Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_N14
         (565 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071747-1|AAL49369.1|   58|Drosophila melanogaster RH56317p pro...    61   9e-10
AE014296-3726|AAN12206.1|   58|Drosophila melanogaster CG33169-P...    61   9e-10
AE014296-3725|AAO41287.1|  234|Drosophila melanogaster CG33169-P...    46   3e-05

>AY071747-1|AAL49369.1|   58|Drosophila melanogaster RH56317p
           protein.
          Length = 58

 Score = 61.3 bits (142), Expect = 9e-10
 Identities = 26/57 (45%), Positives = 43/57 (75%)
 Frame = +3

Query: 117 MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTM 287
           MR+LKG VKET +QK+ERK +  + + +I T+VLP + V+ + + ++VY+KTRP+ +
Sbjct: 1   MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLVLFVYLKTRPAVL 57


>AE014296-3726|AAN12206.1|   58|Drosophila melanogaster CG33169-PA,
           isoform A protein.
          Length = 58

 Score = 61.3 bits (142), Expect = 9e-10
 Identities = 26/57 (45%), Positives = 43/57 (75%)
 Frame = +3

Query: 117 MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTM 287
           MR+LKG VKET +QK+ERK +  + + +I T+VLP + V+ + + ++VY+KTRP+ +
Sbjct: 1   MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLVLFVYLKTRPAVL 57


>AE014296-3725|AAO41287.1|  234|Drosophila melanogaster CG33169-PB,
           isoform B protein.
          Length = 234

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 21/47 (44%), Positives = 34/47 (72%)
 Frame = +3

Query: 117 MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVY 257
           MR+LKG VKET +QK+ERK +  + + +I T+VLP + V+ + + V+
Sbjct: 1   MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLFVH 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,853,556
Number of Sequences: 53049
Number of extensions: 435631
Number of successful extensions: 1520
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)