Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_N11
(809 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 66 6e-12
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 66 7e-12
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 50 4e-07
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 29 0.59
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.8
SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomy... 26 7.3
SPAC1F8.05 |isp3|meu4|sequence orphan|Schizosaccharomyces pombe|... 26 7.3
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 66.1 bits (154), Expect = 6e-12
Identities = 42/136 (30%), Positives = 69/136 (50%)
Frame = +3
Query: 105 AFSIYXFEGKGKXDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQA 284
AFS++ G G+ ++GDLLRA NPTLA I FL + ++
Sbjct: 11 AFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQ---FLQVLNRP 67
Query: 285 KKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPED 464
G E+F++ +++DK+ G++ EL + L +LGEKL + E+ E+ K
Sbjct: 68 NGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV---PV 124
Query: 465 DDGMIPYAAFLKKVMA 512
DGM+ Y F++ ++A
Sbjct: 125 KDGMVNYHDFVQMILA 140
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 65.7 bits (153), Expect = 7e-12
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Frame = +3
Query: 72 LSNHXVERASFAFSIYXFEGKGKXDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXX 251
L++ + AFS++ + G + LG ++R+L +PT A +
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 252 XXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 428
FL + ++ KD D E+ E K++DK+ NG + ELTH L +LGE+L EV
Sbjct: 66 DFTEFLTMMARKMKDTDNE--EEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEV 123
Query: 429 AEVTKDCMDPEDDDGMIPYAAFLKKV 506
A++ ++ D DG+I Y F + +
Sbjct: 124 ADMIREA--DTDGDGVINYEEFSRVI 147
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 50.0 bits (114), Expect = 4e-07
Identities = 34/146 (23%), Positives = 68/146 (46%)
Frame = +3
Query: 75 SNHXVERASFAFSIYXFEGKGKXDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXX 254
S + AF +Y + G ++G +LR+L N T A +
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNELGDAIDEKKF 63
Query: 255 XXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAE 434
F+ + K ++ + E++++ +++DK+ +G + A+ + LGEKL D+EV
Sbjct: 64 MSFV-----SNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQL 118
Query: 435 VTKDCMDPEDDDGMIPYAAFLKKVMA 512
+ ++ DP + G Y F++++MA
Sbjct: 119 MVQEA-DP-TNSGSFDYYDFVQRIMA 142
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 29.5 bits (63), Expect = 0.59
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 273 YSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKD 446
Y+ + + + +D E KL+D +++ + EL + ALG + SEV ++ +D
Sbjct: 24 YAPLRVEITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRD 81
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = +3
Query: 285 KKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPED 464
+K ++ E+ +L+D +E G + L L E +DD E+ + ++ D
Sbjct: 101 EKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEF--DLD 158
Query: 465 DDGMIPYAAFLKKVM 509
DG I F+ +M
Sbjct: 159 QDGEINEQEFIAIMM 173
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 665 APPEELSPPRALPAPVPQSRASVF*GPSHRT 573
APP PP A P P+P S A P R+
Sbjct: 1720 APPMPAGPPSAPPPPLPASSAPSVPNPGDRS 1750
>SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1142
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 399 LGEKLDDSEVAEVTKDCMDPED 464
L EK+ D + + DC+DP+D
Sbjct: 777 LAEKVKDFQTMVILLDCLDPKD 798
>SPAC1F8.05 |isp3|meu4|sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 182
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 777 ESCTKQLILCCSYKKGVCPYXRCYTGCRR 691
ESC K+ CC KK C GC R
Sbjct: 78 ESCEKKKPKCCEKKKPKCCESEQNNGCGR 106
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,807,187
Number of Sequences: 5004
Number of extensions: 48848
Number of successful extensions: 131
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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