Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_N08
(799 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 341 1e-92
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 301 1e-80
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 247 2e-64
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 236 5e-61
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 188 1e-46
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 182 7e-45
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 182 7e-45
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 182 9e-45
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 182 1e-44
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 179 9e-44
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 178 2e-43
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 177 2e-43
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 177 2e-43
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 174 2e-42
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 173 4e-42
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 171 1e-41
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 171 2e-41
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 170 3e-41
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 169 7e-41
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 167 3e-40
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 167 4e-40
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 166 5e-40
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 165 1e-39
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 165 1e-39
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 165 2e-39
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 164 2e-39
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 164 2e-39
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 164 3e-39
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 161 2e-38
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 161 2e-38
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 160 3e-38
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 159 6e-38
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 159 1e-37
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 158 1e-37
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 158 1e-37
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 158 2e-37
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 157 2e-37
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 157 2e-37
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 157 2e-37
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 157 3e-37
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 157 4e-37
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 157 4e-37
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 157 4e-37
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 156 5e-37
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 156 5e-37
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 155 9e-37
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 155 1e-36
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 155 1e-36
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 155 1e-36
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 155 1e-36
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 154 2e-36
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 154 3e-36
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 154 3e-36
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 154 3e-36
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 154 3e-36
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 154 3e-36
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 154 3e-36
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 153 4e-36
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 153 5e-36
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 153 6e-36
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 152 9e-36
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 152 9e-36
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 152 9e-36
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 152 1e-35
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 152 1e-35
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 152 1e-35
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 152 1e-35
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 151 1e-35
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 151 2e-35
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 151 2e-35
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 151 3e-35
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 151 3e-35
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 150 3e-35
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 150 5e-35
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 150 5e-35
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 149 6e-35
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 149 8e-35
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 149 8e-35
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 149 8e-35
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 149 8e-35
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 149 8e-35
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 149 1e-34
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 149 1e-34
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 149 1e-34
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 149 1e-34
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 148 1e-34
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 148 1e-34
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 148 2e-34
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 148 2e-34
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 147 2e-34
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 147 2e-34
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 147 2e-34
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 147 2e-34
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 147 3e-34
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 147 3e-34
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 147 3e-34
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 146 4e-34
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 146 4e-34
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 146 4e-34
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 146 6e-34
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 146 6e-34
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 146 6e-34
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 146 7e-34
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 146 7e-34
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 145 1e-33
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 145 1e-33
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 145 1e-33
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 145 1e-33
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 145 1e-33
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 144 2e-33
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 144 2e-33
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 144 2e-33
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 144 2e-33
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 144 2e-33
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 144 3e-33
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 144 3e-33
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 144 3e-33
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 144 3e-33
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 143 4e-33
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 142 7e-33
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 142 7e-33
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 142 7e-33
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 142 7e-33
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 142 9e-33
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 142 9e-33
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 142 1e-32
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 142 1e-32
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 142 1e-32
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 142 1e-32
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 141 2e-32
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 141 2e-32
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 141 2e-32
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 141 2e-32
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 141 2e-32
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 141 2e-32
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 140 3e-32
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 140 3e-32
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 140 3e-32
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 140 3e-32
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 140 4e-32
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 140 4e-32
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 140 5e-32
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 140 5e-32
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 140 5e-32
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 140 5e-32
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 140 5e-32
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 140 5e-32
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 140 5e-32
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 140 5e-32
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 140 5e-32
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 139 9e-32
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 139 9e-32
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 138 1e-31
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 138 1e-31
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 138 1e-31
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 138 1e-31
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 138 1e-31
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 138 1e-31
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 138 2e-31
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 138 2e-31
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 138 2e-31
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 138 2e-31
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 138 2e-31
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 138 2e-31
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 137 3e-31
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 137 3e-31
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 137 3e-31
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 137 3e-31
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 137 3e-31
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 137 3e-31
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 137 3e-31
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 136 5e-31
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 136 5e-31
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 136 5e-31
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 136 6e-31
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 136 8e-31
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 136 8e-31
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 136 8e-31
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 136 8e-31
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 135 1e-30
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 135 1e-30
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 135 1e-30
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 134 2e-30
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 134 2e-30
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 134 2e-30
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 134 2e-30
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 134 2e-30
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 134 2e-30
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 134 2e-30
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 134 3e-30
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 134 3e-30
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 133 4e-30
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 133 4e-30
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 133 4e-30
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 133 6e-30
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 133 6e-30
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 133 6e-30
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 132 7e-30
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 132 7e-30
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 132 7e-30
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 132 7e-30
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 132 7e-30
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 132 1e-29
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 132 1e-29
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 132 1e-29
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 132 1e-29
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 132 1e-29
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 132 1e-29
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 132 1e-29
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 132 1e-29
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 132 1e-29
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 132 1e-29
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 132 1e-29
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 132 1e-29
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 132 1e-29
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 132 1e-29
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 132 1e-29
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 132 1e-29
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 131 2e-29
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 131 2e-29
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 131 2e-29
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 131 2e-29
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 131 2e-29
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 131 2e-29
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 131 2e-29
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 131 2e-29
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 131 2e-29
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 130 3e-29
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 130 3e-29
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 130 3e-29
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 130 3e-29
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 130 4e-29
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 130 4e-29
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 130 4e-29
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 130 4e-29
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 130 4e-29
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 130 4e-29
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 130 4e-29
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 130 4e-29
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 130 4e-29
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 130 5e-29
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 130 5e-29
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 130 5e-29
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 130 5e-29
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 129 7e-29
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 129 7e-29
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 129 9e-29
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 129 9e-29
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 129 9e-29
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 129 9e-29
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 129 9e-29
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 128 1e-28
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 128 1e-28
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 128 1e-28
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 128 1e-28
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 128 1e-28
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 128 1e-28
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 128 1e-28
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 128 2e-28
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 128 2e-28
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 128 2e-28
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 128 2e-28
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 128 2e-28
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 128 2e-28
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 127 3e-28
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 127 3e-28
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 127 3e-28
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 127 3e-28
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 127 3e-28
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 127 3e-28
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 127 4e-28
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 127 4e-28
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 127 4e-28
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 127 4e-28
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 127 4e-28
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 127 4e-28
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 126 5e-28
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 126 5e-28
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 126 5e-28
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 126 5e-28
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 126 5e-28
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 126 6e-28
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 126 6e-28
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 126 6e-28
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 126 6e-28
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 126 6e-28
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 126 6e-28
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 126 9e-28
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 126 9e-28
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 126 9e-28
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 126 9e-28
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 126 9e-28
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 126 9e-28
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 126 9e-28
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 126 9e-28
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 125 1e-27
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 125 1e-27
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 125 1e-27
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 125 1e-27
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 125 1e-27
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 125 1e-27
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 125 1e-27
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 125 1e-27
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 125 1e-27
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 125 1e-27
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 124 2e-27
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 124 2e-27
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 124 2e-27
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 124 3e-27
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 124 3e-27
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 124 3e-27
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 124 3e-27
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 124 3e-27
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 124 3e-27
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 124 3e-27
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 124 3e-27
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 124 3e-27
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 124 3e-27
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 123 5e-27
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 123 5e-27
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 123 5e-27
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 123 5e-27
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 123 5e-27
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 123 5e-27
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 123 6e-27
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 123 6e-27
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 123 6e-27
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 123 6e-27
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 122 8e-27
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 122 8e-27
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 122 8e-27
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 122 8e-27
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 122 8e-27
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 122 8e-27
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 122 1e-26
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 122 1e-26
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 122 1e-26
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 122 1e-26
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 122 1e-26
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 122 1e-26
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 122 1e-26
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 122 1e-26
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 122 1e-26
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 121 2e-26
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 121 2e-26
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 121 2e-26
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 121 2e-26
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 121 2e-26
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 121 2e-26
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 121 2e-26
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 121 2e-26
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 121 2e-26
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 121 2e-26
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 121 2e-26
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 121 2e-26
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 121 2e-26
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 121 2e-26
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 121 2e-26
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 121 2e-26
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 120 3e-26
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 120 3e-26
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 120 3e-26
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 120 3e-26
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 120 3e-26
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 120 3e-26
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 120 3e-26
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 120 3e-26
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 120 3e-26
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 120 3e-26
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 120 3e-26
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 120 4e-26
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 120 4e-26
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 120 4e-26
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 120 4e-26
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 120 4e-26
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 120 4e-26
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 120 6e-26
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 120 6e-26
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 120 6e-26
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 119 7e-26
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 119 7e-26
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 119 7e-26
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 119 7e-26
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 119 7e-26
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 119 1e-25
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 119 1e-25
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 119 1e-25
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 118 1e-25
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 118 1e-25
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 118 1e-25
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 118 1e-25
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 118 1e-25
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 118 1e-25
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 118 1e-25
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 118 2e-25
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 118 2e-25
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 118 2e-25
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 118 2e-25
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 118 2e-25
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 118 2e-25
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 118 2e-25
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 118 2e-25
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 118 2e-25
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 118 2e-25
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 118 2e-25
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 117 4e-25
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 117 4e-25
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 117 4e-25
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 117 4e-25
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 117 4e-25
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 117 4e-25
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 117 4e-25
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 117 4e-25
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 117 4e-25
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 116 5e-25
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 116 5e-25
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 116 5e-25
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 116 5e-25
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 116 5e-25
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 116 5e-25
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 116 7e-25
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 116 7e-25
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 116 7e-25
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 116 7e-25
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 116 9e-25
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 116 9e-25
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 116 9e-25
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 116 9e-25
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 116 9e-25
