Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_N11
(809 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1 pro... 182 2e-47
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 31 0.042
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 27 0.68
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 27 0.68
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 27 0.90
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 26 1.2
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 26 1.2
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 25 2.8
AY187043-1|AAO39757.1| 171|Anopheles gambiae putative antennal ... 23 8.4
AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative odorant-b... 23 8.4
>AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1
protein protein.
Length = 160
Score = 182 bits (442), Expect = 2e-47
Identities = 86/146 (58%), Positives = 104/146 (71%)
Frame = +3
Query: 72 LSNHXVERASFAFSIYXFEGKGKXDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXX 251
L + +E+A F FS+Y +EG G+ DA +LG+ LRALN NPT+ I
Sbjct: 5 LKDVEIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPTIELIGKMGGTQKRGEKKIK 64
Query: 252 XXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVA 431
FLPI+SQ KK+K+QG +EDFLECLKLYDKNE+G ML AELTH+L ALGE+LDD E+
Sbjct: 65 FEEFLPIFSQVKKEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELD 124
Query: 432 EVTKDCMDPEDDDGMIPYAAFLKKVM 509
V KDCMDPEDDDG IPYA FLKK+M
Sbjct: 125 NVMKDCMDPEDDDGNIPYAPFLKKMM 150
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 31.1 bits (67), Expect = 0.042
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 684 PSHVDIPYNILXTDKPLFYT-NNIISTVLYNFLPLTV 791
P+ DI + I+ K LFYT N I+ TVL +FL + V
Sbjct: 217 PTETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLV 253
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 27.1 bits (57), Expect = 0.68
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 690 HVDIPYNILXTDKPLFYTNNII 755
++DI +NI K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 27.1 bits (57), Expect = 0.68
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 690 HVDIPYNILXTDKPLFYTNNII 755
++DI +NI K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 26.6 bits (56), Expect = 0.90
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 690 HVDIPYNILXTDKPLFYTNNIISTVL-YNFLPLTV 791
++DI +NI K LFYT N+I + +FL + V
Sbjct: 226 YLDITFNITMRRKTLFYTVNLIIPCMGISFLTILV 260
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 672 PARAPSHVDIPYNILXTDKPLFYTNNII 755
P A + DI +NI K LFYT N+I
Sbjct: 233 PCCAEPYPDIFFNITLRRKTLFYTVNLI 260
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 26.2 bits (55), Expect = 1.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 402 GEKLDDSEVAEVTKDCMDPEDDDG 473
G K+++ +AEV K +D EDD G
Sbjct: 1250 GLKMENGVIAEVEKSQVDGEDDTG 1273
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 25.0 bits (52), Expect = 2.8
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 696 DIPYNILXTDKPLFYT-NNIISTVLYNFLPLTV 791
DI +NI K LFYT N II V +FL + V
Sbjct: 228 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLV 260
>AY187043-1|AAO39757.1| 171|Anopheles gambiae putative antennal
carrier protein AP-1 protein.
Length = 171
Score = 23.4 bits (48), Expect = 8.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 372 AELTHTLLALGEKLDDSEVAEVTKDCMDP 458
AE ++ DD +VT++C+DP
Sbjct: 64 AESFKCVIVKNSTKDDVNKVQVTRECLDP 92
>AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative
odorant-binding protein OBPjj17 protein.
Length = 285
Score = 23.4 bits (48), Expect = 8.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 419 VVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 312
V+K L+ CK +V +L +H + Q + ++IF
Sbjct: 130 VLKALSYCKPKVTQLQGRHVRTDEEMEQCEIAEDIF 165
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,768
Number of Sequences: 2352
Number of extensions: 13076
Number of successful extensions: 37
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -