Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_N12
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077536-5|ABO16441.1| 278|Caenorhabditis elegans Hypothetical ... 29 2.3
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 29 3.1
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 28 4.1
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 28 4.1
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 28 4.1
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 28 4.1
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 4.1
Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical p... 28 5.4
Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z71258-14|CAN86574.1| 201|Caenorhabditis elegans Hypothetical p... 27 9.4
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 27 9.4
AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical ... 27 9.4
>AF077536-5|ABO16441.1| 278|Caenorhabditis elegans Hypothetical
protein C16A11.9 protein.
Length = 278
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/66 (22%), Positives = 32/66 (48%)
Frame = +2
Query: 242 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESESWNELTAKYDPENKFTAKYEK 421
K L+ + R L +C+ + +K + + N + S+N + K +NKF A +
Sbjct: 16 KHLEANKRFQLVAQCSSLVKVEKSQPLVIKKLIFNRRTISFNGVKYKLGAKNKFEAPHTL 75
Query: 422 ELREIK 439
++++K
Sbjct: 76 AIKQLK 81
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/88 (23%), Positives = 42/88 (47%)
Frame = +2
Query: 170 LSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRVIGHLINN 349
+ N L+ +K + DR + ++++ + E + K E +++ R+ + + N
Sbjct: 849 IKNEEALKENLKLSMLLDREKSEKVKVQKELEEVEKQGREKLLEKERE-FRKTMEEMEQN 907
Query: 350 ESESWNELTAKYDPENKFTAKYEKELRE 433
E E +N L KY+ ++K K LRE
Sbjct: 908 E-EIFNVLERKYNEQHKKVMKMNDVLRE 934
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 254 EHIREALETECAKCTEAQKKGTRR---VIGHLINNESESWNELTAKYDPENKFTAKYEKE 424
E R A ET+ + E+ + TR+ + L+ ESE ++++ + D E + E+E
Sbjct: 1064 ETARRAAETQLREEQESCLEKTRKAEELTNQLMRKESEL-SQISIRNDEELAARQQLERE 1122
Query: 425 LREIKA 442
+REI+A
Sbjct: 1123 IREIRA 1128
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 254 EHIREALETECAKCTEAQKKGTRR---VIGHLINNESESWNELTAKYDPENKFTAKYEKE 424
E R A ET+ + E+ + TR+ + L+ ESE ++++ + D E + E+E
Sbjct: 1064 ETARRAAETQLREEQESCLEKTRKAEELTNQLMRKESEL-SQISIRNDEELAARQQLERE 1122
Query: 425 LREIKA 442
+REI+A
Sbjct: 1123 IREIRA 1128
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 254 EHIREALETECAKCTEAQKKGTRR---VIGHLINNESESWNELTAKYDPENKFTAKYEKE 424
E R A ET+ + E+ + TR+ + L+ ESE ++++ + D E + E+E
Sbjct: 1064 ETARRAAETQLREEQESCLEKTRKAEELTNQLMRKESEL-SQISIRNDEELAARQQLERE 1122
Query: 425 LREIKA 442
+REI+A
Sbjct: 1123 IREIRA 1128
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/98 (19%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Frame = +2
Query: 158 LDEVLSNSRLLQP-YIKCILDTDRCAPDAKELKEHIREALET----ECAKCTEAQKKGTR 322
++++L +++ Y+K D D K+L+++ E + +A+K+G +
Sbjct: 1500 INKLLQKLHIIEDSYLKGPKPIDTVREDVKQLEKYRNRGAEILQQLSTSNIEDAEKEGLK 1559
Query: 323 RVIGHLINNESESWNELTAKYDPENKFTAKYEKELREI 436
++NN + + + +N+ TAK ++ L E+
Sbjct: 1560 HRFVLMLNNYDDILRSIENEIRDDNELTAKNQEILAEL 1597
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/98 (19%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Frame = +2
Query: 158 LDEVLSNSRLLQP-YIKCILDTDRCAPDAKELKEHIREALET----ECAKCTEAQKKGTR 322
++++L +++ Y+K D D K+L+++ E + +A+K+G +
Sbjct: 1500 INKLLQKLHIIEDSYLKGPKPIDTVREDVKQLEKYRNRGAEILQQLSTSNIEDAEKEGLK 1559
Query: 323 RVIGHLINNESESWNELTAKYDPENKFTAKYEKELREI 436
++NN + + + +N+ TAK ++ L E+
Sbjct: 1560 HRFVLMLNNYDDILRSIENEIRDDNELTAKNQEILAEL 1597
>Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical
protein R53.1b protein.