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 115 1e-24
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 115 1e-24
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 115 2e-24
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 115 2e-24
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 115 2e-24
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 115 2e-24
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 115 2e-24
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 115 2e-24
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 115 2e-24
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 114 2e-24
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 114 2e-24
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 114 2e-24
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 114 2e-24
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 114 3e-24
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 114 3e-24
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 114 3e-24
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 114 3e-24
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 114 3e-24
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 113 4e-24
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 113 4e-24
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 113 4e-24
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 113 4e-24
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 113 4e-24
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 113 4e-24
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 113 4e-24
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 113 4e-24
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 98 4e-24
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 98 4e-24
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 113 5e-24
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 113 5e-24
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 113 5e-24
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 113 5e-24
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 113 5e-24
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 113 6e-24
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 113 6e-24
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 113 6e-24
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 113 6e-24
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 113 6e-24
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 112 8e-24
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 112 8e-24
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 112 8e-24
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 112 8e-24
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 112 8e-24
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 112 1e-23
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 111 1e-23
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 111 2e-23
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 111 2e-23
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 111 2e-23
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 111 2e-23
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 111 2e-23
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 111 2e-23
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 111 2e-23
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 111 2e-23
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 111 2e-23
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 111 3e-23
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 111 3e-23
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 111 3e-23
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 111 3e-23
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 111 3e-23
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 111 3e-23
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 110 3e-23
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 110 3e-23
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 110 3e-23
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 110 3e-23
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 110 3e-23
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 110 3e-23
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 110 3e-23
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 110 3e-23
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 110 3e-23
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 341 bits (838), Expect = 1e-92
Identities = 160/236 (67%), Positives = 201/236 (85%), Gaps = 3/236 (1%)
Frame = +3
Query: 99 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 272
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 273 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 452
RAI+PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQIQKV+
Sbjct: 62 RAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVI 121
Query: 453 IALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVVGTPGRVYDMITRRALHANTIKLFV 629
+ALGD++ A CHACIGGTNVR ++++L++ H+VVGTPGRV+DM+ RR L IK+FV
Sbjct: 122 LALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFV 181
Query: 630 LDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
LDEADEMLSRGFKDQI+++F+ L+ +QV+LLSATMP DVLEV++ FM DP+RILV
Sbjct: 182 LDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILV 237
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 301 bits (739), Expect = 1e-80
Identities = 142/206 (68%), Positives = 173/206 (83%)
Frame = +3
Query: 180 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 359
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
+LQ +D +RE QALILAPTRELA QIQK ++ALGD++N +CHACIGGTNV EDIR+L+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
G HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI+DV++ L QV+
Sbjct: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query: 720 LLSATMPDDVLEVSRCFMXDPVRILV 797
L+SAT+P ++LE++ FM DP+RILV
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILV 241
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 247 bits (605), Expect = 2e-64
Identities = 125/206 (60%), Positives = 155/206 (75%)
Frame = +3
Query: 180 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 359
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFS+S
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVS 95
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
+LQ +D Q L+ ALGD++N +CHACIGGTNV EDIR+L+
Sbjct: 96 VLQCLDI-----QGLL----------------ALGDYMNVQCHACIGGTNVGEDIRKLDY 134
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
G HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI+DV++ L QV+
Sbjct: 135 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 194
Query: 720 LLSATMPDDVLEVSRCFMXDPVRILV 797
L+SAT+P ++LE++ FM DP+RILV
Sbjct: 195 LISATLPHEILEMTNKFMTDPIRILV 220
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 236 bits (577), Expect = 5e-61
Identities = 108/214 (50%), Positives = 156/214 (72%), Gaps = 1/214 (0%)
Frame = +3
Query: 159 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 338
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I G+DV+AQAQSGTGK
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGK 106
Query: 339 TATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 518
T TF+I LQ+ID + R+ Q +ILAP RELA+QI VV +G +LN + CIGGT+ +E
Sbjct: 107 TGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQE 166
Query: 519 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
+ + GVH+++ TPGR+ DM+ + L A ++L V+DEAD+ML +GF D ++ KM+
Sbjct: 167 TREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNFAEILKMV 226
Query: 699 SADVQVILLSATMPDDVLEVSRCFMXD-PVRILV 797
D+Q+ L SAT P +++E+S+ F+ D +ILV
Sbjct: 227 PGDIQIALFSATFPQEIIELSKQFLRDGTAKILV 260
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 188 bits (458), Expect = 1e-46
Identities = 95/201 (47%), Positives = 125/201 (62%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF+D LK ELL GI+ GFEKPS IQ+ AI I GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
++ + + QALI+ PTRELA Q +VV LG H C GGTN+R+DI +L VH
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
++VGTPGRV D+ +R+ + LF++DEAD+MLSR FK I + L Q +L S
Sbjct: 167 ILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFS 226
Query: 729 ATMPDDVLEVSRCFMXDPVRI 791
AT P V E + P I
Sbjct: 227 ATFPLTVKEFMVKHLHKPYEI 247
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 182 bits (444), Expect = 7e-45
Identities = 93/201 (46%), Positives = 129/201 (64%), Gaps = 2/201 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
FDD+ LKE LL+ I GFE+PS IQ +I ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 372 IDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
D S ++ +ALILAPTRELA Q+ + ++ LG H GG + IR L++GV
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGV 125
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+VVGTPGRV D+I R++L N I VLDEADEML+ GF D + ++ K L D Q +L
Sbjct: 126 DIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLF 185
Query: 726 SATMPDDVLEVSRCFMXDPVR 788
SATMP + +++R +M + +
Sbjct: 186 SATMPPQIKKLARNYMKEDTK 206
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 182 bits (444), Expect = 7e-45
Identities = 94/201 (46%), Positives = 125/201 (62%), Gaps = 1/201 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
VE+F D+ L+EELL+ I GF +PS IQ AI ++GRDVI QAQ+GTGKTA F + +
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPL 63
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES 539
LQ+ID + R QAL+L PTRELA Q+ + AL HL + + GG + L
Sbjct: 64 LQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRR 123
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
G VVVGTPGR+ D I R L +++ VLDEADEML GF++ I + + VQ
Sbjct: 124 GAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQSA 183
Query: 720 LLSATMPDDVLEVSRCFMXDP 782
SATMPD +LE++R F+ +P
Sbjct: 184 FFSATMPDGILELARRFLREP 204
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 182 bits (443), Expect = 9e-45
Identities = 89/203 (43%), Positives = 129/203 (63%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF D+ L E++L+ + GFE+PS IQ +AI +QG+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
++ R QAL+L PTRELA Q+ + + +G H K A GG ++ IR L GV
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVD 126
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
VV+GTPGR+ D + R L + +++ VLDEADEML GF + I + + A+ Q +L S
Sbjct: 127 VVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFS 186
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP ++ ++ +M DP+ I V
Sbjct: 187 ATMPPEIRRLAGRYMRDPITISV 209
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 182 bits (442), Expect = 1e-44
Identities = 84/205 (40%), Positives = 134/205 (65%)
Frame = +3
Query: 180 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 359
+ TF+ M L++ELLRGI A+GF +P +QQRA++P IQGRDV+ Q TGKT S+S
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
+L D S+++ Q LIL TR+L ++ +++ALG LN HAC G ++++DI ++
Sbjct: 80 VLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGNSIQDDISVVQQ 139
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
GV +V+GTP RV++++ R+ + +K+ +LDEADEML K ++ +FK L Q +
Sbjct: 140 GVQIVLGTPDRVFELVQRKEISFAHLKMIILDEADEMLIDESKSLVYCIFKYLPPKPQYV 199
Query: 720 LLSATMPDDVLEVSRCFMXDPVRIL 794
L++AT+ D+L+ F +P+ I+
Sbjct: 200 LVTATLSQDILDFIEKFFNNPLVIM 224
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 179 bits (435), Expect = 9e-44
Identities = 85/108 (78%), Positives = 97/108 (89%), Gaps = 1/108 (0%)
Frame = +3
Query: 129 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 305
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCI+G D
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHD 69
Query: 306 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 449
VIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPTRELAQQ K+
Sbjct: 70 VIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 178 bits (433), Expect = 2e-43
Identities = 96/212 (45%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Frame = +3
Query: 162 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 341
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I GRD+ AQAQSGTGKT
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKT 89
Query: 342 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 521
F+++ LQ D S Q L+LA TRE+A Q LG + A+ GG+ + D
Sbjct: 90 GAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAAD 149
Query: 522 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 701
LE H+VVGTPGRV MI L + IKLFV+DEADEML GF++Q+ +F+ ++
Sbjct: 150 KVALEKKPHIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFRRIT 209
Query: 702 --ADVQVILLSATMPDDVLEVSRCFMXDPVRI 791
+VQ+ + SAT ++ L VS + +PV I
Sbjct: 210 NKDEVQIAMFSATYDEEELRVSEEILINPVII 241
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 177 bits (432), Expect = 2e-43
Identities = 85/200 (42%), Positives = 131/200 (65%), Gaps = 1/200 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 359
+E+F ++ L +E+L + GF P+ IQ++AI I+G RD++ QAQ+GTGKTA F I
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
IL+ ID S R QALILAPTRELA Q+ + + ++ GG ++ IR+L
Sbjct: 61 ILETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRR 120
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
GV +VVGTPGR+ D I+RR + + VLDEADEML+ GF D + ++ K +S + +++
Sbjct: 121 GVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRML 180
Query: 720 LLSATMPDDVLEVSRCFMXD 779
L SAT+PD ++++++ +M +
Sbjct: 181 LFSATLPDSIMKLAKNYMRE 200
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 177 bits (432), Expect = 2e-43
Identities = 98/226 (43%), Positives = 134/226 (59%), Gaps = 1/226 (0%)
Frame = +3
Query: 117 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 296
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI +
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT 72
Query: 297 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 473
GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PTRELA Q +V LG H+
Sbjct: 73 GRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIP 132
Query: 474 NAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 653
N + GGT +R+DI +L+ VH++VGTPGR+ D+ ++ N +FV+DEAD++L
Sbjct: 133 NLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLL 192
Query: 654 SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRI 791
S F I + + QV+L SAT P V E M P I
Sbjct: 193 SEDFMPVIEQTLALCPQERQVMLFSATFPWTVKEFKDQHMVQPYEI 238
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 174 bits (424), Expect = 2e-42
Identities = 89/200 (44%), Positives = 125/200 (62%), Gaps = 1/200 (0%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 365
+TF + + EELL+ I GFE+P+ IQ AI + G+DV QAQ+GTGKTA F I I+
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64
Query: 366 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESG 542
+++D + QAL+L+PTRELA Q + L + I GG + +R L+
Sbjct: 65 ERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALKGT 124
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
V VV+GTPGRV D I R LH +++ +F+LDEAD+ML GF++ I D+F+ D Q IL
Sbjct: 125 VQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQTIL 184
Query: 723 LSATMPDDVLEVSRCFMXDP 782
SATMP +L+++R F DP
Sbjct: 185 FSATMPQPILDITRRFQRDP 204
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 173 bits (421), Expect = 4e-42
Identities = 99/230 (43%), Positives = 131/230 (56%), Gaps = 5/230 (2%)
Frame = +3
Query: 123 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCI 293
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI +
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDP 128
Query: 294 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 473
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPTRELA QI V +G +
Sbjct: 129 SNRHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
Query: 474 NAKCHAC-IGGTNVREDIR-QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 647
A IGG D + + S H+ + TPGR D+I L K+ VLDEAD+
Sbjct: 189 PGLDIAIFIGGAQRVVDAQARAASHPHICICTPGRALDLIVSGHLRVQNFKMAVLDEADQ 248
Query: 648 MLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
MLS F +Q++D+ + DVQ++L SAT+ + + FM DP RIL+
Sbjct: 249 MLSDNFIEQVNDIMEYFPEDVQILLFSATISQSIFHIMNTFMNDPFRILI 298
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 171 bits (417), Expect = 1e-41
Identities = 82/203 (40%), Positives = 128/203 (63%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+FD++ L E + R I +G+E+P+ +Q P G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
+I R AL++ PTRELA Q+ + AL H + A GG ++ E +++LE+G
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAE 140
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
++VGTPGR+YD I RR L + + LDEADEML+ GF +++ + L D Q +L S
Sbjct: 141 IIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLLFS 200
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
AT+P D+ ++ R ++ DP IL+
Sbjct: 201 ATVPADIEQIIRDYLTDPETILL 223
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 171 bits (416), Expect = 2e-41
Identities = 80/203 (39%), Positives = 122/203 (60%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF ++ L + LL+ + + GFE+ + IQ I +QG+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
++DT Q +++APTRELA Q+ + + +G H + GG ++ IR L+ H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
++VGTPGR+ D I R+ L ++ VLDEADEML+ GF + I + + Q +L S
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMPD + ++ FM +P I V
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKV 205
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 170 bits (414), Expect = 3e-41
Identities = 84/202 (41%), Positives = 124/202 (61%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+++ + EE+ + I GFE+PS IQ +AI + G DVI QAQ+GTGKTA F I ++++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
+ T R QALIL PTRELA Q+ + L H + GG ++ I+ L+ GV V
Sbjct: 68 VSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQGVQV 126
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
V+GTPGR+ D + R+ L + + +LDEADEML GF D I + + + + Q +L SA
Sbjct: 127 VIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQTLLFSA 186
Query: 732 TMPDDVLEVSRCFMXDPVRILV 797
TMP + ++SR +M DP + +
Sbjct: 187 TMPPAIKKLSRKYMNDPQTVSI 208
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 169 bits (411), Expect = 7e-41
Identities = 101/245 (41%), Positives = 139/245 (56%), Gaps = 1/245 (0%)
Frame = +3
Query: 66 RRSEDWPEDSKNGPSKDQGSY-DGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAY 242
++S+D E +G +KD S ++ T D +V T + E L+
Sbjct: 10 QKSDD--ESGGDGNNKDSNSIAPSAIAINSKKKQTTKD-IVTTQGAQFISESLIGETQTK 66
Query: 243 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 422
+KPSA+ QR I+P G D+I Q+ GT T T ILQ++D + ECQAL+L PT
Sbjct: 67 DLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTH 124
Query: 423 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 602
+LA + Q V+ LG L+AK HA GGT+ ED + L +GV V VGTP V M+ RAL
Sbjct: 125 DLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTPCHVLGMLQGRAL 184
Query: 603 HANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDP 782
+ I++FVLDEADE+L RGFKDQIH + + L Q SA+M + LE+ R +M P
Sbjct: 185 CPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFGFFSASMSHEALEMCRKYMNKP 243
Query: 783 VRILV 797
V I+V
Sbjct: 244 VEIIV 248
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 167 bits (406), Expect = 3e-40
Identities = 80/203 (39%), Positives = 122/203 (60%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF D NL +L++ I GFE+ + IQ + I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
+I+ QA+++APTRELA Q+ + + +G AK GG ++ IR L+ +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
++VGTPGR+ D I RR + N + V+DEADEML+ GF D I + + ++ Q +L S
Sbjct: 124 IIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS 183
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP + ++ FM +P + V
Sbjct: 184 ATMPAPIKRIAERFMTEPEHVKV 206
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 167 bits (405), Expect = 4e-40
Identities = 82/203 (40%), Positives = 121/203 (59%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F ++ + +E + + GF P+ IQ +AI + GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
++D + QA++L PTRELA Q+ + + + A GG ++ + QL+ GVH
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVH 123
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VVGTPGRV D++ R L + +K FVLDEADEMLS GF D + + D Q L S
Sbjct: 124 IVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFS 183
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP + + F+ PV + V
Sbjct: 184 ATMPPSIRMLVNKFLRSPVTVTV 206
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 166 bits (404), Expect = 5e-40
Identities = 80/111 (72%), Positives = 95/111 (85%), Gaps = 1/111 (0%)
Frame = +3
Query: 108 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 284
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 285 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 437
PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQ
Sbjct: 68 PCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +3
Query: 687 FKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
F+ LS ++QV+LLSATMP +VLEV++ FM DPVRILV
Sbjct: 160 FQKLSTNIQVVLLSATMPAEVLEVTKKFMRDPVRILV 196
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 165 bits (401), Expect = 1e-39
Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 1/204 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF +++L +L + G+E PS IQ + I ++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLS 69
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 545
++D RE Q L+LAPTRELAQQ+ + G + + + GG RE + L G
Sbjct: 70 RLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGA 129
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
V+VGTPGRV D + R +L + + VLDEADEML GF D + V D Q +
Sbjct: 130 QVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVKRVVSDTPKDAQRVFF 189
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SAT+PD++ + ++ DP+RI +
Sbjct: 190 SATLPDEISRIVNHYLVDPLRIAI 213
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 165 bits (401), Expect = 1e-39
Identities = 88/205 (42%), Positives = 121/205 (59%), Gaps = 2/205 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISIL 365
TFD + L LL+ I GFE PS IQ+ AI + + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 366 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESG 542
Q ID S + Q LI+APTREL QI + H+ + A GG+N++E R++ G
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRG 121
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
+VV TPGR+ DM+ RR + + VLDEADEML+ GF + I ++ D L
Sbjct: 122 AQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYEDITNILADTPEDKLTWL 181
Query: 723 LSATMPDDVLEVSRCFMXDPVRILV 797
SATMP +V +++ FM DP+ I V
Sbjct: 182 FSATMPREVARIAKEFMHDPLEITV 206
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 165 bits (400), Expect = 2e-39
Identities = 83/198 (41%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+ L +L + GF P+ IQ AI ++GRD + +AQ+GTGKTA FS+ +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 548
++ S + QA+++APTRELA Q+ + LG ++ K GG ++ + +R L+SG H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VVGTPGRV D+ITR LH + F+LDEADEML GF D + + + Q +L S
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
Query: 729 ATMPDDVLEVSRCFMXDP 782
ATMP V E+ F+ +P
Sbjct: 208 ATMPPMVKEIVERFLRNP 225
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 164 bits (399), Expect = 2e-39
Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+++FD+++L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI I
Sbjct: 43 MDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPI 102
Query: 363 LQQIDT--SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
L+Q+D+ R+ QA+++ PTRELA Q+ L + + GG N+ +RQLE
Sbjct: 103 LEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLE 162
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
+G +VVGTPGRV+D + R L N + VLDEAD ML GF+ QI + + + Q
Sbjct: 163 NGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQT 222
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRI 791
+LLSAT+P V ++ +M +PV I
Sbjct: 223 LLLSATLPPVVRRLAESYMHEPVVI 247
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 164 bits (399), Expect = 2e-39
Identities = 81/203 (39%), Positives = 122/203 (60%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF ++ L +E+++ I GFE+ + IQ + I +Q +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
+++ QAL++APTRELA Q+ + + +G + GG ++ IR L+ H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
V+VGTPGR+ D I R L + VLDEADEML+ GF + I + + A+ Q +L S
Sbjct: 123 VIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFS 182
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMPD + ++ FM +P + V
Sbjct: 183 ATMPDPIRRIAERFMNEPELVKV 205
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 164 bits (398), Expect = 3e-39
Identities = 83/206 (40%), Positives = 127/206 (61%), Gaps = 3/206 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF ++ L + +L+ + G+EKPS IQ++AI P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 369 QIDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
++ I R ++LIL PTRELA QIQ+ A G HL + GG + + +L+
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKK 121
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
GV ++V TPGR+ D+ + + + +++FVLDEAD ML GF + V K+L A Q +
Sbjct: 122 GVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTL 181
Query: 720 LLSATMPDDVLEVSRCFMXDPVRILV 797
SATMP +V+++ + +PV++ V
Sbjct: 182 FFSATMPPEVMDLVNGLLKNPVKVAV 207
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 161 bits (391), Expect = 2e-38
Identities = 82/203 (40%), Positives = 122/203 (60%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L E LL + + GF + IQ I P + G+DV+ +AQ+GTGKTA F + L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVH 548
IDTSI++ Q ++LAPTRELA Q+ + + + G D + GG + +QLE G
Sbjct: 77 IDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQ 136
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
VVVGTPGR+ D + R++L + +++ VLDEADEML+ GF + I + + Q+ L S
Sbjct: 137 VVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFS 196
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP + +++ F+ DP I V
Sbjct: 197 ATMPPAIRKIANRFLKDPEHIKV 219
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 161 bits (391), Expect = 2e-38
Identities = 83/203 (40%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
FD E LL+ + G+ PS IQ+ A + GRD++ QAQ+GTGKTA F++ +L++
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGVH 548
+++ + Q L+LAPTRELA Q+ A H + K A GGT+ R I L GV
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVD 192
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
VVVGTPGRV D + + L + + VLDEADEML GF D + + + L + QV+L S
Sbjct: 193 VVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKERQVVLFS 252
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP ++ +S+ ++ DP + +
Sbjct: 253 ATMPPEIRRLSKRYLNDPAEVTI 275
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 160 bits (389), Expect = 3e-38
Identities = 82/203 (40%), Positives = 118/203 (58%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F D NLK +L+ + GF +P+ IQ++AI + G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
ID S + QAL+LAPTRELAQQ+ + GG++ + + L G
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGAR 175
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
VVVGTPGR+ D+I + +L + +K VLDEADEMLS GF D I + D Q +L S
Sbjct: 176 VVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTMLFS 235
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
AT+ V+ ++ ++ P I +
Sbjct: 236 ATLSSRVMSIANRYLHSPESISI 258
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 159 bits (387), Expect = 6e-38
Identities = 85/215 (39%), Positives = 125/215 (58%), Gaps = 3/215 (1%)
Frame = +3
Query: 162 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 341
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P + GRD++ QA +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 342 ATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 512
A F++ +L ++ T QAL+L PTRELA Q+ + + G L A+ GG +
