Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_N11
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    27   0.18 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.31 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.8  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   8.8  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 705 YNILXTDKPLFYTNNIISTVLYNFL 779
           YNIL   + +F+ N+ ++ +LYN +
Sbjct: 332 YNILYFSRIMFHINSAVNPILYNII 356


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 672 PARAPSHVDIP--YNILXTDKPLFYTNNIISTVLYNFL 779
           P     H++I   YNIL   + + Y N+ I+ +LYN +
Sbjct: 317 PEEQVYHLEIEKYYNILYFCRIMVYLNSAINPILYNLM 354


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/65 (20%), Positives = 31/65 (47%)
 Frame = -1

Query: 473 AVIVFRVHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVF 294
           +++   +  ++  FS +TV+  +   +++ C+L +K      LV    TF      +L +
Sbjct: 63  SIVAMVMGTIVNAFSCYTVLAPVLCKRQQYCQLMSKLLGNHQLVYNCHTFGRFLAPNLTY 122

Query: 293 VFLCL 279
           + + L
Sbjct: 123 LLVAL 127



 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -1

Query: 455 VHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQ 336
           ++ VL ++ DF+     +  K  + ++     T F+++IQ
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQ 342


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 155 PWRSPESAQLKPHTGNH 205
           PW +    Q+K  +GNH
Sbjct: 141 PWFAEHMGQIKVASGNH 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,388
Number of Sequences: 336
Number of extensions: 3005
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)