DENN+G
Sbjct: 364 DPSKRKGSYIFRLPDENNNG 383


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 549 RGNLDEKLHWAFRLYDVDNDGYITRDEMYNI 641
           R +LD+   W  R+YD  + G +  D   NI
Sbjct: 302 RLSLDDMDRWRDRIYDAIHSGVVRGDNGQNI 332


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 140 STSRQHWWIRVQGX*YVINKSR*XDDRGL 226
           ++S + WW R Q   Y++N +R  D+  L
Sbjct: 68  TSSNRPWWERYQPVSYILN-TRSGDEAAL 95


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 140 STSRQHWWIRVQGX*YVINKSR*XDDRGL 226
           ++S + WW R Q   Y++N +R  D+  L
Sbjct: 69  TSSNRPWWERYQPVSYILN-TRSGDETAL 96


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 140 STSRQHWWIRVQGX*YVINKSR*XDDRGL 226
           ++S + WW R Q   Y++N +R  D+  L
Sbjct: 69  TSSNRPWWERYQPVSYILN-TRSGDEAAL 96


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 155 AGVKWSGGKFGNLTDEEKIXERREDTRRG 69
           AG++    KF NLTD   +  R    R G
Sbjct: 280 AGMRIIAEKFANLTDNSVVGVRAPYLRVG 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,022
Number of Sequences: 336
Number of extensions: 3108
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)