Sbjct: 109 AAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPI 168
Query: 513 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 692
+R L GV VVV TPGR D + R L + + VLDEADEML GF + I + +
Sbjct: 169 GRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILE 228
Query: 693 MLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q +L SAT+P + +++R + DPVRI +
Sbjct: 229 QAPQKRQTVLFSATLPPRMDQIARRHLRDPVRIQI 263
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 159 bits (385), Expect = 1e-37
Identities = 83/204 (40%), Positives = 117/204 (57%), Gaps = 1/204 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF+D+ L E +L+ + GFE PS IQQ I + G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 545
QID S + Q L++APTRELA Q+ + + GG +R L+ G
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA 125
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
VVVGTPGR+ D I R L+ + ++ VLDEADEML GF D + V L + Q L
Sbjct: 126 QVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALF 185
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SATMP+ + +++ FM DP + +
Sbjct: 186 SATMPEPIRRITKRFMNDPQEVKI 209
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 158 bits (384), Expect = 1e-37
Identities = 78/186 (41%), Positives = 114/186 (61%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
FDDMNL E + + G+ P+ +Q RA P I+G+D+I ++++GTGKTA F + +L++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
I R +ALIL PTRELA Q+ + L H K A GG ++++ LE G +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
+VGTPGRV+D I R L + VLDEADEML++GF +++ + L QV+L SA
Sbjct: 151 IVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTRQVLLFSA 210
Query: 732 TMPDDV 749
T+P D+
Sbjct: 211 TVPTDI 216
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 158 bits (384), Expect = 1e-37
Identities = 80/204 (39%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF D+ LK +L + G+EKPS IQ I + GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 545
+D ++ Q L+LAPTRELA Q+ + + H+ A GG +R L G
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+VVGTPGR+ D + R L + + VLDEADEML GF + + + + Q L
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALF 186
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SATMP+ + ++R FM +P + +
Sbjct: 187 SATMPEAIRRITRRFMKEPQEVRI 210
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 158 bits (383), Expect = 2e-37
Identities = 85/203 (41%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L LLR I G+E+PS IQ+++I ++G+DV+ AQ+GTGKTA F++ +L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVH 548
+RE Q L+LAPTRELAQQ+ V + H N K + GG++ R L+ G
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
VVGTPGRV D I R L I+ VLDEADEML GF D + V + Q+ L S
Sbjct: 128 WVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFS 187
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP + V+ + +P I +
Sbjct: 188 ATMPKQIKAVAEKHLREPTEIRI 210
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 157 bits (382), Expect = 2e-37
Identities = 85/207 (41%), Positives = 115/207 (55%), Gaps = 1/207 (0%)
Frame = +3
Query: 174 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 353
+Q + F N L + + F PS IQ + I +QGRD IA AQ+GTGKTA F+
Sbjct: 2 NQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFA 61
Query: 354 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQ 530
+ ILQ + I QALILAPTRELA Q+ + L + N GG ++Q
Sbjct: 62 LPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQ 121
Query: 531 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
L SG VVVGTPGR+ D I + L N +K F+LDEADEML GF + + + + L
Sbjct: 122 LRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKK 181
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRI 791
Q+ L SATMP + +++ ++ DP I
Sbjct: 182 QMALFSATMPYRIRQIANTYLNDPASI 208
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 157 bits (382), Expect = 2e-37
Identities = 80/202 (39%), Positives = 118/202 (58%)
Frame = +3
Query: 180 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 359
+ F D L +ELL+ I FE P+ +QQ+ I ++ +D+I ++Q+G+GKTA F+I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIP 61
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
I Q +D + QAL+L PTRELA Q+++ + +G K A G ++L+
Sbjct: 62 ICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQ 121
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
HVVVGTPGR+ D + + + IK V+DEADEM + GF DQI + K LS +
Sbjct: 122 KTHVVVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTM 181
Query: 720 LLSATMPDDVLEVSRCFMXDPV 785
LLSATMP + +S +M DP+
Sbjct: 182 LLSATMPSAIETLSNRYMKDPI 203
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 157 bits (382), Expect = 2e-37
Identities = 82/207 (39%), Positives = 131/207 (63%)
Frame = +3
Query: 177 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 356
+V T++ M LK EL+ I G+EKPS IQQRAI QG++++ Q+Q+G+GKTATFSI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSI 76
Query: 357 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
L ++ + + + +I++PTRELA Q + + +LG A AC+GG ++ D++ L+
Sbjct: 77 GTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTRACVGGNSLGADVKALQ 132
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G+H V GTPGR+ ++ + A ++ VLDEADEML+ FK I D+ + L Q
Sbjct: 133 KGIHCVSGTPGRILQLLKEHNIQAEKVQSVVLDEADEMLT-SFKSTIMDILQKL-PHAQK 190
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
++++AT+ DV+E++ + + V I V
Sbjct: 191 VIVTATVSADVVELATAHLRNSVEIRV 217
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 157 bits (381), Expect = 3e-37
Identities = 77/198 (38%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+ L E++ I + G+ + + IQ++ I + G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 548
+D SI + Q+LIL PTRELA Q+ + L + A GG ++ IR L++G H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VVGTPGR+ D + RR L+A+ + +LDEADEML+ GF++ I + L + Q +L S
Sbjct: 123 IVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVLFS 182
Query: 729 ATMPDDVLEVSRCFMXDP 782
AT+ +L +++ F +P
Sbjct: 183 ATLAPPILALAKRFQNNP 200
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 157 bits (380), Expect = 4e-37
Identities = 80/204 (39%), Positives = 124/204 (60%), Gaps = 2/204 (0%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISI 362
E F+D L EE+L I G+EKP+ IQ+ + + +D+IAQAQ+GTGKTA F I +
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPL 77
Query: 363 LQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
L++ID + +A+I+ PTRELA QI + + +L K GG ++ + + LE
Sbjct: 78 LERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEK 137
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
GV +VVGTPGR+ D + R L + ++ VLDEAD ML GF D + ++ K + +
Sbjct: 138 GVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTF 197
Query: 720 LLSATMPDDVLEVSRCFMXDPVRI 791
L SATMP ++++++R FM + + +
Sbjct: 198 LFSATMPKEIVDIARKFMKEYIHV 221
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 157 bits (380), Expect = 4e-37
Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 2/204 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 368
F+ + L E LLR I GFE P+ +Q++AI ++ D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 545
+ID + R QALIL+PTREL QI + + A GG ++ E R ++ G
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
++V TPGR+ DMI RR + + I +LDEADEML+ GF + I ++ + L
Sbjct: 124 QIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYEDIVNILSTTPDEKNTWLF 183
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SATMP +V + + FM DP+ I V
Sbjct: 184 SATMPAEVARIGKQFMTDPIEITV 207
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 157 bits (380), Expect = 4e-37
Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 1/198 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+N+ E+ + + GFE+ S IQ AI + +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 548
ID+ QA+IL PTRELA Q+ + + L +L GG + I+ L+ GV
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQ 125
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+++GTPGRV D I R L N IK +LDEADEML GF++ I + + + + Q +L S
Sbjct: 126 IIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLLFS 185
Query: 729 ATMPDDVLEVSRCFMXDP 782
AT+P ++L++++ + +P
Sbjct: 186 ATLPQEILQLAQRYQTNP 203
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 156 bits (379), Expect = 5e-37
Identities = 78/203 (38%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+ L + +++ + G+E PS IQ I + GRDV+ QAQ+GTGKTA F++ +L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 548
+ + Q L+LAPTRELA Q+ + ++ + GG + + + L+ GVH
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
V+VGTPGRV D + R L + +K VLDEADEML GF + + +V + L A QV L S
Sbjct: 137 VIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFS 196
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP + +++ ++ DP+ + +
Sbjct: 197 ATMPPQIRRIAQTYLQDPIEVTI 219
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 156 bits (379), Expect = 5e-37
Identities = 79/206 (38%), Positives = 124/206 (60%), Gaps = 1/206 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+E+F ++L+ LL + G+E PS IQ I + G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLES 539
L ++D +++ Q L+LAPTRELA Q+ + +L GG ++ +RQL
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLAR 162
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
G HV+VGTPGRV D I R++L+ +++ VLDEADEML GF D + + + A+ Q
Sbjct: 163 GAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAERQTA 222
Query: 720 LLSATMPDDVLEVSRCFMXDPVRILV 797
L SATMPD + V+ ++ +P + +
Sbjct: 223 LFSATMPDAIRRVAHRYLREPREVKI 248
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 155 bits (377), Expect = 9e-37
Identities = 83/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF D+ L LL+ + + G+E P+ IQ +AI+ + G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 545
+IDT+ + QAL+L PTRELA Q+ + + N GG ++R +R L+
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNP 125
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
V+VGTPGRV D + R L + +K VLDEADEML GF + I + + D Q L
Sbjct: 126 QVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQTALF 185
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SATMP + ++ + DPV+I
Sbjct: 186 SATMPHQIKRITDQYQKDPVKI 207
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 155 bits (376), Expect = 1e-36
Identities = 84/203 (41%), Positives = 119/203 (58%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L ELL + GFE + IQQ +I + G+D+I QA++G+GKTA FS+ IL +
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 548
I+ QALIL PTRELA Q+ + LG L K A GG + RE LE+GV
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VVGTPGR+ D + R + + +K VLDEAD+ML GF D+I V + L Q +L S
Sbjct: 169 IVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVLFS 228
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
AT P+ + +SR + ++++
Sbjct: 229 ATFPESIEHLSRKYQRHAQQVII 251
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 155 bits (376), Expect = 1e-36
Identities = 80/197 (40%), Positives = 116/197 (58%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+E F + L LL+ + GFE P+ IQ+ AI ++G +++ QA +GTGKTA + + +
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
LQ+I ++ Q LI+ PTRELA Q+ V LG +L + A GG + IR L G
Sbjct: 61 LQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQG 119
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
V V+VGTPGR+ D I R+ A IK+ +LDEADEML GF D I + L+ Q +L
Sbjct: 120 VEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLL 179
Query: 723 LSATMPDDVLEVSRCFM 773
SAT+P + + + F+
Sbjct: 180 FSATLPAPIKTIIKKFL 196
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 155 bits (376), Expect = 1e-36
Identities = 83/204 (40%), Positives = 118/204 (57%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 365
E F M LK +LL+ I GFEKP+ IQ ++I + G D++ QAQ+GTGKTA+F I IL
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL 63
Query: 366 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
++ QAL+L PTRELA Q+ + + +L + + A GG ++ +R L
Sbjct: 64 NRVIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNP 122
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
++VGTPGR+ D + R + + +K VLDEADEML GF I + + Q L
Sbjct: 123 EIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLF 182
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SAT+PD+V E+ FM P IL+
Sbjct: 183 SATLPDEVRELGTKFMKQPEIILI 206
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 155 bits (376), Expect = 1e-36
Identities = 79/203 (38%), Positives = 118/203 (58%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ + L + L + + G+E + IQ I ++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 548
ID +R QAL+L PTRELAQQ+ + + G + + + GG ++R+ ++ L G H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VV TPGR+ D I RR++ I VLDEADEML GF D + + + +V L S
Sbjct: 131 IVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVALFS 190
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP V +++ + +P I V
Sbjct: 191 ATMPKRVRDIANKHLSNPAEISV 213
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 154 bits (374), Expect = 2e-36
Identities = 79/205 (38%), Positives = 124/205 (60%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
V++F D+ LK + +G++ S IQ ++P ++GRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
Q+ SI Q LIL PTREL+ QI+ V L + +C GG + ED++ L+
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNLKKN 128
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
H +VGTPGRV ++ +L I+ FVLDEAD ++++ FK I ++++ L++ VQ+I+
Sbjct: 129 FHGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNKNFKIDIFNIYRYLNSKVQIII 188
Query: 723 LSATMPDDVLEVSRCFMXDPVRILV 797
SAT+P L+ + F+ DPV IL+
Sbjct: 189 CSATIPLYTLQAASKFLLDPVMILM 213
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 154 bits (373), Expect = 3e-36
Identities = 77/191 (40%), Positives = 115/191 (60%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F MN+K E+L+ + GFEKP+ IQ+ + +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
+D SI Q L++APTRELA QI + LG + +K +GG + + L SGV++
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVNI 122
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
VV TPGR+ D++ + + + IK F LDEADE+L GF ++I + L Q +A
Sbjct: 123 VVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQNFFFTA 182
Query: 732 TMPDDVLEVSR 764
T + ++S+
Sbjct: 183 TFDEKTKKLSQ 193
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 154 bits (373), Expect = 3e-36
Identities = 79/198 (39%), Positives = 115/198 (58%), Gaps = 1/198 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F ++NL E+ I GFE+ S IQ AI ++G+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 548
++ + QALIL PTREL Q+ + L + N + GG + +R L
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQ 130
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+V+ TPGR+ D + R ++H + IK+ VLDEADEML GF++ + + K AD Q I+ S
Sbjct: 131 IVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFS 190
Query: 729 ATMPDDVLEVSRCFMXDP 782
ATM DDVL + + F P
Sbjct: 191 ATMTDDVLTLMKKFQNHP 208
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 154 bits (373), Expect = 3e-36
Identities = 75/196 (38%), Positives = 119/196 (60%), Gaps = 1/196 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 365
+F+++ L E+ L + GF P+ IQ AI + G ++IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 366 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
Q++ + AL+L PTRELA Q+ + +L + H GG ++ E +R LE G
Sbjct: 107 QELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGG 166
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
++VGT GRV D I R +L + ++ F+LDEADEML+ GF + I +F + D +V++
Sbjct: 167 EIIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVEDIESIFSHANKDARVLMF 226
Query: 726 SATMPDDVLEVSRCFM 773
SATMP +L ++ FM
Sbjct: 227 SATMPRQILSIASTFM 242
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 154 bits (373), Expect = 3e-36
Identities = 85/203 (41%), Positives = 114/203 (56%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+ L E LLR + G+E PS IQ I + RDV+ QAQ+GTGKTA+F++ IL +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 548
ID QAL+LAPTRELA Q+ + ++ GG + + L GVH
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
VVVGTPGRV D + + +L + IK VLDEADEML GF D + + + Q L S
Sbjct: 129 VVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQTALFS 188
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP + ++ ++ DP I V
Sbjct: 189 ATMPSAIKRIATTYLRDPDLITV 211
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 154 bits (373), Expect = 3e-36
Identities = 81/207 (39%), Positives = 120/207 (57%), Gaps = 5/207 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
FD + L L+ G+ A P+ IQ RAI + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 372 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
+ + R C+ LILAPTREL QI + + A + + K +GG + I++ E
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAE 192
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G ++V TPGR+ D++ R+AL + + VLDEAD+ML GF + + +L A+ Q
Sbjct: 193 RGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQT 252
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SATMP + E+SR ++ DP R+ V
Sbjct: 253 MLFSATMPKQMEELSRAYLTDPARVEV 279
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 154 bits (373), Expect = 3e-36
Identities = 74/204 (36%), Positives = 117/204 (57%), Gaps = 1/204 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+ +F D+ L +++ I G+E+P+ IQQ I + G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLES 539
++ + R Q ++L P+RELA Q+ + L H GG + I+ L
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSR 122
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
GV +++GTPGRV D I R+ L + + L VLDEAD+ML GF++ I ++ + + Q +
Sbjct: 123 GVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQTV 182
Query: 720 LLSATMPDDVLEVSRCFMXDPVRI 791
+LSAT P ++L++SR F +P+ +
Sbjct: 183 ILSATFPPEILDISRRFQKNPIDV 206
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 153 bits (372), Expect = 4e-36
Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 3/205 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L ++++ + G+E P+ IQQ AI + GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 372 IDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESG 542
+D + R+ Q L+LAPTRELA Q+ + A ++ ACI GG IR L+ G
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
V VVVGT GRV D I + L + ++ VLDEADEML GF D + V +S + Q +L
Sbjct: 129 VKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSDECQRLL 188
Query: 723 LSATMPDDVLEVSRCFMXDPVRILV 797
SAT+P D+ ++ ++ +P +I V
Sbjct: 189 FSATIPTDIADIIEEYLRNPCKIQV 213
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 153 bits (371), Expect = 5e-36
Identities = 76/204 (37%), Positives = 124/204 (60%), Gaps = 1/204 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F+DM L +L + A F P+ IQ +AI ++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGV 545
+ID S+++ Q L++ PTRELA Q+ + + + A + GG ++ L+ G
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGT 128
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+VVGTPGR+ D++ + L + +K+ VLDEADEML+ GF + I + K + Q L
Sbjct: 129 AIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQRALF 188
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SATMP+ + ++++ F+ DP+ I +
Sbjct: 189 SATMPNAIRKLAKTFLKDPLNIQI 212
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 153 bits (370), Expect = 6e-36
Identities = 79/198 (39%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ + L +L + + G+E PS IQ++ I + +D+I QAQ+GTGKTA F + +L +
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 548
I+ +I Q LILAPTRELA Q+ + V + GG + +R L+ GVH
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VGTPGRV D I ++ L + +K FVLDEADEML GF D I + + + Q+ L S
Sbjct: 134 AIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQRQIALFS 193
Query: 729 ATMPDDVLEVSRCFMXDP 782
ATMP+ + ++++ F+ P
Sbjct: 194 ATMPNVIKKIAKQFLNQP 211
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 152 bits (369), Expect = 9e-36
Identities = 77/201 (38%), Positives = 125/201 (62%), Gaps = 1/201 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+D LK ELL GI+ G+E PS+IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESGVH 548
+D QA+++ PTRELA Q+ ++ I + H+ AK A GGTN+R+D+ +L+ H
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGH 202
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
VV+ TPGR+ D+I + + +++ VLDEAD++LS+ F + L + Q++L S
Sbjct: 203 VVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLLSQDFVQIMEAFILTLPKNRQILLYS 262
Query: 729 ATMPDDVLEVSRCFMXDPVRI 791
AT P V + + P I
Sbjct: 263 ATFPLSVQKFMNSHLQKPYEI 283
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 152 bits (369), Expect = 9e-36
Identities = 79/208 (37%), Positives = 122/208 (58%), Gaps = 5/208 (2%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F + L L++ + G+ KP+ IQ +AI ++G+D+ AQ+GTGKTA F++ +
Sbjct: 7 SFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIH 66
Query: 369 QIDTSI-----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 533
+ T+ R C+ LIL+PTRELA QI + HL +A GG + +R L
Sbjct: 67 YLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQMRML 126
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
+ G ++V TPGR+ D+I +RAL +++FVLDEAD+ML GF + + K+L + Q
Sbjct: 127 DRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQ 186
Query: 714 VILLSATMPDDVLEVSRCFMXDPVRILV 797
+ SATMP + E+S F+ DPV + V
Sbjct: 187 TLFFSATMPKTIQELSSQFLSDPVTVSV 214
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 152 bits (369), Expect = 9e-36
Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 2/207 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSIS 359
++ F+ + L + LL G+ GFE P+ IQQ++I ++ D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLE 536
+L ID + RE QALILAPTRELAQQI + + HL GG N+ IR +
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIR 131
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G ++V TPGR+ D++ RR + + +K VLDEADEML+ GFK+ I + +
Sbjct: 132 RGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKEDIDFILSKSDTGRNI 191
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
L SATM ++ + +M P + +
Sbjct: 192 WLFSATMAREIKRIVDTYMVQPEEVRI 218
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 152 bits (368), Expect = 1e-35
Identities = 77/202 (38%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Frame = +3
Query: 180 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 359
++E+FD + L + L+ G+ G KP+ IQ + I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQL 533
I Q+IDTS RE QA+ILAPT ELA QI K + L + ++ IG NV+ I +L
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
+ HV+VG+ GR+ ++I ++ + A+TIK V+DE D++L I DV K D Q
Sbjct: 121 KEKPHVIVGSSGRILELIKKKKISAHTIKTIVVDEGDKLLDHSNLSSIKDVIKTTMRDRQ 180
Query: 714 VILLSATMPDDVLEVSRCFMXD 779
+++ SAT+ + L V++ M D
Sbjct: 181 LMVFSATINEKTLNVAKGLMKD 202
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 152 bits (368), Expect = 1e-35
Identities = 76/198 (38%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF ++ L +++L + F + + IQ RAI ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 545
+I+ + R QA+I+APTRELA QI + G + N IGG ++R+ I++L+
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS- 120
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+VVGTPGRV D + R+ L + ++ +LDEADEML GFK++I +F+ +S DVQ+ L
Sbjct: 121 QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQIGLF 180
Query: 726 SATMPDDVLEVSRCFMXD 779
SAT V++++ +M +
Sbjct: 181 SATTSPKVMQIANDYMNE 198
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 152 bits (368), Expect = 1e-35
Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 2/204 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L L GI A G+ + +Q +++ P ++G DVIAQA +G+GKTA F + +LQ+
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLES-GV 545
+D ++ QAL+L PTRELA Q+ K + L + N K GG + + LE+
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDP 147
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
HVVVGTPGR+ ++ +RALH ++ VLDEAD ML GF++ I ++ Q +L
Sbjct: 148 HVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQSLLF 207
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SAT PD + ++R + DP+ I V
Sbjct: 208 SATFPDIIRTLAREILKDPIEITV 231
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 152 bits (368), Expect = 1e-35
Identities = 77/204 (37%), Positives = 122/204 (59%), Gaps = 2/204 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D + +L + G++ P+ IQ+ AI + GRD++ QAQ+GTGKTA F++ ++++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 372 I-DTSIRECQALILAPTRELAQQIQKVVIALG-DHLNAKCHACIGGTNVREDIRQLESGV 545
+ D + L++ PTRELA Q+ + + + N K A GGT+ R I L+ V
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
VVVGTPGR+ D I + N+I VLDEADEML+ GF + I + L + Q++L
Sbjct: 173 DVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQMVLF 232
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SATMP+++ +++ ++ DP IL+
Sbjct: 233 SATMPNEIRNIAKKYLNDPAEILI 256
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 151 bits (367), Expect = 1e-35
Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ +NL L R I G+ + IQ++AI + +D+I ++ +GTGKT F + ILQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVH 548
++T +++ QA+IL PT ELA QI + V +L I GG++++ I L +
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYALRKS-N 121
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
++VGTPGR+ D I R+ L + IK VLDEADEML GFK + VF+ Q +L S
Sbjct: 122 IIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLLFS 181
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATMP VLE++ + +PV I+V
Sbjct: 182 ATMPKQVLEIANNYQTNPVEIVV 204
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 151 bits (366), Expect = 2e-35
Identities = 82/227 (36%), Positives = 129/227 (56%)
Frame = +3
Query: 117 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 296
Q S + P L + Q + FD LK+ +L+GI GF PS +Q ++I +Q
Sbjct: 22 QQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQ 81
Query: 297 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 476
G+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTRELA QI + ++ LG
Sbjct: 82 GKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLGRFGR 140
Query: 477 AKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 656
K GG +++ LE ++ TPGR+ D + + + ++ VLDE+DEML
Sbjct: 141 IKTICMYGGQSIKRQCDLLEKKPKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLD 200
Query: 657 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
GF D I ++FK L Q +L SATMP+ + ++ + +P + +
Sbjct: 201 MGFLDDIEEIFKFLPNTRQTLLFSATMPEPIKALAMKILNEPAFVKI 247
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 151 bits (366), Expect = 2e-35
Identities = 79/202 (39%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
+ DM L E+ + A + +PS IQ I ++GRDV+ QA++GTGKTA F I I+++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 372 ID--TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
++ + R QALIL PTRELA Q++ + L A GG +R + +L+
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAP 125
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
H+VVGTPGRV D++TRRAL ++ VLDEAD ML GF+ I + + + Q +LL
Sbjct: 126 HIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLL 185
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT+P + ++++ +M +P ++
Sbjct: 186 SATVPPTIEKLAQRYMRNPEKV 207
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 151 bits (365), Expect = 3e-35
Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 7/233 (3%)
Frame = +3
Query: 120 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 287
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ A+ P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
Query: 288 CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIA 458
++G+D++ A +GTGKTA FS+ +LQ+I AL+L PTRELA Q+ + +
Sbjct: 70 LLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHR 129
Query: 459 LGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 638
G L GG + + +R L+ GV VVV TPGR D + R+ L +++ VLDE
Sbjct: 130 YGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGRALDHLQRKTLKLEQVRVVVLDE 189
Query: 639 ADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
ADEML GF + + + Q L SAT+P + ++ + +PVR+ +
Sbjct: 190 ADEMLDMGFAEDLEAILSSTPEKRQTALFSATLPPRIASIAERHLREPVRVRI 242
