Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_N09
         (892 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   3.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   4.3  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   4.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   7.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   7.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.8  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 523 PHKHNLLPRKGTK 485
           PH HNL+ R+G K
Sbjct: 129 PHPHNLVGREGCK 141


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 283 VLSSDGNYALSGSWDKTLRLWDL 351
           VLS  G   +S +W  +LR  D+
Sbjct: 260 VLSDHGTQFISNTWQNSLRAADI 282


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 667 GVMCQILTQSCQPHYC 714
           G +C I T  C P+ C
Sbjct: 100 GALCNINTDDCSPNPC 115


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 711 IMGLA*LGENLTHDTQSLCPSSWMV 637
           + G   +  NLT  T SLC  SW V
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAV 188


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 711 IMGLA*LGENLTHDTQSLCPSSWMV 637
           + G   +  NLT  T SLC  SW V
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAV 188


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 815 VSPDGSLCASGGKDMK 862
           VSP+GSL  S  ++M+
Sbjct: 18  VSPEGSLLPSNSREMR 33


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 664 LGVMCQILTQSCQPHYC 714
           LG +C+I    C+P  C
Sbjct: 253 LGYICEINVDDCRPGAC 269


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = +1

Query: 7   LLTRATGPDASVEVVALQTIFKNVLKH 87
           ++ +   PD  + ++ +  IFKN+L++
Sbjct: 376 IVDKLLNPDLGLSLLQVAQIFKNLLEN 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,570
Number of Sequences: 336
Number of extensions: 5194
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)