Length = 510
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 PDAKELKEHIREALETECAKCTEAQKKGTRRVI-GHLINNESESWNELTAKY 385
P+ K + +ETE ++ EA R ++ GH++ +S +W ++ K+
Sbjct: 231 PELKNKFFKTKLTIETESSETMEAVVTSLRELLAGHIVYYDSHAWLDIVTKW 282
>Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical
protein R53.1a protein.
Length = 519
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 PDAKELKEHIREALETECAKCTEAQKKGTRRVI-GHLINNESESWNELTAKY 385
P+ K + +ETE ++ EA R ++ GH++ +S +W ++ K+
Sbjct: 240 PELKNKFFKTKLTIETESSETMEAVVTSLRELLAGHIVYYDSHAWLDIVTKW 291
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +2
Query: 164 EVLSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRVIGHLI 343
++L+ ++ L PY+ CIL+ + D K +E+ C + T + R++
Sbjct: 464 QILTAAKQLVPYVSCILNMNAMI-DPKRCHPPDPAPMESICLEITGIEPNSQNRILAIEK 522
Query: 344 NNESESWNELTAK 382
E+ N+ K
Sbjct: 523 EEENRRLNQEAKK 535
>Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 242 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESESWNELTAKYDPENKFTAKYEK 421
KELKE RE + AK ++ I LIN+ +E+ EL K+D + A Y++
Sbjct: 58 KELKE-AREESDDALAK----RQATADSQISELINSNNEAIRELQKKFDED---AAAYDR 109
Query: 422 ELRE 433
++E
Sbjct: 110 SIKE 113
>Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 242 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESESWNELTAKYDPENKFTAKYEK 421
KELKE RE + AK ++ I LIN+ +E+ EL K+D + A Y++
Sbjct: 58 KELKE-AREESDDALAK----RQATADSQISELINSNNEAIRELQKKFDED---AAAYDR 109
Query: 422 ELRE 433
++E
Sbjct: 110 SIKE 113
>Z71258-14|CAN86574.1| 201|Caenorhabditis elegans Hypothetical
protein C01H6.8a protein.
Length = 201
Score = 27.1 bits (57), Expect = 9.4
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +2
Query: 185 LLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTE-AQKKGTRRVIGHLIN----- 346
LL + I TD C+PD K K+H R E E T A+ K V+ +
Sbjct: 5 LLISVVSFISFTDSCSPDVKFEKDHHRRK-ELEDKFITNLAELKNHEEVLLKAVEMMKHA 63
Query: 347 NESESWNELTAKYDPENKFTAKYEKELREIK 439
NE + +E Y K A+ EKEL+ K
Sbjct: 64 NEKKDLDENELDY---KKRIAEIEKELKATK 91
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +2
Query: 203 KCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRV 328
KC + +CA + +++ + + ++ C KC + KK + V
Sbjct: 1273 KCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNV 1314
>AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical
protein Y22D7AR.7 protein.
Length = 767
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 305 QKKGTRRVIGHLINNESESWNELTAKYDPEN 397
Q++ T V+ +N E +WN + KY PE+
Sbjct: 544 QERVTHIVMLGQVNEEDANWNRMFCKYFPES 574
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,044,162
Number of Sequences: 27780
Number of extensions: 218805
Number of successful extensions: 631
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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