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 151 bits (365), Expect = 3e-35
Identities = 87/213 (40%), Positives = 118/213 (55%), Gaps = 1/213 (0%)
Frame = +3
Query: 162 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 341
+ D D V TF + L EE+L + GF P+ IQ AI P ++ RDV+ AQ+GTGKT
Sbjct: 39 EEDTDTV--TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 342 ATFSISILQQIDTSIRECQALILAPTRELA-QQIQKVVIALGDHLNAKCHACIGGTNVRE 518
A F + +L +D R QAL+LAPTRELA Q Q + GG+
Sbjct: 97 AAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGP 156
Query: 519 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
I L+ G VVVGTPGRV D+I + AL + +++ VLDEADEML GF + + +
Sbjct: 157 QIGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETIASSA 216
Query: 699 SADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
D L SATMP + +V+R + DPV++ V
Sbjct: 217 PDDRLTALFSATMPAAIEKVAREHLKDPVKVAV 249
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 150 bits (364), Expect = 3e-35
Identities = 73/197 (37%), Positives = 121/197 (61%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F ++NL ++R ++ GFE+ + IQ++AI ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
I + + Q L++ PTRELA Q+ + + +G + A GG + R ++ LE H+
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPHI 123
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
VVGTPGR+ + + R + + I++ VLDEAD+ML GF D+ + K L Q +L SA
Sbjct: 124 VVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLLFSA 183
Query: 732 TMPDDVLEVSRCFMXDP 782
T+ V ++R ++ DP
Sbjct: 184 TLSPPVQMLARKYLKDP 200
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 150 bits (363), Expect = 5e-35
Identities = 75/207 (36%), Positives = 125/207 (60%), Gaps = 5/207 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISI 362
F D+ L + +L+ + G+ P+ IQ++AI P ++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 363 LQQIDTSI--RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
L++ D I + C+ L+LAPTREL QI G K + +GGT+V +D +L
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G +++ TPGR+ D+I ++A + ++++ VLDEAD+ML GF + + +++ + Q
Sbjct: 124 RGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQT 183
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+ SATMP + E+ + +PV++ V
Sbjct: 184 LFFSATMPKAIKELVSGYCNNPVQVSV 210
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 150 bits (363), Expect = 5e-35
Identities = 87/206 (42%), Positives = 119/206 (57%), Gaps = 4/206 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D LK ELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVR--EDIRQLESG 542
I+ S + AL+L TRELA QI + +L + K GG N++ +D+ + E
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNEC- 166
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVI 719
H+VVGTPGRV + + L ++ F+LDE D+ML S + + ++FKM D QV+
Sbjct: 167 PHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVM 226
Query: 720 LLSATMPDDVLEVSRCFMXDPVRILV 797
+ SAT+ ++ V + FM DP+ I V
Sbjct: 227 MFSATLSKEIRPVCKKFMQDPMEIYV 252
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 149 bits (362), Expect = 6e-35
Identities = 81/209 (38%), Positives = 123/209 (58%), Gaps = 6/209 (2%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+FD + L ++LR + G+ +P+ IQQ+AI ++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 369 QIDT------SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 530
+ T R +ALIL PTRELA QI + V +LN + GG ++ + +
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 531 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
L GV V+V TPGR+ D+ + A+ + +++ VLDEAD ML GF I V L A
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q +L SAT DD+ ++ + +P+ I V
Sbjct: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEV 210
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 149 bits (361), Expect = 8e-35
Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 2/199 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 548
+ Q LILAPTRE+A QI V+ A+G + +CH IGGT + +D +L+ H
Sbjct: 125 LILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CH 183
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILL 725
+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI+ ++ L A Q++ +
Sbjct: 184 IAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAV 243
Query: 726 SATMPDDVLEVSRCFMXDP 782
SAT P+ + +M DP
Sbjct: 244 SATYPEVLANALTRYMRDP 262
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 149 bits (361), Expect = 8e-35
Identities = 79/205 (38%), Positives = 124/205 (60%), Gaps = 2/205 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF+++NL E +L+ + G+ P+ IQ+++I +QG+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 369 QI-DTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
++ T R+ +AL+L PTRELA QI + A G + K GG + L SG
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
+ ++V TPGR+ D+I++ + +++ FVLDEAD ML GF I + K+L A Q +
Sbjct: 122 IQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLF 181
Query: 723 LSATMPDDVLEVSRCFMXDPVRILV 797
SATMP ++ ++ + P ++ V
Sbjct: 182 FSATMPPEIETLANSMLTKPEKVEV 206
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 149 bits (361), Expect = 8e-35
Identities = 74/202 (36%), Positives = 118/202 (58%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + + EE+ + +P+ +Q +AI P + RDV+AQAQ+GTGKT F + IL++
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
++ QALI+ PTRELA QI L + A GG +V + +R+L+ +H+
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHI 124
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
++GTPGR+ D + R+ ++ + + VLDEAD+ML GF + D+ + Q + SA
Sbjct: 125 IIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNMFFSA 184
Query: 732 TMPDDVLEVSRCFMXDPVRILV 797
TMP+ V ++ +M DPV+I V
Sbjct: 185 TMPNQVRTLAEQYMKDPVQIQV 206
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 149 bits (361), Expect = 8e-35
Identities = 73/194 (37%), Positives = 117/194 (60%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F++ NL+ EL+ I G+ +P+ +Q AI + G D++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
+ +ALIL PTRELA Q+ KV ALG + GG ++ + I + G ++
Sbjct: 64 TAKE-KGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
+VGTPGR D+I R L+ + + FVLDEADEML GF + I + +L + Q L SA
Sbjct: 123 IVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLFSA 182
Query: 732 TMPDDVLEVSRCFM 773
T+P +++E+++ FM
Sbjct: 183 TIPSEIIELAKGFM 196
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 149 bits (361), Expect = 8e-35
Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 2/199 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 548
+ Q LILAPTRE+A QI V+ A+G + +CH IGGT + +D +L+ H
Sbjct: 124 LVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CH 182
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILL 725
+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI+ ++ L A Q++ +
Sbjct: 183 IAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAV 242
Query: 726 SATMPDDVLEVSRCFMXDP 782
SAT P+ + +M DP
Sbjct: 243 SATYPEFLANALTKYMRDP 261
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 149 bits (360), Expect = 1e-34
Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 1/200 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF M L +++L G+ GF KPS IQ ++I G D+I +A+SGTGKTA F I L+
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALE 84
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGV 545
ID I Q +ILAPTRE+A QI++V+ +LG + K + IGG + D ++L S
Sbjct: 85 MIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAMDIDRKKL-SNC 143
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
H+ +G PGRV +I + L + ++LFVLDEAD+++ F+ I+ ++ L + QVI
Sbjct: 144 HIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEESFQKDINYIYAKLPPNRQVISS 203
Query: 726 SATMPDDVLEVSRCFMXDPV 785
SAT P D+ +M P+
Sbjct: 204 SATYPGDLEIFLESYMQSPI 223
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 149 bits (360), Expect = 1e-34
Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 5/207 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L E+++ + G+ P+ IQ +AI + +D++ AQ+GTGKTA F++ ++QQ
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 372 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
I R +A+IL+PTRELA QI + ++ G L IGG +R+ +R L
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GV ++V TPGR+ D++ ++ L + K VLDEAD+ML GF + + ++ D Q
Sbjct: 225 KGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQT 284
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SATM ++ +++ ++ DPV++ V
Sbjct: 285 LLFSATMSKEIKKLTETYLTDPVQVSV 311
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 149 bits (360), Expect = 1e-34
Identities = 72/201 (35%), Positives = 119/201 (59%), Gaps = 1/201 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L E+L++ + + G+E+ + IQ+ ++ + G+D+IAQA++GTGKTA F + +L +
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 548
+ Q LIL PTREL +Q+ K + L + N K + GG R ++ + G H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VVGTPGR+ + + +L + ++ VLDEAD ML GF+D+I + + Q +L S
Sbjct: 126 IVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTLLFS 185
Query: 729 ATMPDDVLEVSRCFMXDPVRI 791
AT P + +++ M DP+RI
Sbjct: 186 ATYPKKIATIAKRVMKDPLRI 206
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 149 bits (360), Expect = 1e-34
Identities = 81/211 (38%), Positives = 129/211 (61%), Gaps = 6/211 (2%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+E+F+DM L +++ I + + +PS+IQ +A+ + GRD++ A++G+GKTA F+I +
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 176
Query: 363 LQQ--IDTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDI 524
LQ + IR AL+LAPTRELAQQI+K V A L + K +GGTN+ +
Sbjct: 177 LQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQR 236
Query: 525 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 704
+L +GV + V TPGR D + + + I VLDEAD ML GF+ QI ++ + L
Sbjct: 237 SELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPE 296
Query: 705 DVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q +L SATMP ++ +++ ++ +PV++ V
Sbjct: 297 KHQTLLFSATMPVEIEALAKEYLANPVQVKV 327
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 148 bits (359), Expect = 1e-34
Identities = 74/207 (35%), Positives = 124/207 (59%), Gaps = 2/207 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 359
++TF+++ + E+ + I G+E P +Q+ I + + DV+A AQ+GTGKTA F +
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP 60
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLE 536
+LQQID R Q+LIL PTREL QI + +++ K GG+++ IR L+
Sbjct: 61 LLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLK 120
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GVH++V TPGR+ D++ R+ + +T+ V+DEADEML+ GF D I+ + + +
Sbjct: 121 RGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVPKERNT 180
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SATM ++ +S+ ++ + I +
Sbjct: 181 LLFSATMSPEIARISKNYLQNAKEITI 207
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 148 bits (359), Expect = 1e-34
Identities = 80/202 (39%), Positives = 114/202 (56%), Gaps = 1/202 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF D+ + +LR I G+E P+AIQ I + G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESGV 545
+ID + + QAL+L PTRELA Q+ + G +L+ GG++ + L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
VVVGTPGR+ D + R L + + VLDEADEML+ GF D + + QV L
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SATMP + ++S ++ DP +
Sbjct: 194 SATMPPAIRKLSAKYLHDPFEV 215
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 148 bits (358), Expect = 2e-34
Identities = 73/202 (36%), Positives = 117/202 (57%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 365
++F + L +E+ R + G+E P+ +Q I +Q +D++ ++Q+G+GKTA+F I +
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 366 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ ++ + QAL+L PTRELA Q+++ + +G K A G + +L+
Sbjct: 64 EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKT 123
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
H+VVGTPGRV D I + L +K V+DEADEML+ GF DQ+ + L +L
Sbjct: 124 HIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLF 183
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT+P+DV +SR +M P I
Sbjct: 184 SATLPEDVERLSRTYMNAPTHI 205
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 148 bits (358), Expect = 2e-34
Identities = 75/201 (37%), Positives = 114/201 (56%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF+++ + +L+ I GF+ P+ +Q +AI + D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
+ Q LIL P RELA Q+ + + +L K A G N+ + + L GV
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVS 123
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+V GTPGRV+D I+ L I+ VLDEAD ML GF DQ+ + K L + +L S
Sbjct: 124 IVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKERITLLFS 183
Query: 729 ATMPDDVLEVSRCFMXDPVRI 791
ATMP ++ + + +M +PV I
Sbjct: 184 ATMPPEIHNICKRYMNNPVTI 204
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 147 bits (357), Expect = 2e-34
Identities = 74/208 (35%), Positives = 124/208 (59%), Gaps = 3/208 (1%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKTATFSI 356
++TF + + ++++G+ GF + +Q++ I+P + R D++ AQ+GTGKTA F I
Sbjct: 1 MKTFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGI 59
Query: 357 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQL 533
++Q DT ++ QAL+L PTREL Q+ + +G ++ K GG ++ +L
Sbjct: 60 PLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEEL 119
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
G VVV TPGR++D+I R A+ + + VLDEADEML GF+D+++ + +
Sbjct: 120 RKGAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQDELNAILAVTPDSKN 179
Query: 714 VILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SATMP +V ++ +M DP+ I+V
Sbjct: 180 TLLFSATMPREVAAIAANYMKDPLEIIV 207
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 147 bits (357), Expect = 2e-34
Identities = 72/197 (36%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 365
TF D+ L LL+ + PS IQQ+AI + ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 366 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESG 542
QQI+ S+++ Q L+L PTREL QQ+ K + ++ A GG + E I++LE+
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP 121
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
H++V TPGR+ D+I R+A++ + +K +LDEADEML+ GF I + K+ + +L
Sbjct: 122 KHILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLNMGFLPDIDKIMKIAKPTARKLL 181
Query: 723 LSATMPDDVLEVSRCFM 773
++T+ ++ + R ++
Sbjct: 182 FTSTLGSELKLIIREYL 198
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 147 bits (357), Expect = 2e-34
Identities = 75/197 (38%), Positives = 114/197 (57%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + ++ ++ R + GFE + IQ + + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
++ R QALI+ PTREL Q+ + + +G ++ K A GG ++ I QL GVHV
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHV 124
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
+V TPGR+ D I R + I VLDEADEML+ GF D I + + Q +L SA
Sbjct: 125 IVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTMLFSA 184
Query: 732 TMPDDVLEVSRCFMXDP 782
T+ +L ++R +M +P
Sbjct: 185 TVSKPILRIARKYMRNP 201
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 147 bits (357), Expect = 2e-34
Identities = 80/205 (39%), Positives = 118/205 (57%), Gaps = 3/205 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 545
++ + L++ TRELA QI K ++ N K GG ++++D L+
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVIL 722
H+VVGTPGR+ + ++L+ IK F+LDE D+ML + + + ++F+M + QV++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226
Query: 723 LSATMPDDVLEVSRCFMXDPVRILV 797
SAT+ ++ V R FM DP+ I V
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFV 251
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 147 bits (356), Expect = 3e-34
Identities = 77/204 (37%), Positives = 121/204 (59%), Gaps = 1/204 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F+ N ++ G+ A G+++P+ IQ +AI P + G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 369 QIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
++ ++ R + L++APTRELA QI +LG + + GG N+ + IR+L SGV
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
VVV PGR+ D I R + ++ ++DEAD M GF+ I + K L Q +L
Sbjct: 122 DVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SATMP +V +++ +PV + V
Sbjct: 182 SATMPPEVRKLTLETQTNPVTVQV 205
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 147 bits (356), Expect = 3e-34
Identities = 75/201 (37%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 359
+ TF + ++++ ++ I G KP+ IQ++AI ++ D I AQ+GTGKTA F +
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLP 60
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC--HACIGGTNVREDIRQL 533
+L ID + QALIL+PTREL QQI+K + +++ + A GG + + L
Sbjct: 61 VLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNL 120
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS-ADV 710
+ H+V+ TPGR+ D+I R A+ + +K +LDEADEMLS GFK ++ + K + +D
Sbjct: 121 KRTTHIVIATPGRLIDLIERGAVDISHVKTVILDEADEMLSMGFKQDLNRILKFTTKSDR 180
Query: 711 QVILLSATMPDDVLEVSRCFM 773
+ L SATMPD++ + + +M
Sbjct: 181 KTWLFSATMPDEIKRIVKTYM 201
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 147 bits (356), Expect = 3e-34
Identities = 80/202 (39%), Positives = 124/202 (61%), Gaps = 5/202 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L + +L G+ A GF++PS IQ +AI G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 548
+ Q L+LAPTRE+A QI VV+A+G + +CH IGG + +D + L+ H
Sbjct: 88 LILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKK-CH 146
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML----SRGFKDQIHDVFKMLSADVQV 716
+ +G+PGR+ +I AL ++I+LFVLDEAD++L S F++QI+ ++ L A+ Q+
Sbjct: 147 IAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQM 206
Query: 717 ILLSATMPDDVLEVSRCFMXDP 782
+ LSAT P+ + + +M +P
Sbjct: 207 LALSATYPESLAQQLSRYMREP 228
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 147 bits (355), Expect = 4e-34
Identities = 74/195 (37%), Positives = 114/195 (58%), Gaps = 1/195 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQ 368
F M L + +L I G+E P+ IQ++ I + G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
++D + QAL+L PTRELA Q+ + +L + GG ++ IR L+ V
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VVGTPGR+ D + R L IK V+DEADEML GF + + + + + Q+++ S
Sbjct: 124 LVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQILMFS 183
Query: 729 ATMPDDVLEVSRCFM 773
ATMP ++ ++R M
Sbjct: 184 ATMPQRIVTLARKHM 198
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 147 bits (355), Expect = 4e-34
Identities = 65/108 (60%), Positives = 88/108 (81%)
Frame = +3
Query: 165 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTA 344
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P IQG DVIAQAQSGTGKT+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 345 TFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 488
F++++ Q +DTS RE QALI +PTRELA Q +KV++A+GD +N + H
Sbjct: 329 MFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 147 bits (355), Expect = 4e-34
Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 4/240 (1%)
Frame = +3
Query: 90 DSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET-FDDMNLKEELLRGIYAYGFEKPSAI 266
D + P Q S PP D + + + + F D LK ELLR I GFE PS +
Sbjct: 14 DEEEEPQAPQESTPAPPKKD---IKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 70
Query: 267 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 446
Q I I G DV+ QA+SG GKTA F ++ LQQI+ + L++ TRELA QI K
Sbjct: 71 QHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISK 130
Query: 447 VVIALGDHL-NAKCHACIGGTNVREDIRQLESGV-HVVVGTPGRVYDMITRRALHANTIK 620
++ + K GG ++++D L+ HVVVGTPGR+ ++ R+ +K
Sbjct: 131 EYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVK 190
Query: 621 LFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
FVLDE D+ML + + + ++F++ + Q ++ SAT+ D+ V R FM DP+ + V
Sbjct: 191 HFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFV 250
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 146 bits (354), Expect = 6e-34
Identities = 65/197 (32%), Positives = 121/197 (61%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF+ L E++L+ + + G+ PS +Q+ I ++G++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
I+ QALI+ PTRELA Q++ + +G +C A G ++++ I +L+ VH
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VV TPGR+ D I R ++ +K V+DEAD+M ++GF +Q+ + L + V L S
Sbjct: 124 IVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEKIVSLFS 183
Query: 729 ATMPDDVLEVSRCFMXD 779
AT+ +++ + +M D
Sbjct: 184 ATIDEEIKYICEKYMLD 200
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 146 bits (354), Expect = 6e-34
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F ++ L +L + F +P+ IQ AI P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 372 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ T R+ +ALIL PTRELA QI + ++ + + +GG N R +R + G
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
++VV TPGR+YD ++R ++ T+++ +LDE+D ML GF I + + A+ Q +L
Sbjct: 124 NIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLF 183
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT+ V ++ + + VRI
Sbjct: 184 SATLESSVKQLVETHVRNAVRI 205
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 146 bits (354), Expect = 6e-34
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
VET +++ + + + + G + S IQ +++ +QG+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 363 LQQIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
L++I+ + QA++L PTRELA+Q+ Q+ A D N K GG + I+ L+
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKH 122
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
H++VGTPGRV D + +R + +KL VLDEAD ML GF+D + +F VQ +
Sbjct: 123 SPHIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTL 182
Query: 720 LLSATMPDDVLEVSRCFMXDPV 785
L SAT + + V++ ++ +PV
Sbjct: 183 LFSATFTEQIERVAKQYLHNPV 204
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 146 bits (353), Expect = 7e-34
Identities = 77/208 (37%), Positives = 122/208 (58%), Gaps = 5/208 (2%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F + L + LLR + ++ P+ +Q +AI + G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 369 QI-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 533
++ S + L+L PTRELA+Q+ + IA G L+ + A GG ++ + +L
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
GV V+V TPGR+ D+ + A+ + ++ VLDEAD ML GF +++ VF L A Q
Sbjct: 122 RKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQ 181
Query: 714 VILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SAT DD+ ++ + PV I V
Sbjct: 182 TLLFSATFSDDIRAMAATILRGPVNISV 209
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 146 bits (353), Expect = 7e-34
Identities = 73/200 (36%), Positives = 115/200 (57%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+ LK+ +L IY G++KP+ IQ +++ +QG+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
+ ++ Q LIL P REL +QI + I LG L A + G +++ G V
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLSGVKKSLHGAQV 126
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
+ TPGR+ D+ + L++N I + V+DEAD + GF++ + + K L VQ +L SA
Sbjct: 127 ISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLPKSVQTVLCSA 186
Query: 732 TMPDDVLEVSRCFMXDPVRI 791
T DD+ S+ + PV I
Sbjct: 187 TFTDDIKNFSKTLLKKPVII 206
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 145 bits (352), Expect = 1e-33
Identities = 77/217 (35%), Positives = 116/217 (53%), Gaps = 5/217 (2%)
Frame = +3
Query: 162 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 341
D + ++ +F D L E + R + + P+ IQ + I + GRDV+ AQ+GTGKT
Sbjct: 8 DMERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKT 67
Query: 342 ATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 506
A+F++ IL + I + + L+L+PTREL+ QI A G H+ IGG
Sbjct: 68 ASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGV 127
Query: 507 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 686
+ +R L GV V+V TPGR+ D++ L +++ VLDEAD ML GF + I +
Sbjct: 128 PMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKI 187
Query: 687 FKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
L Q + SATMP D+ E++ + DP R+ V
Sbjct: 188 VAKLPIKRQTLFFSATMPKDIAELADSMLRDPARVAV 224
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 145 bits (352), Expect = 1e-33
Identities = 78/203 (38%), Positives = 114/203 (56%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + + +L I A G+E+PS IQ +AI + G D+I QAQ+GTGKTA F++ +L +
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 548
ID + RE Q LILAPTRELA Q+ L A GG + ++ L G
Sbjct: 85 IDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQ 144
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
++V TPGR+ D + R +T+K VLDEADEML GF + + +F L Q +L S
Sbjct: 145 ILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTVLFS 204
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
AT+P + E++ + +P + +
Sbjct: 205 ATLPHSIREIAEKHLHEPQHVKI 227
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 145 bits (352), Expect = 1e-33
Identities = 73/197 (37%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 368
F+++NL + +L I GFEKP+ IQ + I + +++AQA++G+GKTA+F+I +++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 67
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
++ + +A+IL PTRELA Q+ + +L + N K GG + I+ L++ +
Sbjct: 68 LVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALKNA-N 125
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+VVGTPGR+ D I R L+ +K F+LDEADEML+ GF + + + D +++L S
Sbjct: 126 IVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFS 185
Query: 729 ATMPDDVLEVSRCFMXD 779
ATMP ++L +++ +M D
Sbjct: 186 ATMPREILNLAKKYMGD 202
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 145 bits (352), Expect = 1e-33
Identities = 71/202 (35%), Positives = 121/202 (59%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
+ + QALIL PTRELA Q+++ + +G K A G ++ + +L+ H+
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHI 123
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
VVGTPGRV D I + L + + V+DEADEML+ GF +Q+ + K L + +L SA
Sbjct: 124 VVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSA 183
Query: 732 TMPDDVLEVSRCFMXDPVRILV 797
T+P D+ ++SR +M +P I V
Sbjct: 184 TLPQDIEKLSRQYMQNPEHIEV 205
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 145 bits (351), Expect = 1e-33
Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 4/206 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D LK E+LR I GFE PS +Q I + G D++ QA+SG GKTA F ++ LQQ
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 372 IDTSIRE-CQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 545
++ S C L++ TRELA QI K ++ K GG +++D L+SG
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGT 162
Query: 546 -HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVI 719
H+VVGTPGR+ +I + L+ +K FVLDE D+ML + + + ++F+ QV+
Sbjct: 163 PHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVM 222
Query: 720 LLSATMPDDVLEVSRCFMXDPVRILV 797
+ SAT+ D+ V + FM DP+ + V
Sbjct: 223 MFSATLSKDIRPVCKKFMQDPMEVYV 248
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 144 bits (350), Expect = 2e-33
Identities = 77/209 (36%), Positives = 123/209 (58%), Gaps = 8/209 (3%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF + L E+L + G+ P+ IQ + I + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 369 QI----DTSIRECQ----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 524
++ +TS+ + ALI+APTRELA QI + V G +L + GG N+ I
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
Query: 525 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 704
L++GV ++V TPGR+ D++ ++A++ + ++ VLDEAD ML GF I V +LS
Sbjct: 126 AALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSP 185
Query: 705 DVQVILLSATMPDDVLEVSRCFMXDPVRI 791
Q ++ SAT ++ +++ + PVRI
Sbjct: 186 QRQSLMFSATFSGEIRKLADSLLKQPVRI 214
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 144 bits (350), Expect = 2e-33
Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 1/213 (0%)
Frame = +3
Query: 162 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 341
D D D TF+D+ + EL R G+++P+ IQ AI + G+D+I A++G+GKT
Sbjct: 33 DDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKT 92
Query: 342 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 521
A F+I ILQ++ + +LILAPTREL+ QI++ +I+LG + +GG ++
Sbjct: 93 AAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQ 152
Query: 522 IRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
QL H++VG+PGR+ D + + TIK VLDEAD++LS F D ++ + L
Sbjct: 153 ALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKIITSL 212
Query: 699 SADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
D L SATM + ++ + + P++I V
Sbjct: 213 PKDKVTYLYSATMTSKITKLQKVTLMKPIQINV 245
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 144 bits (349), Expect = 2e-33
Identities = 79/213 (37%), Positives = 128/213 (60%), Gaps = 1/213 (0%)
Frame = +3
Query: 156 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTG 335
T D D+ + +F + L +++ +G+ GF+KPS IQ +AI G D+I +++SGTG
Sbjct: 15 TKDVILDENI-SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTG 73
Query: 336 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNV 512
KT FS L+ ++T+ Q LIL PTRE+A QI+ V+ ++G H+N K + IGG +
Sbjct: 74 KTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPL 133
Query: 513 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 692
+D+++ S H+ VG PGRV ++ AL N +KLFVLDEAD+++ F+ I++++
Sbjct: 134 EDDLKK-SSKCHIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEESFQSDINEIYN 192
Query: 693 MLSADVQVILLSATMPDDVLEVSRCFMXDPVRI 791
L Q+I+ SAT P ++ +M P +
Sbjct: 193 SLPPRKQMIVSSATYPQELDTFLANYMQSPTHV 225
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 144 bits (349), Expect = 2e-33
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Frame = +3
Query: 162 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 341
D + Q + TF+DM L + L + + A F P+ +Q++AI P + GRD++A AQ+GTGKT
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 342 ATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 518
F I L+ + DT Q LIL PTRELA Q+ V L +GGT+ R
Sbjct: 79 LAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERN 138
Query: 519 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
I+ + SG VVV TPGR+ D + RR + + +++ VLDEAD M+ GF I + + L
Sbjct: 139 QIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILRAL 198
Query: 699 SADVQVILLSATMPDDVLEVSRCFMXDPVRI 791
D Q + SATM V + + + + VR+
Sbjct: 199 PRDKQTLCFSATMGPAVSGIVQDCLYNAVRV 229
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 144 bits (349), Expect = 2e-33
Identities = 75/207 (36%), Positives = 121/207 (58%), Gaps = 4/207 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 369 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
+ + + +AL+L PTRELA Q+ + V G +L + GG + I++L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GV V+V TPGR+ D+ ++A+ N +++ VLDEAD ML GF I + ML A Q
Sbjct: 122 HGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQN 181
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
++ SAT D++ E+++ + PV I V
Sbjct: 182 LMFSATFSDEIRELAKGLVNQPVEISV 208
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 144 bits (348), Expect = 3e-33
Identities = 83/246 (33%), Positives = 130/246 (52%), Gaps = 10/246 (4%)
Frame = +3
Query: 84 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 263
P+ + N ++ DGP + TL V +F D+ ++E++ + + G P
Sbjct: 19 PDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGVREDICQALEGVGIVSPFP 78
Query: 264 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID----------TSIRECQALILA 413
IQ +I ++G D+I QA++GTGKT F I+IL +I T+ + QAL++
Sbjct: 79 IQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMC 138
Query: 414 PTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITR 593
PTRELA Q+ K + A+ GG I L++GV VVVGTPGR+ D+ R
Sbjct: 139 PTRELALQVSKDISTAASVRGARVLTVYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQR 198
Query: 594 RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 773
+ L + +++ VLDEADEML GF + ++ A Q +L SATMP ++ ++R +
Sbjct: 199 KDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTMLFSATMPAPIMALARSQL 258
Query: 774 XDPVRI 791
PV +
Sbjct: 259 HRPVHV 264
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 144 bits (348), Expect = 3e-33
Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 4/212 (1%)
Frame = +3
Query: 174 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 353
D ET+D+M L E + + A G+ P+ +Q R IQG DV+ Q+Q+G+GKT F
Sbjct: 152 DPAPETWDEMALPEHVRNAVDAAGWTAPTKVQARTYETMIQGTDVLVQSQTGSGKTGAFC 211
Query: 354 ISIL----QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 521
+ L Q D + Q ++L PTRELA+Q+ ++ L GGT +
Sbjct: 212 LPWLANRFQPGDAAETGVQLIVLLPTRELAKQVCNELVRLAIETPVDVLPVYGGTAMNPQ 271
Query: 522 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 701
+ L GVH VVGTPGRV D I R++L + ++ VLDE DEMLS GF + I + +
Sbjct: 272 LDALARGVHAVVGTPGRVLDHIRRKSLDLSKVRTVVLDECDEMLSMGFLEDIRAILRACP 331
Query: 702 ADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ Q L SAT+P D+ ++R M +P I++
Sbjct: 332 KERQTCLFSATVPRDIARIARRDMREPEHIVL 363
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 144 bits (348), Expect = 3e-33
Identities = 75/204 (36%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+FD ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 369 QIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
++ R +A+I+ PTRELA+QIQ V+ ALG + + GG + I++L GV
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+ V PGR+ D + R L + + +LDEAD+M GF + + ++ A Q +L
Sbjct: 122 EIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTMLF 181
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SATMPD + ++R + +P I +
Sbjct: 182 SATMPDAIRALAREALREPQTIQI 205
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 144 bits (348), Expect = 3e-33
Identities = 80/215 (37%), Positives = 114/215 (53%), Gaps = 5/215 (2%)
Frame = +3
Query: 168 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 347
D V+ F + L E LLR I +E P+ IQ R+I ++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 348 FSISILQQIDTSI-----RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 512
F + IL +I + R C+AL+LAPTRELA QI G IGG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKP 170
Query: 513 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 692
R++ESGV ++V TPGR+ D + + + ++ VLDEAD+ML GF I +
Sbjct: 171 GPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMA 230
Query: 693 MLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
L Q ++ SATMP + ++ F+ DP + V
Sbjct: 231 KLPRQRQAVMFSATMPKPIRALAGEFLRDPREVAV 265
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 143 bits (347), Expect = 4e-33
Identities = 79/225 (35%), Positives = 128/225 (56%), Gaps = 6/225 (2%)
Frame = +3
Query: 141 GMDPGTLDTDWDQVVE--TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIA 314
G + G D Q E +F DMNL LL+ I A GF++P+ IQ+ I + G+D+ A
Sbjct: 201 GQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICA 260
Query: 315 QAQSGTGKTATFSISILQQIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKC 485
A +GTGKTA F++ +L+++ R+ + L+L PTREL Q+ V L N
Sbjct: 261 CAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITT 320
Query: 486 HACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRG 662
+GG +V+ L + +++ TPGR+ D + + H ++I++ +LDEAD ML
Sbjct: 321 CLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEY 380
Query: 663 FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
F++Q+ ++ +M S Q +L SATM D+V +++ + +PVRI V
Sbjct: 381 FEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFV 425
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 142 bits (345), Expect = 7e-33
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 6/212 (2%)
Frame = +3
Query: 180 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 359
+ TF ++ L L + GF P+ IQQ+AI +QGRDV+A AQ+GTGKTA + +
Sbjct: 1 MTNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLP 60
Query: 360 ILQQIDTSIRE------CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 521
++Q + RE +ALILAPTRELAQQ+ + H GGT++R
Sbjct: 61 LIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQ 120
Query: 522 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 701
QL GV +++ TPGR+ D + + N +++ VLDEAD ML GF I + K +
Sbjct: 121 QEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMP 180
Query: 702 ADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ Q +L SAT V ++ M +PV + V
Sbjct: 181 EERQTLLFSATFETRVKALAYRLMKEPVEVQV 212
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 142 bits (345), Expect = 7e-33
Identities = 73/207 (35%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 369 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
+ + + +AL+L PTRELA Q+ + V G +L + GG + I++L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GV V+V TPGR+ D++ + + N +++ VLDEAD ML GF I + +L A Q
Sbjct: 122 HGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
++ SAT D++ E+++ + PV I V
Sbjct: 182 LMFSATFSDEIRELAKGLVNQPVEISV 208
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 142 bits (345), Expect = 7e-33
Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 5/207 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D +L +L + ++ P+ IQQ AI +QG+D++A A++GTGKTA F++ IL++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 372 IDTSIR-----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
+ + R + + L+L PTRELA Q+ + + + L K GG + I+ L+
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQALK 122
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
SG+ +VV TPGR+ D+ + AL I V DEAD M GF I + KML Q
Sbjct: 123 SGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQN 182
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SAT P +V+ + + DP+RI +
Sbjct: 183 LLFSATYPSEVMSLCNSMLKDPLRIQI 209
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 142 bits (345), Expect = 7e-33
Identities = 80/210 (38%), Positives = 134/210 (63%), Gaps = 5/210 (2%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 356
V++F ++NL E+L++GI A GF+KPS IQ++A+ + R++I Q+QSGTGKTA F++
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206
Query: 357 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
++L ++D +I QA+ +AP+RELA+QIQ+V+ +G I G+ R +++
Sbjct: 207 NMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGSWSRNS--RID 264
Query: 537 SGVHVVVGTPGRVYDMITR--RALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSAD 707
+++GTPG + DM+ R R L I++ VLDEADE+++ +G +Q + ++L +
Sbjct: 265 K--QILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLLPPN 322
Query: 708 VQVILLSATMPDDVLEVSRCFMXDPVRILV 797
VQ +L SAT DDV E + F + +I +
Sbjct: 323 VQNVLFSATFNDDVQEFADRFAPEANKIFL 352
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 142 bits (344), Expect = 9e-33
Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 3/213 (1%)
Frame = +3
Query: 168 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 347
DW + TF D++L ++ + I G+E P+ IQ AI P + GRDV+ AQ+GTGKTA+
Sbjct: 6 DWTPMT-TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTAS 64
Query: 348 FS---ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 518
F+ I++L + R ++L+L PTRELA Q+ + H+ IGG + +E
Sbjct: 65 FTLPMITMLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKE 124
Query: 519 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
+ ++ GV V++ TPGR+ D R L N +K+ V+DEAD ML GF I +F ++
Sbjct: 125 QEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLV 184
Query: 699 SADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q + SATM ++ ++ F+ +P +I V
Sbjct: 185 PFTRQTLFFSATMAPEIERITNTFLSNPEKIEV 217
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 142 bits (344), Expect = 9e-33
Identities = 75/207 (36%), Positives = 128/207 (61%), Gaps = 6/207 (2%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F + L +L+ + + P IQ++AI ++G+D++ AQ+G+GKTA+F + ILQ
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 369 QIDTSI----RECQALILAPTRELAQQIQKVVIALGDHL--NAKCHACIGGTNVREDIRQ 530
+ T R AL+L PTRELA Q+ +V A + L K A GG ++ + Q
Sbjct: 70 MLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQ 129
Query: 531 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
L+ GV +++ TPGR+ D++ +A++ + +++ VLDEAD+ML+ GFK+++ ++FK+L
Sbjct: 130 LQ-GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKR 188
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRI 791
Q +L SAT+ DV ++ + DPV+I
Sbjct: 189 QNLLFSATLGKDVDTITEFLLHDPVKI 215
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 142 bits (343), Expect = 1e-32
Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 4/207 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F+D +LK++LLR + GFE+PS +Q + I I G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GV 545
Q+ + L+L TRELA QI+ LG N K A GG DI L++
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKKP 158
Query: 546 HVVVGTPGRVYDMITRR--ALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQV 716
H++V TPGR +I + + I+ F++DE D +LS + + ++F L QV
Sbjct: 159 HILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVLSSNKMRSDVQNIFYELPRKKQV 218
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
++ S TM D+ + R F+ D + I V
Sbjct: 219 MMFSGTMSDESKKTCRKFLQDQIEIFV 245
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 142 bits (343), Expect = 1e-32
Identities = 76/208 (36%), Positives = 121/208 (58%), Gaps = 3/208 (1%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
++ F ++ + E + G + + IQ++AI + G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQ---KVVIALGDHLNAKCHACIGGTNVREDIRQL 533
L++ID + QALI+APTRELA QI K ++ + +N A GG +V + +R+L
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVL--AIYGGQDVAQQLRKL 121
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
+ H+VV TPGR+ D I R + + + VLDEAD+ML GF I D+ Q
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQ 181
Query: 714 VILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SAT+P D+ ++++ +M +P I V
Sbjct: 182 TMLFSATIPKDIKKLAKRYMDEPQMIQV 209
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 142 bits (343), Expect = 1e-32
Identities = 71/207 (34%), Positives = 122/207 (58%), Gaps = 4/207 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F+ + L +L+ I G+ +PSAIQ +AI ++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 369 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
+ + + +AL+L PTRELA Q+ + V G HL+ K GG + + L
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G +++ TPGR+ D+ ++A+ + +++ VLDEAD ML GF I + +L Q
Sbjct: 126 RGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQN 185
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SAT ++ ++++ + +P+ I V
Sbjct: 186 LLFSATFSPEIRQLAKGLVNNPIEISV 212
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 142 bits (343), Expect = 1e-32
Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 4/205 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF ++ ++E + + A G + AIQ+ A+ ++G D+I QA +GTGKT F + +L+
Sbjct: 111 TFAELGARQETVDALAAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKTLGFGVPLLE 170
Query: 369 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
Q+ + QAL++ PTREL Q+ K + A G + GG I L
Sbjct: 171 QVLAPAEGGDGTPQALVVVPTRELGIQVAKDLQAAGSTRGVRVLPIYGGVAYEPQIEALR 230
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
SGV ++VGTPGR+ D+ ++ L + ++ VLDEAD ML GF D + + +L D Q
Sbjct: 231 SGVEILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLDLGFLDDVERILAILPEDRQT 290
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRI 791
+L SATMPD ++ +SR F+ PV I
Sbjct: 291 MLFSATMPDPIVALSRRFLRRPVTI 315
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 141 bits (342), Expect = 2e-32
Identities = 66/150 (44%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 548
ID QAL+L PTRELA Q+ ++ I + HL K A GGTN+R+DI +L+ VH
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVH 210
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDE 638
VV+ TPGR+ D++ + + +++ V+DE
Sbjct: 211 VVIATPGRILDLMKKGVAKVDKVQIMVMDE 240
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 141 bits (342), Expect = 2e-32
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 4/212 (1%)
Frame = +3
Query: 174 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 353
D+ TF D+N+ + +L + G+ P+ IQ AI +QGRD++ AQ+G+GKTA F
Sbjct: 40 DENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFV 99
Query: 354 ISILQQID--TSIREC-QALILAPTRELAQQIQKVVIALGDHLNAK-CHACIGGTNVRED 521
I +L ++ TS + +ALIL PTRELAQQ+ V + C +GG
Sbjct: 100 IPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQ 159
Query: 522 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 701
I L+ GV V+V TPGR+ D I + +++++ VLDEAD ML GF D I D+ +
Sbjct: 160 ITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAP 219
Query: 702 ADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
D Q I+ SAT V +++ F +P R+ +
Sbjct: 220 IDRQTIMCSATWDGPVGKIAASFTKNPERVSI 251
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 141 bits (342), Expect = 2e-32
Identities = 70/212 (33%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Frame = +3
Query: 174 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 353
++ + TF++++L LL+ + GF +P+ IQ +AI + G+D++A A +G+GKTA F
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFL 245
Query: 354 ISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 524
+ +L+++ D+ R + LIL PTRELA Q Q V+ L N +GG + +
Sbjct: 246 LPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQE 305
Query: 525 RQLESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 701
+L VV+ TPGR+ D ++ + + +++ +LDEAD +L GFKD+I+ + +
Sbjct: 306 VELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCP 365
Query: 702 ADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ Q +L SAT+ D+V +++ + P+R+ V
Sbjct: 366 TNRQTMLFSATLNDEVKTLAKLSLQQPIRVQV 397
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 141 bits (342), Expect = 2e-32
Identities = 81/196 (41%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSIS 359
++FD++ L ELL+GIYA F+KPS IQ+RA+ + R++IAQ+QSGTGKTA FS++
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
+L +++ QA+ LAP+RELA+Q +VV +G + + E +Q+ +
Sbjct: 152 MLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIV--PDSFEKNKQINA 209
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQV 716
V+VGTPG V D++ R+ + IK+FVLDEAD ML +G DQ V + L D Q+
Sbjct: 210 --QVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQL 267
Query: 717 ILLSATMPDDVLEVSR 764
+L SAT D V + ++
Sbjct: 268 VLFSATFADAVRQYAK 283
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 141 bits (341), Expect = 2e-32
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 8/211 (3%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TFD L E+L+ I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 369 ----QIDTSIRECQ----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 524
Q +TS + ALIL PTRELA Q+ V A H + GG ++ +
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 525 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 704
+L GV +++ TPGR+ D + ++ + +++ VLDEAD ML GF + + +L
Sbjct: 132 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 191
Query: 705 DVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ Q +L SAT ++ +++ ++ +P I V
Sbjct: 192 ERQTLLFSATFSPEIKKLASTYLRNPQTIEV 222
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 141 bits (341), Expect = 2e-32
Identities = 73/203 (35%), Positives = 117/203 (57%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+E+F + +++ +LR I FE+P+ IQ+ AI ++G+D+I A +G+GKT F I
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGI 60
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
+Q+I+ +AL+L PTRELA+Q+Q + H + GG + IRQLE
Sbjct: 61 IQKIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLERA 119
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
VVV TPGR+ D I R + +++ VLDEAD ML GF D + ++ +D Q ++
Sbjct: 120 -DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMM 178
Query: 723 LSATMPDDVLEVSRCFMXDPVRI 791
SAT+ D+ +S +M +P ++
Sbjct: 179 FSATVSKDIQYLSSKYMNNPSKV 201
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 140 bits (340), Expect = 3e-32
Identities = 70/198 (35%), Positives = 115/198 (58%), Gaps = 1/198 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F M L ++ L G+ G+ P+ IQ++AI ++G D+IA A++G+GKTA + + I+ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 372 IDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
++T E ++LI+ PTRELA Q KV LG N K IGG+ + + L SG
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
++V TPGR+ ++ + N +++ DEAD M GF +Q+ D+ +ML Q++L S
Sbjct: 135 IIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQILLFS 194
Query: 729 ATMPDDVLEVSRCFMXDP 782
AT+P ++ E + + P
Sbjct: 195 ATLPRNLAEFLKNTLKQP 212
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 140 bits (340), Expect = 3e-32
Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 6/206 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
FD++NL +E+L G+ A F + + +Q I P ++GRDVIA AQ+GTGKTA + + IL +
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 372 IDT---SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV---REDIRQL 533
+ + A+I+APTRELAQQI + V + A GGT+ + R +
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGM 122
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
G +V+ TPGR+ + + + + FVLDEAD ML GF D I ++K L + Q
Sbjct: 123 AMGADIVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQ 182
Query: 714 VILLSATMPDDVLEVSRCFMXDPVRI 791
++ SATMP + +++ + DP+ +
Sbjct: 183 TVMFSATMPPKIRKLAASILRDPIEV 208
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 140 bits (340), Expect = 3e-32
Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 14/212 (6%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F D++L L+ + +++P+ IQ +AI + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 369 QI-----------DT---SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 506
Q+ DT + AL+L PTRELAQQ+ + + GG
Sbjct: 62 QLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGV 121
Query: 507 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 686
++ E IRQL +G H++V TPGR+ D++ +RAL + + V DEAD ML GFKD+I +V
Sbjct: 122 SIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEV 181
Query: 687 FKMLSADVQVILLSATMPDDVLEVSRCFMXDP 782
K L + Q +L SAT+ D +L SR + P
Sbjct: 182 LKRLPSTRQTLLFSATLDDRMLSFSRRLLRSP 213
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 140 bits (340), Expect = 3e-32
Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Frame = +3
Query: 162 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 341
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++G D+I AQ+G+GKT
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKT 132
Query: 342 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 521
A F+I IL ++ A ILAPTRELAQQI++ +LG + + +GG N+ +
Sbjct: 133 AAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQ 192
Query: 522 IRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
R L H+++ TPGR+ D + + +K V+DEAD +L F + + K++
Sbjct: 193 ARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII 252
Query: 699 -SADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ + L SATM + ++ R + +PV+ V
Sbjct: 253 PTQERTTYLFSATMTSKIDKLQRASLTNPVKCAV 286
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 140 bits (339), Expect = 4e-32
Identities = 72/205 (35%), Positives = 119/205 (58%), Gaps = 4/205 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF+ + L E +R I G+ P+ IQ I +QG+D++A AQ+GTGKTA F + I++
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
Query: 369 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
+ + + +L+L PTRELA Q++ A +L + A GG ++R +++L+
Sbjct: 85 LLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQ 144
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GV ++V TPGR+ D+I ++ + + +K+ VLDEAD ML GF I V + L + Q
Sbjct: 145 GGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNRQN 204
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRI 791
++ SAT + +++ + DPV I
Sbjct: 205 MMFSATFSTPIKKLALGLLNDPVEI 229
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 140 bits (339), Expect = 4e-32
Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 1/204 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F ++ L +L + A G+E PS IQ ++I + G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 545
+ID ++ E Q L+LAPTRELA Q+ + N GG + IR L+ G
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA 144
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
V+VGTPGR+ D + + L + +K VLDEADEML GF D + + Q L
Sbjct: 145 QVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQRALF 204
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SATMP + +V++ ++ + + +
Sbjct: 205 SATMPPQIKKVAQTYLKNATEVRI 228
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 140 bits (338), Expect = 5e-32
Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 1/201 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 368
F NL +L+ + F++PS IQ AI P IQ + D+IA +Q+G+GKTAT +I I
Sbjct: 17 FITFNLDPLILKALDKMNFKEPSRIQTEAI-PLIQKKQDLIALSQTGSGKTATCAIPICN 75
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
+++T + + QALI+ PTRELA Q +G + K A GG + +L+ GV
Sbjct: 76 RVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGGEDSALQQSKLKHGVQ 135
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
V+V TPGR+ D I R + + ++ +LDEADEMLS GF D + + + L+ Q +L S
Sbjct: 136 VLVATPGRLIDFIYSRQIDLSHVETLILDEADEMLSMGFYDDLVFIIQCLNHSHQTLLFS 195
Query: 729 ATMPDDVLEVSRCFMXDPVRI 791
ATMP + +++ M DP +
Sbjct: 196 ATMPAAIQRLAKHHMKDPQEV 216
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 140 bits (338), Expect = 5e-32
Identities = 75/201 (37%), Positives = 115/201 (57%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
FD L + L G+ G+E + +Q+ + QG DVI QA++G+GKTA F + IL++
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
S + QAL+LAPTRELA Q+ + L + GGT++ + + L GV +
Sbjct: 67 CQPS-GKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVDI 125
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
+VGTPGRV DM R + N+ K+ LDEAD ML GF I + + +++ Q +L SA
Sbjct: 126 IVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFPDIMWIVERMTSRQQTLLFSA 185
Query: 732 TMPDDVLEVSRCFMXDPVRIL 794
T P ++++ + FM +P +L
Sbjct: 186 TFPQEIIDAAHEFMNEPDFVL 206
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 140 bits (338), Expect = 5e-32
Identities = 74/207 (35%), Positives = 116/207 (56%), Gaps = 4/207 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F+ + L++EL+ I G+ + IQ+ AI + D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 369 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
++ T ++ ++LI+ PTRELA Q+ V LN + A GG + I QL+
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GV V++ TPGR+ D+ +RALH +++ V DEAD ML GF D + + +L Q
Sbjct: 122 EGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVKRQT 181
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SAT + +R + P I V
Sbjct: 182 LLFSATFSKQIKHFAREMLNAPKTIEV 208
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 140 bits (338), Expect = 5e-32
Identities = 75/204 (36%), Positives = 120/204 (58%), Gaps = 1/204 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 359
++ F + L+ + + + A GF++PS IQ++AI + Q D+I QAQ+GTGKTA F +
Sbjct: 1 MDKFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLP 60
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
I+Q+I+ +++ QALIL PTRELA Q+ + + + GG + + R L+
Sbjct: 61 IVQKIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKK 120
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
GV +VV TPGR I L ++++ VLDEADEML+ GF + + V K D V+
Sbjct: 121 GVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVL 180
Query: 720 LLSATMPDDVLEVSRCFMXDPVRI 791
+ SATMP + +++ +M + + I
Sbjct: 181 MFSATMPPRLKKIAESYMHNSITI 204
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 140 bits (338), Expect = 5e-32
Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 2/208 (0%)
Frame = +3
Query: 180 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 359
+V +FD + + ++ G+ G + P+AIQ+ AI ++ +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQL 533
I Q+ID+S RE QALILAPT EL QI K + L + L IG N+ I +L
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKL 120
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
+ H++VG+ GRV ++I R+ + ++TIK V+DEAD +L + + DV K D Q
Sbjct: 121 KEKPHIIVGSTGRVLELIKRKKISSHTIKTIVIDEADMLLDQNNLAGVKDVIKTTMRDRQ 180
Query: 714 VILLSATMPDDVLEVSRCFMXDPVRILV 797
+++ SA M + S+ D I++
Sbjct: 181 LMIFSAYMNQRAMAESKELTKDAEVIII 208
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 140 bits (338), Expect = 5e-32
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 1/204 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F D+NL L + F+ P+ IQ++A + GRDV+ AQ+GTGKT + + +L+
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 369 QIDTSIREC-QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ S ++ + LI+ PTREL Q+ + + L ++N + GG N+ + L G+
Sbjct: 70 MLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLMQGL 129
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+VV TP R+YD++ RRA+ +I+ FV+DE D ML GFK Q++++ ++L + Q I+
Sbjct: 130 DIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLDLGFKFQVNNIIELLPKNRQSIMF 189
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SATM + V E+ P +I V
Sbjct: 190 SATMTETVEEMIDTNFKAPEKISV 213
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 140 bits (338), Expect = 5e-32
Identities = 76/202 (37%), Positives = 117/202 (57%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+++ +K+ +L + GFEK IQ+ AI + GRDV+ QA +GTGKT +SIS+LQ+
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
I Q LI+APTRELA QI + V + + A GG ++ + L+ G +
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
+V TPGR+ D I R ++ + + VLDEAD ML GF D I + + + + L SA
Sbjct: 123 LVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILDLTPDEKVMSLFSA 182
Query: 732 TMPDDVLEVSRCFMXDPVRILV 797
TMP ++L +S ++ +P + L+
Sbjct: 183 TMPIEILRLSEEYLKNPKQFLL 204
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 140 bits (338), Expect = 5e-32
Identities = 71/201 (35%), Positives = 118/201 (58%), Gaps = 1/201 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
++ F ++ + + ++ + + GF++P+ IQ+ +I +QG D++ QAQ+GTGKT F I +
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
++++ + Q+LILAPTRELA Q+ + + + GG + I+ L+ G
Sbjct: 61 IEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKG 119
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF-KMLSADVQVI 719
+VVGTPGRV D + RR L + I +LDEADEM++ GF D + + K+ + Q +
Sbjct: 120 PQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTM 179
Query: 720 LLSATMPDDVLEVSRCFMXDP 782
L SATMP + + + FM P
Sbjct: 180 LFSATMPKAIQALVQQFMKSP 200
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 140 bits (338), Expect = 5e-32
Identities = 76/208 (36%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+ +F +M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPI 351
Query: 363 LQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 533
L+++ + + +IL PTRELA Q V + L H + K +GG +++ +L
Sbjct: 352 LERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAEL 411
Query: 534 ESGVHVVVGTPGRVYDMITRRALHA-NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
VV+ TPGR D + A A +TI++ VLDEAD ML GF D+++++ L
Sbjct: 412 RLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLPKSR 471
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRIL 794
Q +L SATM V + R + PVRI+
Sbjct: 472 QTMLFSATMTSSVDRLIRAGLNKPVRIM 499
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 139 bits (336), Expect = 9e-32
Identities = 75/203 (36%), Positives = 113/203 (55%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F +++L E L + GFE P+ IQ +AI P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
++ +AL+LAPTRELA QI + + G + IGG + + L
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+V+ TPGR+ D + + + I+ VLDEAD ML GFK Q+ + + L Q +L S
Sbjct: 124 IVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFS 183
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATM +V + +R + DPVR+ V
Sbjct: 184 ATMAGEVADFARAHLRDPVRVEV 206
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 139 bits (336), Expect = 9e-32
Identities = 64/119 (53%), Positives = 88/119 (73%)
Frame = +3
Query: 441 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIK 620
+KV++ LG+ L +AC GGT+ +ED ++L GV VVVGTPGRV D+I ++ L + +K
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLK 245
Query: 621 LFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
LF+LDEADEML RGFKDQI+ +F+ L D+QV L SATM ++LE+++ FM DP ILV
Sbjct: 246 LFILDEADEMLGRGFKDQINKIFQNLPHDIQVALFSATMAPEILEITKQFMRDPATILV 304
Score = 105 bits (253), Expect = 1e-21
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Frame = +3
Query: 225 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL 404
+ + +YGFEKPS IQQ I+P I+G+D IAQAQSGTGKTATFSI+ LQ IDTS QAL
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 405 ILAPTRELAQQ-IQKVVIALGDHL 473
ILAPTRELAQQ I ++ LG +L
Sbjct: 107 ILAPTRELAQQTITRIFFILGVNL 130
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 138 bits (335), Expect = 1e-31
Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 5/207 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+ L L + G+E P+ IQ AI ++G D++ AQ+GTGKTA FS+ ILQ
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 372 IDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
+ R+ + LIL PTRELA QI + + A HLN K GG +R L+
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQ 125
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GV +++ TPGR+ D+ ++ L + +++FVLDEAD ML GF I + +L
Sbjct: 126 GGVDILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHN 185
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+ SATMP ++ ++ + +P ++ V
Sbjct: 186 LFFSATMPHEIQTLANRILVNPKKVEV 212
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 138 bits (335), Expect = 1e-31
Identities = 78/205 (38%), Positives = 114/205 (55%), Gaps = 3/205 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+ L E ++R I G+E P+ IQ +AI ++G DV+ AQ+GTGKTA+F++ +LQ+
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 372 IDTS---IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
+ S R ++LIL PTRELA Q+ + G +L IGG ++ E L G
Sbjct: 353 LAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVLNRG 412
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
V V++ TPGR+ D+ R L V+DEAD ML GF I + +L A Q +
Sbjct: 413 VDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQTLF 472
Query: 723 LSATMPDDVLEVSRCFMXDPVRILV 797
SATM ++ ++ F+ PV I V
Sbjct: 473 FSATMAPEIRRLADAFLRHPVEITV 497
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 138 bits (334), Expect = 1e-31
Identities = 72/214 (33%), Positives = 119/214 (55%), Gaps = 9/214 (4%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 359
V+ F+ L ++ + GF P+ IQ++A+ + G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
+++ ID+++++ QAL+L+PTRELA Q+ + + LG + GG + R I ++
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKR 162
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD---- 707
G H+VV TPGR+ D + ++ + ++K VLDEADEMLS GFK+ + + D
Sbjct: 163 GAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEMLSMGFKEALETILSATQPDDSDS 222
Query: 708 ----VQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ L SATM +V ++ ++ +P + V
Sbjct: 223 VRAACRTWLFSATMSSEVRRLTSTYLENPETVSV 256
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 138 bits (334), Expect = 1e-31
Identities = 72/207 (34%), Positives = 124/207 (59%), Gaps = 4/207 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F ++ L EL + G+E+P+ IQ +AI ++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 369 QIDTS----IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
++ + R +AL+LAPTRELA Q+ + G L + + GG V I++L+
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLK 124
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G ++V TPGR+ D++ ++A+ ++ VLDEAD ML GF D I + + D Q
Sbjct: 125 RGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQT 184
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L +AT + V ++ ++ +P +I V
Sbjct: 185 LLFTATADESVEVLAEFYLNNPTKIKV 211
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 138 bits (334), Expect = 1e-31
Identities = 74/209 (35%), Positives = 119/209 (56%), Gaps = 6/209 (2%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F + L + + + G+++P+AIQ +AI ++G D+IA A++G+GKTA F + +L+
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 369 QIDT----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH--ACIGGTNVREDIRQ 530
++ + AL+L PTRELA Q+ + V ++ K A GG + ++
Sbjct: 62 KLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQS 121
Query: 531 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
L G +VV TPGR+ D++ + AL +K VLDEAD ML GF D++ D+ +V
Sbjct: 122 LSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNV 181
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q +L SAT PD V E++ + +PV I V
Sbjct: 182 QTLLFSATFPDKVKELTEELLRNPVEISV 210
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 138 bits (334), Expect = 1e-31
Identities = 73/204 (35%), Positives = 122/204 (59%), Gaps = 6/204 (2%)
Frame = +3
Query: 198 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI- 374
++ + E+++ + + G EK IQ+ + P ++GRD+I +A++GTGKT F I I+ +I
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 375 -----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
R L+LAPTRELA+Q++K L+ C GGT + + +RQL+
Sbjct: 168 KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDY 225
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
GV V VGTPGRV D++ R AL+ + ++ VLDEAD+ML GF + + + + L Q +
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 720 LLSATMPDDVLEVSRCFMXDPVRI 791
+ SATMP + +++ ++ +P+ +
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTV 309
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 138 bits (333), Expect = 2e-31
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF DMNL LL+ I A F +P+ IQ+ I + G+D+ A A +GTGKTA F + +L+
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 369 QIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
++ RE + L+L PTREL Q+ V L +GG +V+ L S
Sbjct: 242 RLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEAALRS 301
Query: 540 GVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G V++ TPGR+ D + + N I++ +LDEAD ML F++Q+ ++ ++ S Q
Sbjct: 302 GPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKEIIRLCSHQRQT 361
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SATM ++V +++ + +PVRI V
Sbjct: 362 LLFSATMSEEVKDLASVSLRNPVRIFV 388
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 138 bits (333), Expect = 2e-31
Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 5/207 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + + E +L+ I G++ P+ IQ AI + G D++ AQ+GTGKTA F+I +LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 372 IDT-----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
++ R+ ++LI+ PTRELA QI + A G H GG N L+
Sbjct: 144 LNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQ 203
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G+ +++ TPGR+ D++ + LH I+ FVLDEAD ML GF I + L Q
Sbjct: 204 KGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQS 263
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+ SATMP ++ ++ + +PV + V
Sbjct: 264 LFFSATMPPEITRLAASILHNPVEVSV 290
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 138 bits (333), Expect = 2e-31
Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 8/209 (3%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
V +F ++ + L + + P+ IQ I + GRDV+A A +G+GKTA F++ +
Sbjct: 8 VASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPL 67
Query: 363 LQQI------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNA--KCHACIGGTNVRE 518
LQ++ + S + + L+L PTRELAQQ+ ++ H N K A GG +V
Sbjct: 68 LQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 519 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
++ L +G V+V TPGR+ D++ AL N + VLDEAD MLS GF D+++ V + L
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLEAL 187
Query: 699 SADVQVILLSATMPDDVLEVSRCFMXDPV 785
A Q +L SAT P++V ++ + P+
Sbjct: 188 PAKKQTLLYSATFPEEVRALTAKLLHQPL 216
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 138 bits (333), Expect = 2e-31
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TFD L E L R + P+ IQ+RAI + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 369 QIDT-----SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 533
+ T + R +ALIL+PTRELA QI + + L + GG +VR I+ L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
GV ++V TPGR+ D++ +RA+ + +LDEAD ML GF + + D Q
Sbjct: 125 ARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCPDDRQ 184
Query: 714 VILLSATMPDDVLEVSRCFMXDPVRILV 797
++ SATMP + ++S+ + +P ++ V
Sbjct: 185 SMMFSATMPKPIEDLSKKILTNPQKVSV 212
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 138 bits (333), Expect = 2e-31
Identities = 76/202 (37%), Positives = 125/202 (61%), Gaps = 2/202 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 359
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+ IQ ++IAQ+QSGTGKTA F++
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
+L +D SI QA+ ++PT+ELA Q +V+ +G N K I V +++
Sbjct: 129 MLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVPKNVTN--- 185
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQV 716
V++GTPG++ + + ++ L +K+ VLDEAD ++ + +QI + ++L ++V+V
Sbjct: 186 --QVIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKV 243
Query: 717 ILLSATMPDDVLEVSRCFMXDP 782
L SAT V E+ + + DP
Sbjct: 244 CLFSATFSMGVEELIKKIVQDP 265
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 138 bits (333), Expect = 2e-31
Identities = 93/245 (37%), Positives = 134/245 (54%), Gaps = 7/245 (2%)
Frame = +3
Query: 57 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWD-QVVETFDDMNLKEELLRGI 233
SS D D N + +YD + G DTD + +F ++ L + ++ G+
Sbjct: 54 SSTLAVPDGAADGANSSGLQESNYDVEVQL--GDPDTDSPLSSISSFSELGLPQGIIDGL 111
Query: 234 YAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSISILQQID-TSIRECQAL 404
A F+KPS IQ RA+ + R++IAQ+QSGTGKT F ++IL ++D + QAL
Sbjct: 112 LAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQAL 171
Query: 405 ILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV--HVVVGTPGRVY 578
LAP+RELA+QIQ V+ ++G C + + I + E+GV +VVVGTPG V
Sbjct: 172 ALAPSRELARQIQSVIQSIGQF----CTGLVVDAAIPGAISR-ETGVKANVVVGTPGTVM 226
Query: 579 DMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLE 755
D+I RR + +KL V+DEAD ML +G +Q V ML +Q +L SAT PD V
Sbjct: 227 DLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPKTIQTLLFSATFPDHVKS 286
Query: 756 VSRCF 770
+ F
Sbjct: 287 YAEKF 291
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 137 bits (332), Expect = 3e-31
Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 1/201 (0%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F + L E L + G+ + + +Q + + G DV A+A++G+GKTA F I +L
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 545
+I S QAL+L PTRELA Q+ K + L N K GG + + + L
Sbjct: 65 RIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAP 124
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
H+VVGTPGR+ D + +++L +++K+ VLDEAD ML GF D I DV +D Q +L
Sbjct: 125 HIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLF 184
Query: 726 SATMPDDVLEVSRCFMXDPVR 788
SAT P ++ ++S P R
Sbjct: 185 SATYPQEIEQISARVQRQPQR 205
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 137 bits (332), Expect = 3e-31
Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 5/207 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F +L E ++ + G+++P+ IQ+ I I G D++ AQ+GTGKTA FS+ I+ +
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 372 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
ID + ++LIL PTRELA QI + + D L K GG + + +E
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G+ ++V TPGR+ D+I ++ +++FVLDEAD ML GF + + L Q
Sbjct: 124 LGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQT 183
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SATMP ++ ++ + DP +I +
Sbjct: 184 LLFSATMPAEIEILAEAILTDPTKIQI 210
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 137 bits (332), Expect = 3e-31
Identities = 71/206 (34%), Positives = 117/206 (56%), Gaps = 4/206 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ +L + + + GF +P+ IQ ++I P + G DV+A AQ+GTGKTA F I +L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 372 I----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
+ + + L++APTRELA QI +V +G + + GG I +
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAADY 122
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
G+ ++V TPGR++D+I ++ + +K+ VLDEAD ML GF I DV K L A Q +
Sbjct: 123 GIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVKKFLPARHQTL 182
Query: 720 LLSATMPDDVLEVSRCFMXDPVRILV 797
SAT+ +++ +++ + +P+RI +
Sbjct: 183 FFSATINEEIKKLAYSLVKNPIRIQI 208
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 137 bits (332), Expect = 3e-31
Identities = 68/199 (34%), Positives = 111/199 (55%), Gaps = 1/199 (0%)
Frame = +3
Query: 204 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 383
N+ E LL + GF + IQQ++I P ++G+D++AQ+++G+GKT F I + D
Sbjct: 9 NIPEALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVK 68
Query: 384 IRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIRQLESGVHVVVG 560
+ Q +++ PTRELA+Q+ + + + N K GG +R L G H+++G
Sbjct: 69 SNKPQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIG 128
Query: 561 TPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMP 740
TPGR+ D + + L +IK VLDEAD ML GF ++I + + Q +L SAT P
Sbjct: 129 TPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQKQTLLFSATFP 188
Query: 741 DDVLEVSRCFMXDPVRILV 797
+ +++ + DP+ I V
Sbjct: 189 PKIESLAKALLKDPLTIKV 207
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 137 bits (331), Expect = 3e-31
Identities = 69/195 (35%), Positives = 118/195 (60%), Gaps = 2/195 (1%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
++ F + L EE+L+ + G E+P+ IQ++AI ++G++VI +A++GTGKT + + I
Sbjct: 1 MDKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPI 60
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA--CIGGTNVREDIRQLE 536
+++ID S E QA+IL+PT EL QI V+ L L K + +G N++ + +L+
Sbjct: 61 IEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLK 120
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
+ H++VGT GR+ ++I ++ + NTIK V+DE D++L + V K D Q
Sbjct: 121 NKPHILVGTTGRILELINKKKITTNTIKTIVIDEGDKLLDFINIKDVKSVVKSCPRDTQK 180
Query: 717 ILLSATMPDDVLEVS 761
++ SATM + LE +
Sbjct: 181 LIFSATMNEKALETA 195
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 137 bits (331), Expect = 3e-31
Identities = 76/202 (37%), Positives = 114/202 (56%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F NL++ LL I GF P+ IQ++AI P +QG DV+A A++G+GKTA F I +L
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 372 IDT--SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ I + L+L+PTREL+ QI + AL L+ + A +GG ++ + L S
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNP 143
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
VVV TPGR+ ++ +LH +++ VLDEAD + G + QI + + L Q L
Sbjct: 144 DVVVATPGRLLHIMEEASLHLTSVRCLVLDEADRLFELGLQPQIGAIMQKLPESCQRALF 203
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SATMP + E + + +PV I
Sbjct: 204 SATMPTVLAEFTSAGLHNPVVI 225
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 137 bits (331), Expect = 3e-31
Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 5/215 (2%)
Frame = +3
Query: 168 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 347
D + V+TF+D +++ I +EKP+AIQ +A+ + GRDVI A++G+GKTA
Sbjct: 222 DVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAA 281
Query: 348 FSISILQQI--DTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 512
F + ++ I ++ + +I APTRELA QI + A GG +
Sbjct: 282 FVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSK 341
Query: 513 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 692
E ++L++G +VV TPGR+ DM+ +AL VLDEAD M GF+ Q+ +
Sbjct: 342 HEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVG 401
Query: 693 MLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ D Q +L SATMP V +++R + DP+R+ V
Sbjct: 402 QIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTV 436
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 136 bits (330), Expect = 5e-31
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 1/201 (0%)
Frame = +3
Query: 198 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID 377
+ NL EEL+ + +P+ IQ+++I + G D++A +Q+G+GKT + +L ID
Sbjct: 7 NFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAY---LLPLID 63
Query: 378 TSIR-ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVV 554
+ I+ + ALIL PTRELA QI + + IGG + + QL+ V+
Sbjct: 64 SFIKNKTTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVI 123
Query: 555 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 734
+GTPGR+ D + R +L + I + VLDE D ML G K+Q+ ++ K L QV++ SAT
Sbjct: 124 IGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSAT 183
Query: 735 MPDDVLEVSRCFMXDPVRILV 797
MP ++ VS+ ++ +PVRI V
Sbjct: 184 MPKHIIAVSQKYLNNPVRITV 204
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 136 bits (330), Expect = 5e-31
Identities = 73/207 (35%), Positives = 117/207 (56%), Gaps = 5/207 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+ L + LL+ + G+ P+ IQ +AI + GRD++ AQ+GTGKTA F++ IL +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 372 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
+ R + L+L+PTRELA QI + G H+ GG ++ L
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALA 186
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
+GV VVV TPGR+ D + ++ H N +++FVLDEAD+ML GF I + L + Q
Sbjct: 187 AGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKERQN 246
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+ SATMP ++ +++ + +P ++ +
Sbjct: 247 LFFSATMPSEIGKLAGELLKNPAQVAI 273
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 136 bits (330), Expect = 5e-31
Identities = 71/202 (35%), Positives = 114/202 (56%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D NLK+ + + GF++PS +Q+ AI ++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
+ + L++ PTRELA Q+ + G K GGT + I +++ +
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQ-ASI 120
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
VV TPGR+ D++ + N VLDEADEML GF D+I ++F L + Q ++ SA
Sbjct: 121 VVATPGRLQDLLMSGKIKLNP-HFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLMFSA 179
Query: 732 TMPDDVLEVSRCFMXDPVRILV 797
TMP+ + +++ + +P + +
Sbjct: 180 TMPNGIRKLAEQILNNPKTVSI 201
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 136 bits (329), Expect = 6e-31
Identities = 77/205 (37%), Positives = 109/205 (53%), Gaps = 5/205 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ L + +L GF KP+AIQ + + + GRD++ AQ+G+GKT + L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVH 183
Query: 372 I--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
I +R AL+LAPTRELAQQIQ+V G +NA GG IR LE
Sbjct: 184 ITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLE 243
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G +V+ TPGR+ D + R + VLDEAD ML GF+ QI + + D QV
Sbjct: 244 RGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQV 303
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRI 791
++ SAT P +V ++ F+ D ++I
Sbjct: 304 LMWSATWPKEVRNLAEEFLNDYIQI 328
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 136 bits (328), Expect = 8e-31
Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Frame = +3
Query: 201 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 380
M +++L G+ GF++PS IQ +AI G D+I +A+SGTGKT F I L+ ID
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 381 SIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVHVVV 557
I Q LILAPTRE+A QI +V ++G + + K IGG + D +++ + + V
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKV-NNCQIAV 119
Query: 558 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATM 737
G PGR+ +I + L ++LFVLDEAD+++ F+ I+ +F L QVI SAT
Sbjct: 120 GAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETSFQKDINYIFSKLPLSKQVIASSATY 179
Query: 738 PDDVLEVSRCFMXDPVRI 791
P D+ + +M PV +
Sbjct: 180 PGDLEIFLQTYMCSPVLV 197
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 136 bits (328), Expect = 8e-31
Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 5/207 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + + LL+G+ A G +P IQ +AI ++G+D++ AQ+G+GKTA FS+ ILQ+
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 372 I-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
I + +ALILAPTRELA QI++ + + + +GG + I+++
Sbjct: 149 IIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIA 208
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G+ V++ TPGR+ D++ + + + VLDEAD ML GF + + + K A+ Q
Sbjct: 209 PGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQT 268
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
L SATMP ++ ++ + DPVR+ V
Sbjct: 269 ALFSATMPKEIASLAERLLRDPVRVEV 295
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 136 bits (328), Expect = 8e-31
Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 3/205 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D LK E+L ++ G P+ IQ A+ ++G+D+I QA++GTGKT F++ I ++
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 372 IDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
+ S R+ +AL+L PTRELA Q+ + A+ HL K A GGT + L G
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHL--KVVAVYGGTGYGKQKEALLRG 120
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
VV TPGR D + + L + +++ VLDEADEMLS GF++++ + Q +L
Sbjct: 121 ADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLL 180
Query: 723 LSATMPDDVLEVSRCFMXDPVRILV 797
SAT+P ++ +M +PV I V
Sbjct: 181 FSATLPSWAKRLAERYMKNPVLINV 205
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 136 bits (328), Expect = 8e-31
Identities = 74/209 (35%), Positives = 116/209 (55%), Gaps = 4/209 (1%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+ +F M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 363 LQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 533
L+++ + + ++L PTRELA Q V L H + K +GG +++ +L
Sbjct: 335 LERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGEL 394
Query: 534 ESGVHVVVGTPGRVYDMITRRALHA-NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
VV+ TPGR D + A A T+++ VLDEAD ML GF D+++++ L
Sbjct: 395 RLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLPKSR 454
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q +L SATM V ++ R + P RI+V
Sbjct: 455 QTMLFSATMTSTVDKLIRVGLNKPARIMV 483
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 135 bits (327), Expect = 1e-30
Identities = 71/212 (33%), Positives = 125/212 (58%), Gaps = 5/212 (2%)
Frame = +3
Query: 177 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 356
Q+ E F+ ++L +L+G+ + G+ KPS IQ I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 357 SILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA-CIGGTNVREDI 524
I++++ I + ++L PTRELA Q+ V + ++ +GG N+R+
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQE 347
Query: 525 RQLESGVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 701
+ L+S +V+ TPGR D I A + +++++ V+DEAD ML GF+D+++++ +L
Sbjct: 348 QMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLP 407
Query: 702 ADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
++ Q +L SATM + + + PVRI++
Sbjct: 408 SNRQNLLFSATMNSKIKSLVSLSLKKPVRIMI 439
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 135 bits (326), Expect = 1e-30
Identities = 71/202 (35%), Positives = 115/202 (56%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F M L EL++GI G++ P+ IQ++ I ++GRDV+A A++G+GKTA F I + ++
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 372 IDTS--IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ + +ALIL+PTRELA Q K + LG + K +GG ++ + +
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
V+V TPGR + L N+I+ V DEAD + GF +Q+++ L + Q ++
Sbjct: 161 DVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMF 220
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT+P ++E +R + DPV I
Sbjct: 221 SATLPKLLVEFARAGLNDPVLI 242
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 135 bits (326), Expect = 1e-30
Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 4/207 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F MNL +L+G+ GFE P+ IQ + I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 369 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
++ + + LIL PTRELA Q V + + CIGG +++ ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 540 GVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
+V+ TPGR D M + I++ V+DEAD ML GF D+++++ + Q
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQT 439
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRILV 797
+L SATM D V ++ R + PVR+ V
Sbjct: 440 MLFSATMTDKVDDLIRLSLNRPVRVFV 466
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 134 bits (325), Expect = 2e-30
Identities = 75/208 (36%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Frame = +3
Query: 201 MNLKEEL---LRG-IYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
MNL E L LR I+ G+E + +Q A P ++GRD++ A++G+GKT F ++I
Sbjct: 1 MNLPETLPAALRAAIHERGYETLTEVQAAATAPELEGRDLLVSARTGSGKTVAFGLAIAN 60
Query: 369 QI----DTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 527
++ DT + LI+APTRELA Q+ + + L + NA+ C+GG ++R++ R
Sbjct: 61 ELLGGEDTFLIRAATPLGLIIAPTRELALQVARELRWLYANTNAEIATCVGGMDMRDERR 120
Query: 528 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 707
LE G H+VVGTPGR+ D I R + + I+ VLDEADEML GF++++ + + +
Sbjct: 121 ALERGAHIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGFREELELILEDTPKE 180
Query: 708 VQVILLSATMPDDVLEVSRCFMXDPVRI 791
+ ++ SAT+P + ++ + + +RI
Sbjct: 181 RRTLMFSATVPKGIAALATRYQKNGLRI 208
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 134 bits (325), Expect = 2e-30
Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 4/216 (1%)
Frame = +3
Query: 162 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 341
D + +F + NL +LRG+ A F P+ IQQ+ I + G+D++ A +G+GKT
Sbjct: 782 DAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKT 841
Query: 342 ATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 512
A F + IL+++ + + IL PTRELA Q V L + + +GG ++
Sbjct: 842 AAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSL 901
Query: 513 REDIRQLESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF 689
RE L+ V++ TPGR D M + +T+++ VLDEAD ML GF D+++++
Sbjct: 902 REQENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEIL 961
Query: 690 KMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ Q +L SATM D V ++ R + PVR++V
Sbjct: 962 TTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMV 997
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 134 bits (325), Expect = 2e-30
Identities = 69/193 (35%), Positives = 113/193 (58%), Gaps = 8/193 (4%)
Frame = +3
Query: 243 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LI 407
GF KPS IQ +AI + GRD+I A++G+GKT ++ + +++ I + L+
Sbjct: 407 GFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLV 466
Query: 408 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 587
L+PTRELA QI+K ++ ++ K C GG+N+ I +L+ GV+V+V TPGR+ D++
Sbjct: 467 LSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLL 526
Query: 588 TRRALHANTIK---LFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEV 758
T++ VLDEAD M GF+ QI +F + D Q +L SAT P + ++
Sbjct: 527 AANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQL 586
Query: 759 SRCFMXDPVRILV 797
++ + +P+ I+V
Sbjct: 587 AKKVLHNPIEIIV 599
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 134 bits (324), Expect = 2e-30
Identities = 76/204 (37%), Positives = 114/204 (55%), Gaps = 3/204 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SIS 359
+F D+ L +ELL+ + G+E+P+ +Q AI + RD+IA AQ+GTGKTA+F I
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
IL R ++LIL PTRELA Q+ + G + IGG + E LE
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEK 121
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
GV V++ TPGR+ D+ R + ++ ++ V+DEAD ML GF I + L Q +
Sbjct: 122 GVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTL 181
Query: 720 LLSATMPDDVLEVSRCFMXDPVRI 791
L SATMP + +++ F+ +P +I
Sbjct: 182 LFSATMPPAIKKLADRFLSNPKQI 205
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 134 bits (324), Expect = 2e-30
Identities = 75/204 (36%), Positives = 111/204 (54%), Gaps = 5/204 (2%)
Frame = +3
Query: 201 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID- 377
M L E + + + P+ IQ +AI ++G D+I AQ+GTGKTA F++ IL Q+D
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDL 60
Query: 378 --TSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ C Q L+L+PTRELA QI + G ++ + GG +R L+ GV
Sbjct: 61 DRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGV 120
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
HV + TPGR+ D++ + + + K FVLDEAD ML GF + + L Q I
Sbjct: 121 HVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFF 180
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
+ATMP V +++ + +PVRI V
Sbjct: 181 TATMPPKVAQLASGLLNNPVRIEV 204
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 134 bits (324), Expect = 2e-30
Identities = 69/201 (34%), Positives = 118/201 (58%), Gaps = 8/201 (3%)
Frame = +3
Query: 195 DDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 374
D+ + E ++ + G + IQQ + P + G+DV+ +A++GTGKT FS+ +++++
Sbjct: 28 DNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGKTLAFSLPVIEKL 87
Query: 375 DTS--------IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 530
++ R + ++LAPTRELA+Q++ + L+ C GGT + + +
Sbjct: 88 LSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEIFITAPTLDTAC--VYGGTPIGQQESK 145
Query: 531 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
L GV +VVGTPGR+ D++ RRAL + I+ VLDEAD+ML+ GF++ + + A
Sbjct: 146 LRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDEADQMLNVGFEEDVEAILHDCPAGR 205
Query: 711 QVILLSATMPDDVLEVSRCFM 773
Q L SATMP V ++++ F+
Sbjct: 206 QTFLFSATMPQWVKQITKKFL 226
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 134 bits (324), Expect = 2e-30
Identities = 72/205 (35%), Positives = 114/205 (55%), Gaps = 5/205 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F++ + ++ I GF KP+AIQ + + GRD++ AQ+G+GKT + + +
Sbjct: 159 FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVH 218
Query: 372 IDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
I+ R + AL+LAPTRELAQQIQ+V I G + + + GG + R LE
Sbjct: 219 INNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLE 278
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GV +V+ TPGR+ D + R VLDEAD ML GF+ QI + + + D QV
Sbjct: 279 RGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQV 338
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRI 791
++ SAT P +V +++ F+ + +++
Sbjct: 339 LMWSATWPKEVRQLAEEFLNNYIQV 363
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 134 bits (323), Expect = 3e-30
Identities = 66/202 (32%), Positives = 114/202 (56%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F M L + ++RGI G++ P+ IQ++ I + GRDV+A A++G+GKTA F I + ++
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 372 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ T + +ALIL+PTRELA Q Q+ + +G K +GG ++ +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNP 159
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
++V TPGR + ++ +I+ + DEAD + GF +QIH++ L + Q +L
Sbjct: 160 DIIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLPKNRQTLLF 219
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT+P ++E + + +PV +
Sbjct: 220 SATLPKVLVEFATAGLRNPVLV 241
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 134 bits (323), Expect = 3e-30
Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+ TF ++ L + + + ++ P+ IQ + I ++GRDV+ AQ+GTGKTA ++ I
Sbjct: 1 MNTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPI 60
Query: 363 LQQIDTSIREC-----QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 527
L Q+ + R+ AL+LAPTRELA QI A G HL + GG ++
Sbjct: 61 LNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVK 120
Query: 528 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 707
L+ G H++V TPGR+ D++ + + N +++FVLDEAD ML GF + + L
Sbjct: 121 ALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQ 180
Query: 708 VQVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q + SAT+ + E++ + PV + V
Sbjct: 181 RQSLFFSATLAPKITELAHSLLSKPVTVNV 210
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 133 bits (322), Expect = 4e-30
Identities = 75/170 (44%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Frame = +3
Query: 291 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 470
+QGRD + QA++GTGKTA F + IL + + ALILAPTRELA QI+ +
Sbjct: 7 LQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRDFARY 63
Query: 471 LNAKCHACIGGTNVREDIRQLESG-VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 647
LN + A GGT V D++ L G V VV+GTPGR+ D+I R AL + ++ FVLDE D
Sbjct: 64 LNVRTFAFYGGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLDEVDV 123
Query: 648 MLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
ML FK+ I ++ L + QV +SAT P +V E+S + P I V
Sbjct: 124 MLDMNFKEDIDFIYSQLPEEKQVFFVSATFPKEVRELSHRYTKKPEFIKV 173
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 133 bits (322), Expect = 4e-30
Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 3/209 (1%)
Frame = +3
Query: 180 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 359
V TF + L EL + G++ P+AIQ + +QGRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 360 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
ILQ++ + ALILAPTREL QI + ++A+G L +GG + L
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAK 168
Query: 540 GVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS--ADV 710
HVVVG+PGRV D + + + ++K+ VLDEAD +LS F + + + + A+
Sbjct: 169 KPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAER 228
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q +L SATM V ++ + + PV++ V
Sbjct: 229 QTMLFSATMTTKVSKLQKASLKKPVKLEV 257
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 133 bits (322), Expect = 4e-30
Identities = 69/202 (34%), Positives = 113/202 (55%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F M L + LLR I+ GF+ P+ IQ++ I ++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 372 IDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ +++ +ALIL+P RELA Q KVV + + A +GG ++ E L
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKP 190
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+VV TPGR + L ++I+ V DEAD + GF Q+ ++ L Q +L
Sbjct: 191 DIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLF 250
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT+P +++ ++ + DPV +
Sbjct: 251 SATLPRTLVDFAKAGLQDPVLV 272
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 133 bits (321), Expect = 6e-30
Identities = 64/92 (69%), Positives = 79/92 (85%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCI+G DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIA 458
LQ+ID + QA+ILAPTRELA QIQKVV++
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 100 bits (240), Expect = 4e-20
Identities = 50/91 (54%), Positives = 67/91 (73%)
Frame = +3
Query: 525 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 704
R+L + + VV + RV+D++ RRA+ A I+L VLDEAD+ML GFKDQIH++F L
Sbjct: 99 RELANQIQKVVLS--RVFDVLARRAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPT 156
Query: 705 DVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+VQ ILLSATMP VLE ++ FM DPV+IL+
Sbjct: 157 NVQAILLSATMPAHVLEATKMFMQDPVKILI 187
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 133 bits (321), Expect = 6e-30
Identities = 73/200 (36%), Positives = 116/200 (58%), Gaps = 8/200 (4%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
V TF L +LL + G++ P+ IQ +AI + G+ ++A A +G+GKTA+F + I
Sbjct: 109 VLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPI 168
Query: 363 LQQIDT--------SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 518
+ + T R A++LAPTREL Q++ LG L K +GG +
Sbjct: 169 ISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSG 228
Query: 519 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
+ +++ GV +++GTPGRV D++++ + + I FVLDE D ML RGF+DQ+ +F+ L
Sbjct: 229 QLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL 288
Query: 699 SADVQVILLSATMPDDVLEV 758
S QV+L SAT+ +V +V
Sbjct: 289 S-QPQVLLFSATISREVEKV 307
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 133 bits (321), Expect = 6e-30
Identities = 71/202 (35%), Positives = 118/202 (58%), Gaps = 1/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ +L E L + G+E P+ IQ + I + GRD++A A +G+GKTA F + ++ +
Sbjct: 205 FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMR 264
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGVH 548
+ ALIL PTRELA QI++ L L K +GG + + +L+ V
Sbjct: 265 ALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVK 324
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
V++ TPGR+ D+I + ++ +K+ V+DEAD ML GF+ Q+ D+ + + D Q IL+S
Sbjct: 325 VIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVS 384
Query: 729 ATMPDDVLEVSRCFMXDPVRIL 794
AT+P + +++ + +PVRI+
Sbjct: 385 ATIPTSIEQLASQLLHNPVRII 406
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 132 bits (320), Expect = 7e-30
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 4/205 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F+ + + + LL I G+EKP+ IQ RAI + DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 369 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
++ D R + L++APTREL+ QI + + + ++ +GG ++ + L+
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILK 121
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GV +V+ TPGRV + + + L + +++FVLDEAD ML GF +I + +L Q
Sbjct: 122 EGVDIVIATPGRVLEHVD-KGLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKRHQT 180
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRI 791
+L SAT D V ++S+ + P I
Sbjct: 181 LLFSATFSDKVRKLSKLILTKPAFI 205
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 132 bits (320), Expect = 7e-30
Identities = 73/196 (37%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Frame = +3
Query: 207 LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI 386
L + + ++A G+ + +Q++AI + GRD+I Q+Q+G+GKT F + + ++
Sbjct: 48 LSGHMEQAVHAAGWTELMDVQRKAIPYTLDGRDLIVQSQTGSGKTGAFLLPLFDLVNPDK 107
Query: 387 RECQALILAPTRELAQQI----QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVV 554
E Q LIL PTRELA+QI +++ IA + GG + I L++G VV
Sbjct: 108 EEQQVLILTPTRELARQIHEEFEQMKIATPRTNRMEAVLIYGGVGYQPQIDGLKNGAQVV 167
Query: 555 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 734
+GTPGR+ D I + A+T+++ VLDEADEMLS GF + D+ + + D + SAT
Sbjct: 168 IGTPGRILDHIKKDNFDASTLRMLVLDEADEMLSMGFYPDMKDIVEHVPGDRVSYMYSAT 227
Query: 735 MPDDVLEVSRCFMXDP 782
MP V V+R F+ DP
Sbjct: 228 MPPKVRSVAREFLDDP 243
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 132 bits (320), Expect = 7e-30
Identities = 71/198 (35%), Positives = 110/198 (55%), Gaps = 6/198 (3%)
Frame = +3
Query: 222 LRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI----R 389
LR I G+ P+AIQ +AI + GRDV+ AQ+G+GKTA F++ +LQQ+ + R
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPR 76
Query: 390 ECQALILAPTRELAQQIQKVVIALGDHL--NAKCHACIGGTNVREDIRQLESGVHVVVGT 563
+ LIL PTRELA Q+ + + +L K GG ++ + L G +VV T
Sbjct: 77 PTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRGGADIVVAT 136
Query: 564 PGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPD 743
PGR+ D++ AL + + VLDEAD +L GF +++ + ++L Q + SAT P
Sbjct: 137 PGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELLPPRRQNLFFSATFPP 196
Query: 744 DVLEVSRCFMXDPVRILV 797
+ ++ + DP+RI V
Sbjct: 197 AIEVLAESMLHDPLRIEV 214
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 132 bits (320), Expect = 7e-30
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 1/206 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
V + D+ L E+++ I G+ + + +Q AI ++ +DVIA+A +GTGKT F I +
Sbjct: 11 VVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPM 70
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLES 539
++ ID QAL+LAPTRELA QIQ + L + C+ GG + + I L+
Sbjct: 71 VEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITTLKK 130
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
+VV TPGR+ D + RR + + ++ VLDEAD ML GF + + + + +
Sbjct: 131 HPQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLDMGFIHDVTRILDQIKSRKNLG 190
Query: 720 LLSATMPDDVLEVSRCFMXDPVRILV 797
L SAT+ +V+++S + DPV I+V
Sbjct: 191 LFSATISREVMDISWVYQRDPVEIVV 216
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 132 bits (320), Expect = 7e-30
Identities = 74/196 (37%), Positives = 115/196 (58%), Gaps = 1/196 (0%)
Frame = +3
Query: 150 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 329
P T D ++D ++ F M L E +LRG+ F PS IQ RAI G D++ QA+SG
Sbjct: 11 PRTADVEFDLSLQ-FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSG 69
Query: 330 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGT 506
TGKT F++ I + + + Q+L + PTRE+A QI+ V+ +G + N + + IGG
Sbjct: 70 TGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGL 129
Query: 507 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 686
++ +D + L+S VVGTPGR+ +I L+ + IK+ VLDEAD +++ K ++ +
Sbjct: 130 DISQDRKNLQS-CSAVVGTPGRINHLIKSNVLNTSQIKILVLDEADSLITGSLKPEVDQI 188
Query: 687 FKMLSADVQVILLSAT 734
KML Q ++ SAT
Sbjct: 189 VKMLPTKRQTVVCSAT 204
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 132 bits (319), Expect = 1e-29
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQSGTGKTATFS-- 353
+ +F + EEL+R I GFEKP+ IQ +A+ PC + GRD++ A++G+GKT ++
Sbjct: 61 IVSFGHLGFDEELMRQITKLGFEKPTQIQCQAL-PCGLSGRDIVGVAKTGSGKTVSYLWP 119
Query: 354 --ISILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 524
I IL Q + E LILAPTREL QQ+ N A +GG N E
Sbjct: 120 LLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYAKIYNISVGALLGGENKHEQW 179
Query: 525 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 704
+ L++GV +++ TPGR+ +MI ++A + V+DEAD+M S GF+ QI + + +
Sbjct: 180 KMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEKQIRSIMQQIRP 239
Query: 705 DVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
D Q +L +AT+ + + + +PV I +
Sbjct: 240 DRQTLLFTATLKKKIQNLVMDVLRNPVTIKI 270
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 132 bits (319), Expect = 1e-29
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 5/207 (2%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 365
+ F D+ L LLR + G+ KP+ IQ ++I ++GRD++ AQ+GTGKTA+F++ +L
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLL 66
Query: 366 QQIDTSIREC-----QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 530
++ + R + L+LAPTREL QI + H + GG + ++
Sbjct: 67 HRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKA 126
Query: 531 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
LE GV ++V PGR+ D+I + + ++ VLDEAD+ML GF I + L D
Sbjct: 127 LEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDR 186
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRI 791
+L SATMP + + + +P ++
Sbjct: 187 HTVLFSATMPKSIAALVESLLRNPAKV 213
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 132 bits (319), Expect = 1e-29
Identities = 66/201 (32%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F +L ++ + +KP+ IQ R I ++GRD+I Q+Q+GTGKT +F + I+Q
Sbjct: 4 FSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQN 63
Query: 372 IDTSIRECQALILAPTRELAQQI----QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
++ ++E QA+I+APTRELA QI + +++ D++ K GG + I +++
Sbjct: 64 VNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDYI--KTSLITGGMDRERQIGRVKV 121
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
+V+GTPGR+ D+ +AL + +K +++DEAD+ML GF ++ + + L +Q++
Sbjct: 122 SPQIVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALPEKLQMM 181
Query: 720 LLSATMPDDVLEVSRCFMXDP 782
+ SAT+P+ + + +M +P
Sbjct: 182 VFSATIPEKLQPFLKKYMNNP 202
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 132 bits (318), Expect = 1e-29
Identities = 64/190 (33%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Frame = +3
Query: 207 LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI 386
L EL + + G+++P+ IQ+ AI ++G D++ QA +GTGKT F+I I++++
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGK 66
Query: 387 RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVVGT 563
+ +AL+L PTRELA Q+++ + L + + GGT+V++++ L++ V +++GT
Sbjct: 67 PDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGT 126
Query: 564 PGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPD 743
PGR+ D+I R+AL+ + ++ VLDE D+ML GF + I + L + + SAT+P
Sbjct: 127 PGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMFSATVPS 186
Query: 744 DVLEVSRCFM 773
+ +++ F+
Sbjct: 187 RIELLAKRFL 196
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 132 bits (318), Expect = 1e-29
Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 3/210 (1%)
Frame = +3
Query: 177 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 356
+++ F + N ++L GI G+ + IQ +AI +QGRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 357 SILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQ 530
+LQQ+ + + +ALIL+PTR+LA QI + G + +C GG N +
Sbjct: 70 PLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQL 129
Query: 531 LESGVHVVVGTPGRVYDMIT-RRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 707
L GV ++V PGR+ D++ ++ +K VLDEAD + GF+D I+ + K L
Sbjct: 130 LTGGVDIIVACPGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPPR 189
Query: 708 VQVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q +L SATM D+ + + PVRI +
Sbjct: 190 RQNLLFSATMSADIRLLIDKVLHRPVRIQI 219
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 132 bits (318), Expect = 1e-29
Identities = 69/195 (35%), Positives = 112/195 (57%), Gaps = 1/195 (0%)
Frame = +3
Query: 201 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 380
M++ E L + + F +P+ IQ++AI + G+DVI ++++G+GKTA + + +L ++
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEK 60
Query: 381 -SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVV 557
+ +A+I+ PTRELA Q +V LG K GG ++ + +L G +V+
Sbjct: 61 LKGKSVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEELP-GSDIVI 119
Query: 558 GTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATM 737
GTPGR+ D+ ++ L + +K VLDEAD ML GF D I + Q ILLSAT+
Sbjct: 120 GTPGRILDLYNQKYLKLDHVKYLVLDEADLMLDMGFIDDIKKIISFTPEGRQTILLSATL 179
Query: 738 PDDVLEVSRCFMXDP 782
P +V ++ FM +P
Sbjct: 180 PAEVKTIANHFMNNP 194
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 132 bits (318), Expect = 1e-29
Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 5/208 (2%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F E+++ + G+EK + IQQ+AI +G D+ A AQ+GTGKTA FS+ ++Q
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 369 QI-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 533
Q+ S + +ALI APTRELA+QI + A + N A GG + R L
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERML 121
Query: 534 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
E+GV ++V TPGR+ + I + I+ V DEAD +L GF + + + + + Q
Sbjct: 122 ENGVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKIMLDVETNPQ 181
Query: 714 VILLSATMPDDVLEVSRCFMXDPVRILV 797
+++ SAT + E+S+ + P RI V
Sbjct: 182 IMMFSATTSSQLNELSKDILRKPKRIAV 209
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 132 bits (318), Expect = 1e-29
Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ + + E+ + + F + IQ I I+G DVI QAQ+GTGKT F I I+++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 372 IDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
I+ I++ Q+LIL PTREL Q+ +++ L + + GG + + R LE+ H
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPH 124
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+++ TPGR D + R + + +K+ LDEADEML GF++ + + K + + Q +L S
Sbjct: 125 LIIATPGRAIDHLERGKIDLSALKILTLDEADEMLKMGFQEALETILKKIPEERQTVLFS 184
Query: 729 ATMPDDVLEVSRCFMXD 779
AT+P + +++ + D
Sbjct: 185 ATLPPFIKKIASKYQKD 201
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 132 bits (318), Expect = 1e-29
Identities = 75/201 (37%), Positives = 107/201 (53%), Gaps = 1/201 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F ++L LL+ + GF +P+ IQ AI P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 372 -IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
ID +AL++ PTRELA QI + + L H A GG ++R GV
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
V++GTPGR+ D ++ VLDEAD ML GF I + K + A Q + S
Sbjct: 123 VLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTLFFS 182
Query: 729 ATMPDDVLEVSRCFMXDPVRI 791
ATMP + ++R + +P +
Sbjct: 183 ATMPAPIGVLAREMLRNPATV 203
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 132 bits (318), Expect = 1e-29
Identities = 68/200 (34%), Positives = 111/200 (55%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F L EE+++ + + +P+ IQ++ I ++G+D+IA++++G+GKTA F+I I +
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 551
I QAL+L PTRELA Q++ + +G K GG + L+ H+
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHI 125
Query: 552 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 731
VVGTPGRV D L + +K ++DEAD ML GF D + + L ++ ++L SA
Sbjct: 126 VVGTPGRVLDHCETGTLKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLPENITIMLFSA 185
Query: 732 TMPDDVLEVSRCFMXDPVRI 791
TM + + ++ FM PV +
Sbjct: 186 TMGEALYALTDEFMNSPVEV 205
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 132 bits (318), Expect = 1e-29
Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 3/205 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI---SI 362
F D+ L E + R I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+F++ I
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 363 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
L R ++LIL PTRELA Q+ + + G +L IGG ++ + L G
Sbjct: 285 LSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVLSKG 344
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
V V++ TPGR+ D+ R L ++ V+DEAD ML GF + + +L + Q +
Sbjct: 345 VDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNRQTLF 404
Query: 723 LSATMPDDVLEVSRCFMXDPVRILV 797
SATM ++ ++ F+ +P I V
Sbjct: 405 FSATMAPEIRRLADAFLQNPKEITV 429
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 132 bits (318), Expect = 1e-29
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 6/189 (3%)
Frame = +3
Query: 243 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQ---AL 404
G+ + +Q I +GRD++ AQ+G+GKTA F +++ + + D AL
Sbjct: 19 GYAALTEVQSAVIAEEAEGRDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQFNRPDLPMAL 78
Query: 405 ILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 584
I+APTRELA Q+Q+ + L + +C+GG + R + + LE G H+VVGTPGR+ D
Sbjct: 79 IVAPTRELALQVQRELAWLYGEARGQIASCVGGMDPRAERKALERGCHIVVGTPGRLRDH 138
Query: 585 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 764
I R AL + +K VLDEADEML GF++ + + A + +L SAT+P + +++R
Sbjct: 139 IERGALDMSQLKAVVLDEADEMLDFGFREDLEYILDAAPASRRTLLFSATVPRAIADIAR 198
Query: 765 CFMXDPVRI 791
F D +RI
Sbjct: 199 RFQKDALRI 207
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 132 bits (318), Expect = 1e-29
Identities = 69/200 (34%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
FD + L +L I G+ + + +QQ+ I ++G+D++A AQ+GTGKTA+F++ +L+Q
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 372 IDTSIRE---CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
+ + +AL++ PTRELA Q+ + L K A GG N+ + +E G
Sbjct: 84 LSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 143
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
V ++V TPGR++D+I + L +++ V+DEAD ML GF I V ++++ + Q +L
Sbjct: 144 VDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIATEHQTML 203
Query: 723 LSATMPDDVLEVSRCFMXDP 782
SAT D V ++S + P
Sbjct: 204 FSATYSDAVKQLSHKMLNQP 223
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 132 bits (318), Expect = 1e-29
Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 1/247 (0%)
Frame = +3
Query: 60 SERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 239
S+ +D P K+ P+ D+ + T+ D +V F D+ + +++
Sbjct: 68 SDHDDDDDPSADKDSPAADEEQDE----KKVATIADDGKKV--EFSDLGVIPQIVEACTN 121
Query: 240 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 419
GF+ P+ IQ +AI +Q RDVI AQ+G+GKTA F+I ILQ + + + A +LAPT
Sbjct: 122 MGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPT 181
Query: 420 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI-TRR 596
RELA QI + V ALG + + +GG ++ L HV+V TPGR+ D + +
Sbjct: 182 RELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTK 241
Query: 597 ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMX 776
++ V+DEAD +L F I + + + + + +L SATM V ++ R +
Sbjct: 242 GFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAKLQRASLK 301
Query: 777 DPVRILV 797
+PVR+ V
Sbjct: 302 NPVRVEV 308
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 132 bits (318), Expect = 1e-29
Identities = 75/207 (36%), Positives = 121/207 (58%), Gaps = 10/207 (4%)
Frame = +3
Query: 201 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID- 377
++L + L + G IQ+ ++P +QGRD+IA+A++GTGKT F I I++++
Sbjct: 107 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 166
Query: 378 -----TSIREC----QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 530
T+ R + L+LAPTRELA+Q++K + +L+ C GG +
Sbjct: 167 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVSYTIQQSA 224
Query: 531 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
L GV VVVGTPGR+ D+I R+L ++ VLDEAD+ML+ GF++ + + + L
Sbjct: 225 LTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKR 284
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRI 791
Q +L SATMP V +++R ++ +P+ I
Sbjct: 285 QSMLFSATMPTWVKKLARKYLDNPLNI 311
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 132 bits (318), Expect = 1e-29
Identities = 73/219 (33%), Positives = 125/219 (57%), Gaps = 13/219 (5%)
Frame = +3
Query: 174 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 353
++VV+TF ++ ++EEL++ G++ PS IQ A+ ++G+DVI AQ+G+GKT F+
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFA 64
Query: 354 ISILQQIDTSIRECQ------------ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 497
I ILQ + + + + A +L+PTRELA QI + ALG ++ +C +
Sbjct: 65 IPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLV 124
Query: 498 GGTNVREDIRQLESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQ 674
GG + + L HV+V TPGR++D M + ++K VLDEAD +L+ F+
Sbjct: 125 GGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKS 184
Query: 675 IHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPVRI 791
++ + + + + + L SATM V ++ R + +PV+I
Sbjct: 185 LNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKI 223
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 131 bits (317), Expect = 2e-29
Identities = 66/199 (33%), Positives = 116/199 (58%), Gaps = 6/199 (3%)
Frame = +3
Query: 219 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ 398
L R + +++P+ +Q + GRD++ AQ+G+GKT + +++ + + I +
Sbjct: 10 LARALAERNYDRPTPVQLAVLTEEAAGRDLLVSAQTGSGKTLAYGLALAKDLLDGIERFE 69
Query: 399 ------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVG 560
ALI+APTRELA Q+Q+ + L +H + + +C+GG + R + R+L +G H+VVG
Sbjct: 70 RAGAPLALIVAPTRELALQVQRELAWLYEHADGRVVSCVGGMDPRREQRELAAGAHIVVG 129
Query: 561 TPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMP 740
TPGR+ D + R L + +K VLDEADEML+ GF++ + + + + +L SAT P
Sbjct: 130 TPGRLCDHLRRGRLDISELKAVVLDEADEMLNLGFREDMEFILETTPETRRTLLFSATFP 189
Query: 741 DDVLEVSRCFMXDPVRILV 797
++ +++ + RI V
Sbjct: 190 RGIVALAKQYQQQAFRIEV 208
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 131 bits (317), Expect = 2e-29
Identities = 71/202 (35%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+ LK ++ ++ GF +P+ IQ+R I ++ VI Q+Q+GTGKT + + +L +
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 372 IDTSIRECQALILAPTRELAQQIQKVVIAL-----GDHLNAKCHACIGGTNVREDIRQLE 536
ID + Q +I APTRELA QI + + + G + +KC IGGT+ ++ I +L+
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCF--IGGTDKQKSIDKLK 123
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
H+VVGTPGR+ D+I +AL + + V+DEAD ML GF + + + D+Q+
Sbjct: 124 IQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPEDLQM 183
Query: 717 ILLSATMPDDVLEVSRCFMXDP 782
++ SAT+P+ + + +M +P
Sbjct: 184 LVFSATIPEKLKPFLKKYMENP 205
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 131 bits (317), Expect = 2e-29
Identities = 73/202 (36%), Positives = 107/202 (52%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
F +N L L + G+ + +Q A+ + G+DV QA++G+GKTA F + +LQ
Sbjct: 4 FSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQ 63
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV 545
QID S+ + QAL+L PTRELA Q+ + L L N K GG L+
Sbjct: 64 QIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAP 123
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
H++V TPGR+ D + + + + + V+DEAD ML GF D I DV + A Q +L
Sbjct: 124 HIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLF 183
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT P+ + +S DP+ I
Sbjct: 184 SATWPEAIAAISGRVQRDPLAI 205
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 131 bits (316), Expect = 2e-29
Identities = 65/202 (32%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F M L + +G+ G++ P+ IQ++ I + G+DV+A A++G+GKTA F I + ++
Sbjct: 39 FQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLIPMFER 98
Query: 372 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ + +ALIL+PTRELA Q K LG K +GG ++ + L
Sbjct: 99 LKAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLKTALILGGDSMDDQFAALHENP 158
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+++GTPGR+ +I L ++ V DEAD + GF +Q+ ++ + Q +L
Sbjct: 159 DIIIGTPGRLMHVIKEMNLKLQNVEYVVFDEADRLFEMGFAEQLQEIIRRFPETRQTLLF 218
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT+P ++E +R + +PV I
Sbjct: 219 SATLPKVIVEFARAGLTEPVLI 240
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 131 bits (316), Expect = 2e-29
Identities = 62/182 (34%), Positives = 111/182 (60%)
Frame = +3
Query: 237 AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAP 416
A GF+KP+ +Q++A + G+DVIA++ +GTGKT +++ +L++I + QA+ILAP
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 417 TRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR 596
+REL QI +V+ + + IGG NV++ + +L+ H++VGTPGRV+++I +
Sbjct: 81 SRELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAK 140
Query: 597 ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMX 776
L + +K VLDE D+++ ++ + + K D Q++ SAT+ + +V R
Sbjct: 141 KLKMHEVKTIVLDETDQLVLPEHRETMKQIIKTTLRDRQLLCFSATLKKETEDVLRELAQ 200
Query: 777 DP 782
+P
Sbjct: 201 EP 202
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 131 bits (316), Expect = 2e-29
Identities = 66/203 (32%), Positives = 115/203 (56%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F ++L ++R + G+E + IQ+++I ++GRD++ + +G+GKT F I I++
Sbjct: 56 SFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIE 115
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
+ + ALI+ PTRELA QI + +L + IGGTN+ D++ L +H
Sbjct: 116 HALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLH 175
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
V+VGTPGR+ D+ R+ L N +K VLDE D ML GF + + + ++ Q +L S
Sbjct: 176 VIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDVKKLVGGMTQREQTMLFS 235
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
AT+ + + + + +PV + +
Sbjct: 236 ATLEPNQKNLIQSLLKNPVEVKI 258
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 131 bits (316), Expect = 2e-29
Identities = 79/207 (38%), Positives = 127/207 (61%), Gaps = 7/207 (3%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--QGRDVIAQAQSGTGKTATFSI 356
V++F+D+ LK ELL GI + GF KPS+IQ+RA+ + Q +++IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 357 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 533
++L +ID + CQ L +APTREL QI +V I + + N K I G + DI +
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMNNVKITCAIKG--LSPDILEG 164
Query: 534 ESGVHVVVGTPGRVYDMIT-RRALHAN--TIKLFVLDEADEML-SRGFKDQIHDVFKMLS 701
+ +++GTPG + T +L+ N +K+FVLDEAD ++ + F + + ++
Sbjct: 165 QINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKVFVLDEADILIETPEFLNIAKRIKSKVT 224
Query: 702 ADVQVILLSATMPDDVLEVSRCFMXDP 782
+ Q++L SAT + V++ + F+ P
Sbjct: 225 NNCQILLFSATYDERVMDFAHDFVPQP 251
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 131 bits (316), Expect = 2e-29
Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 4/206 (1%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 365
+TF ++NL LLR G++KP+ IQ I + GRD+ A A +G+GKTA F++ L
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTL 226
Query: 366 QQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
+++ + + LIL PTRELA QI ++ L + KC +GG +VRE L
Sbjct: 227 ERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLR 286
Query: 537 SGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 713
S +VV TPGR+ D + ++ + + + +LDEAD +L GF +I ++ ++ Q
Sbjct: 287 SMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQ 346
Query: 714 VILLSATMPDDVLEVSRCFMXDPVRI 791
+L SATM ++V E+ + + P+R+
Sbjct: 347 TMLFSATMTEEVKELVKLSLNKPLRL 372
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 131 bits (316), Expect = 2e-29
Identities = 83/258 (32%), Positives = 132/258 (51%), Gaps = 10/258 (3%)
Frame = +3
Query: 54 YSSERRSE--DWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLR 227
Y E +E D +S+ + + D DP T D + +F MNL LLR
Sbjct: 179 YDEEGENEVVDSDSESEEETAAEIARKDAFFSSDPTTTDPT---LPSSFTAMNLSRPLLR 235
Query: 228 GIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----E 392
+ + F P+ IQ RAI + GRD++ A +G+GKTA F + IL+++ R
Sbjct: 236 ALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAA 295
Query: 393 CQALILAPTRELAQQIQKVVIALGDH--LNAKCHACIGGTNVREDIRQLESGVHVVVGTP 566
C+ L+L PTRELA Q + V AL + L+ + +GG ++ L + +++ TP
Sbjct: 296 CRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQAHTLRTLPDILIATP 355
Query: 567 GRVYDMITRR-ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPD 743
GR+ D +T + + + + V+DEAD ML GF D++ ++ K Q +L SATM D
Sbjct: 356 GRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACPRSRQTMLFSATMTD 415
Query: 744 DVLEVSRCFMXDPVRILV 797
V E+ + + P+R+ V
Sbjct: 416 SVDELVKLSLDKPIRVFV 433
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 130 bits (315), Expect = 3e-29
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Frame = +3
Query: 300 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 479
+D+I QA+SGTGKT FS+ L+ ID + Q LILAPTRE+A QIQ + A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 480 -KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 656
+ H IGGT D ++L+ H+ VGTPGR+ +I L TI+LFVLDEAD++L
Sbjct: 64 LRSHVFIGGTLFGPDRQKLKK-CHIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKLLD 122
Query: 657 RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMXDPV 785
F++Q++ ++ LS + Q++ LSAT P+ + + +M +P+
Sbjct: 123 DTFQEQVNWIYNHLSDNKQMLALSATYPEYLAKHLTKYMREPM 165
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 130 bits (315), Expect = 3e-29
Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 3/203 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F ++ L L+ + G+ + IQ AI + G+DV+ AQ+GTGKTA F++ ++ +
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 372 I---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 542
+ R +AL++APTRELA Q+ IGG + + ++L+ G
Sbjct: 64 LMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDRG 123
Query: 543 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 722
V V++ TPGR+ D R L ++ V+DEAD ML GF I +FKM Q +
Sbjct: 124 VDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQTLF 183
Query: 723 LSATMPDDVLEVSRCFMXDPVRI 791
SATMP ++ +++ F+ DPVRI
Sbjct: 184 FSATMPPEITRLTKQFLKDPVRI 206
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 130 bits (315), Expect = 3e-29
Identities = 71/204 (34%), Positives = 117/204 (57%), Gaps = 4/204 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L L++ + G+ P+ IQ +AI + G++V+A AQ+GTGKTA+F + +L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 372 IDTS--IR--ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
+ IR +A+IL PTRELA Q+++ + +L A GG + ++L
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
GV ++V TPGR+ DM T+RA+ + + + VLDEAD ML GF + I+ + + L Q +
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPEQRQNL 182
Query: 720 LLSATMPDDVLEVSRCFMXDPVRI 791
L SAT+ V +++ + D + I
Sbjct: 183 LFSATLSKQVKALAKSAIPDAIEI 206
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 130 bits (315), Expect = 3e-29
Identities = 79/224 (35%), Positives = 120/224 (53%), Gaps = 19/224 (8%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+ +FDD+ L E + + ++KP+ +Q+ AI I GRD++A AQ+G+GKTA F + I
Sbjct: 294 ITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPI 353
Query: 363 LQQI--------DTSIRECQ-------ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 497
L Q+ S R+ L+LAPTRELA QI + +
Sbjct: 354 LNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLY 413
Query: 498 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 677
GG N E +R+L+ G H++V TPGR+ DMITR + I+ VLDEAD ML GF+ QI
Sbjct: 414 GGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQI 473
Query: 678 HDVFKML----SADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ + L + Q ++ SAT P + E++ F+ + + + V
Sbjct: 474 RRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAV 517
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 130 bits (314), Expect = 4e-29
Identities = 67/200 (33%), Positives = 110/200 (55%), Gaps = 2/200 (1%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F M L +L+GI G++ P+ IQ++ I ++GRD++A A++G+GKTA F I + ++
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 372 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ + +ALIL+PTRELA Q K + LG K +GG N+ +
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNP 157
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+++ TPGR + L N I+ V DEAD + GF +QI+++ L Q +L
Sbjct: 158 DILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINRLPESRQTLLF 217
Query: 726 SATMPDDVLEVSRCFMXDPV 785
SAT+P +++ ++ + DPV
Sbjct: 218 SATLPKLLVDFAKIGLNDPV 237
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 130 bits (314), Expect = 4e-29
Identities = 70/199 (35%), Positives = 108/199 (54%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF +MNL LL + KP+ +Q +AI + G D+IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 369 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
+ E + LIL P+RE+AQQI KV + L + IGGT + QL+
Sbjct: 94 TLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPR 152
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
+++ TPGR+ D ++ L +++ VLDEAD ML GF Q+ + L Q ++ S
Sbjct: 153 LIIATPGRMNDHLSGNKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQTMMFS 212
Query: 729 ATMPDDVLEVSRCFMXDPV 785
A+ +V +++ FM V
Sbjct: 213 ASFGSNVESIAQLFMKPDV 231
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 130 bits (314), Expect = 4e-29
Identities = 69/206 (33%), Positives = 113/206 (54%), Gaps = 1/206 (0%)
Frame = +3
Query: 183 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 362
+ +F +M L L + + F P+ +Q +AI ++G+D++ AQ+GTGKT F+I +
Sbjct: 1 MNSFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPL 60
Query: 363 LQQIDTSIRECQALILAPTRELAQQI-QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 539
+ ++ AL++ PTRELAQQ+ ++ L + K IGG + + QL+
Sbjct: 61 IAKLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQR 120
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
+V+GTPGR+ D I R+ L N + VLDE D M GF QI + K L Q +
Sbjct: 121 RPRIVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMRQNL 180
Query: 720 LLSATMPDDVLEVSRCFMXDPVRILV 797
+ SAT+P D+++++ + P R+ V
Sbjct: 181 MFSATLPGDIVKLAEKYSNQPERVSV 206
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 130 bits (314), Expect = 4e-29
Identities = 75/213 (35%), Positives = 117/213 (54%), Gaps = 10/213 (4%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
+F + L E L+R I A G+ +P+ +QQRAI +QGRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 369 QI------DTSIR----ECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 518
++ D S R + + L+L PTRELA Q+ LN GG +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 519 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
++ + GV V+V PGR+ D+ + ++ + +++ VLDEAD ML GF + V L
Sbjct: 122 QVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLARL 181
Query: 699 SADVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
A Q +L SAT D+ +++ + +P RI V
Sbjct: 182 PAKRQNLLFSATFSKDITDLADKLLHNPERIEV 214
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 130 bits (314), Expect = 4e-29
Identities = 67/204 (32%), Positives = 114/204 (55%), Gaps = 2/204 (0%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 365
+ F+ M L++ L+ + P+ IQQ+AI ++ RDVI + +GTGKT + + +
Sbjct: 3 QLFESMELEKSLVEALKKESITVPTDIQQKAIPEALKNRDVILHSSTGTGKTLAYLLPLF 62
Query: 366 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHAC--IGGTNVREDIRQLES 539
++ +E QALIL PT ELA Q+ + + L + K + IG N+ I +L+
Sbjct: 63 MKLSAEKKEMQALILVPTHELAIQVVRQIELLSQNSEIKATSTPIIGDVNIMRQIDKLKL 122
Query: 540 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 719
H++VGTPGR+ ++I +R + A+TIK ++DEAD +L D I + K + Q++
Sbjct: 123 KPHIIVGTPGRILELIQKRKISAHTIKTIIIDEADRLLDDYNLDNIKAIIKTTLKERQIV 182
Query: 720 LLSATMPDDVLEVSRCFMXDPVRI 791
+ SAT+ +E + M +P+ I
Sbjct: 183 MCSATISKKTVERAMPLMKEPLVI 206
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 130 bits (314), Expect = 4e-29
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 10/212 (4%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 365
++F D N++ +++ + G P IQ + + G D+I QA++GTGKT F I L
Sbjct: 37 KSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLGFGIPAL 96
Query: 366 QQI----DTSIREC------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 515
Q++ D + QAL++ PTRELA Q+ K + NA+ GG
Sbjct: 97 QRVVGRDDPGFDKLAVPGAPQALVIVPTRELAVQVAKDLENAARKRNARIATIYGGRAYE 156
Query: 516 EDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKM 695
+ L+ GV +VVGTPGR+ D+ ++ L +K+ +LDEADEML GF + +
Sbjct: 157 PQVDSLQKGVEIVVGTPGRLIDLYKQKHLSLKNVKIVILDEADEMLDLGFLPDVETLIAG 216
Query: 696 LSADVQVILLSATMPDDVLEVSRCFMXDPVRI 791
A Q +L SATMP V+ ++R +M P I
Sbjct: 217 TPAVRQTLLFSATMPGPVIAMARRYMTQPTHI 248
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 130 bits (314), Expect = 4e-29
Identities = 66/202 (32%), Positives = 114/202 (56%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 368
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 369 QIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
++ +AL+++PTRELA Q KVV LG +C +GG + E +
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+++ TPGR+ +I L + ++ V DEAD + GF+DQ+ + K + Q +L
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT+P +++ ++ + DP+ +
Sbjct: 205 SATLPKMLVDFAKAGLTDPMLV 226
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 130 bits (314), Expect = 4e-29
Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 10/207 (4%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D NL L+ I+ GF + IQ + + ++G+D I +AQ+GTGKTA F ISI+ Q
Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70
Query: 372 I-------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 530
+ + + E +ALI+APTREL QI K AL + +GG + + ++Q
Sbjct: 71 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQ 130
Query: 531 LESG-VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML--S 701
LE+ ++V TPGR+ D R +H + +++ VLDEAD ML GF Q+ + +
Sbjct: 131 LEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHK 190
Query: 702 ADVQVILLSATMPDDVLEVSRCFMXDP 782
+ Q +L SAT DDV+ +++ + DP
Sbjct: 191 GERQTLLFSATFTDDVMNLAKQWTVDP 217
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 130 bits (314), Expect = 4e-29
Identities = 65/202 (32%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F M L + +GI G++ P+ IQ++ I + G+DV+A A++G+GKTA F + + ++
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157
Query: 372 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ T + +ALIL+PTRELA Q K LG K +GG + + L
Sbjct: 158 LKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENP 217
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+++ TPGR+ + +L +++ V DEAD + GF +Q+ ++ L Q +L
Sbjct: 218 DIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLF 277
Query: 726 SATMPDDVLEVSRCFMXDPVRI 791
SAT+P ++E +R + +PV I
Sbjct: 278 SATLPKLLVEFARAGLTEPVLI 299
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 130 bits (313), Expect = 5e-29
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F+++ L +LL I G+ +P+ IQ +AI + G D+I AQ+GTGKTA +++ IL +
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 372 IDTSI-RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 548
I + +A+I PTREL QI+ + L + + + A GG + L+ GV
Sbjct: 67 IKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEHLQKGVD 126
Query: 549 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 728
++V TPGR D+ + +K VLDEAD+M+ GF Q+ + +++ Q +L S
Sbjct: 127 IIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMDMGFMPQLRKMLEVIPRKRQNLLFS 186
Query: 729 ATMPDDVLEVSRCFMXDPVRILV 797
ATM + V ++ F+ P++I V
Sbjct: 187 ATMSERVERLTEEFLEYPMKIEV 209
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 130 bits (313), Expect = 5e-29
Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 7/209 (3%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D LK EL I GFE PS +Q +A+ + G D++AQA+SG GKTA F ++L+Q
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQ 97
Query: 372 IDTSIR----ECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLE 536
++ + CQA++L RELA QI++ +L A GG E+++QL+
Sbjct: 98 VEKVPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLPYATTGVFFGGIPEDENVKQLK 157
Query: 537 SGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADV 710
V ++VGTPGR+ +I +A +K FV+DE D L + + ++F L +
Sbjct: 158 KEVPAIIVGTPGRMKALIQNKAFDTTHVKWFVVDEFDRCLEDVKMRRDVQEIFMKLPKEK 217
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRILV 797
QV++ SATM D++ +V++ FM D I V
Sbjct: 218 QVMMFSATMTDELRDVAKKFMKDATEIYV 246
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 130 bits (313), Expect = 5e-29
Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 4/205 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--- 359
+F+ L ELLR +Y+ GF PS IQ ++ +Q RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 360 ILQQIDTSIRECQA-LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 536
LQ+I R L+L+PTRELA QIQ + G C GG ++++E
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
GV +VV TPGR+ D++ + + + + VLDEAD ML GF+ QI + + Q
Sbjct: 282 RGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQT 341
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRI 791
++ +AT P +V +++ + +P ++
Sbjct: 342 LMYTATWPKEVRKIAADLLVNPAQV 366
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 130 bits (313), Expect = 5e-29
Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Frame = +3
Query: 174 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 353
++ +TF D+ + + L G+ KP+ IQ AI +QGRD+I A++G+GKT F+
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 354 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 533
+ IL + + + AL+L PTRELA QI + ALG + + +GG + L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 534 ESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 710
H+++ TPGR+ D + + + +K V+DEAD +L+ F+ ++ + K++ D
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199
Query: 711 QVILLSATMPDDVLEVSRCFMXDPVRILV 797
+ L SATM V ++ R + +PV+ V
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAV 228
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 129 bits (312), Expect = 7e-29
Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 2/204 (0%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F D+ ++++L+ + P+ +Q+++I ++G+D++A AQ+GTGKTA F + I+Q
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 372 IDTSIREC--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 545
+ R ALIL PTRELAQQ+ + +H + + GGT++ +LE G
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGA 128
Query: 546 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 725
+++ TPGR+ D + ++ + + VLDEAD ML GF + + + L D Q++L
Sbjct: 129 DILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDKQIMLF 188
Query: 726 SATMPDDVLEVSRCFMXDPVRILV 797
SAT + ++ M PV + V
Sbjct: 189 SATFEKRIKTIAYKLMDSPVEVEV 212
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 129 bits (312), Expect = 7e-29
Identities = 73/211 (34%), Positives = 114/211 (54%), Gaps = 8/211 (3%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF D L ++ + I A G+ +P+ IQ +AI + G DV+ AQ+GTGKTA FS+ IL
Sbjct: 21 TFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILN 80
Query: 369 QIDTSIRE--------CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 524
++ E +ALIL PTRELA Q+ V + GG ++ I
Sbjct: 81 RLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQI 140
Query: 525 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 704
+ L GV +V+ TPGR+ D + +++++ +++ VLDEAD ML GF + + +L
Sbjct: 141 QTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPK 200
Query: 705 DVQVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q +L SAT ++ ++++ FM P I V
Sbjct: 201 TRQNLLFSATFSPEIQKLAKSFMVSPTLIEV 231
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 129 bits (311), Expect = 9e-29
Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 4/205 (1%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF+D N LL + + GF KP+ IQ AI + D++A AQ+GTGKTA + + IL
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILH 61
Query: 369 QI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR---EDIRQLE 536
+I +++ L+L PTRELA QI + + +N A GG + + + L
Sbjct: 62 KIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKALT 121
Query: 537 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 716
G ++V+ TPGR+ + + IK VLDEAD ML GF D I V L + Q
Sbjct: 122 DGANIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLDMGFYDDIVRVISYLPTERQT 181
Query: 717 ILLSATMPDDVLEVSRCFMXDPVRI 791
I+ SATMP + ++ M DP +I
Sbjct: 182 IMFSATMPTKMRALANKLMKDPQQI 206
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 129 bits (311), Expect = 9e-29
Identities = 73/211 (34%), Positives = 109/211 (51%), Gaps = 10/211 (4%)
Frame = +3
Query: 189 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 368
TF + +++E+ R + G +P AIQ+ + + G D+I QA++G GKT F + +LQ
Sbjct: 11 TFASLGVRDEICRALAEEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFGVPLLQ 70
Query: 369 QIDTSIRE-----CQALILAPTRELAQQIQKVVIALGDHLNA-----KCHACIGGTNVRE 518
++ T + +ALI+ PTREL Q+ + +L A + GG
Sbjct: 71 RVTTDTEKELSGIPRALIVVPTRELCLQVHSDLSLAAKYLTAGDRKLSVVSIYGGRPYEP 130
Query: 519 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 698
I L G VVVGTPGR+ D+ + L + + VLDEADEML GF I + +
Sbjct: 131 QIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILRQT 190
Query: 699 SADVQVILLSATMPDDVLEVSRCFMXDPVRI 791
Q +L SATMPD ++ ++R FM P I
Sbjct: 191 PDTRQAMLFSATMPDPIITLARTFMNQPTHI 221
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 129 bits (311), Expect = 9e-29
Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 8/210 (3%)
Frame = +3
Query: 192 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 371
F + L EL+ + A G+E P+ IQ AI + G D++A AQ+GTGKTA F + L++
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 90
Query: 372 I--------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 527
+ ++ + L+L PTRELA QI + V + +L + GG N+ +
Sbjct: 91 LKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTA 150
Query: 528 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 707
L +G +VV T GR+ D + ++ + N +++ VLDEAD ML GF D I + +ML
Sbjct: 151 DLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQ 210
Query: 708 VQVILLSATMPDDVLEVSRCFMXDPVRILV 797
Q +L SAT + ++++ FM P + V
Sbjct: 211 RQTLLFSATFSAPIRKLAQDFMNAPETVEV 240
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 129 bits (311), Expect = 9e-29
Identities = 76/209 (36%), Positives = 114/209 (54%), Gaps = 7/209 (3%)
Frame = +3
Query: 186 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 365
+ F++ N + ++ I GF P+AIQ + + GRD++ AQ+G+GKT + + +
Sbjct: 229 QDFEEGNFPDFVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLPGI 288
Query: 366 QQI--DTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNAKC-HACI-GGTNVREDI 524
I ++ + L+LAPTRELAQQIQ VV G H + CI GG +
Sbjct: 289 VHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQV 348
Query: 525 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 704
R LE GV VV+ TPGR+ D + R + VLDEAD ML GF+ QI + + +
Sbjct: 349 RDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 408
Query: 705 DVQVILLSATMPDDVLEVSRCFMXDPVRI 791
D QV++ SAT P +V ++ F+ D ++I
Sbjct: 409 DRQVLMWSATWPKEVQALAEDFLHDYIQI 437
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 873,033,495
Number of Sequences: 1657284
Number of extensions: 19839052
Number of successful extensions: 60982
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 55779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59185
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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