Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_N07
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  

>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 353 QFAPKYVSHFN*RYILPGHWLQYWRSYKRIV*TIKKPLSSMHVAHIGR 496
           +F  KY SHF   Y+      Q +   + I   IK+ L +  ++H+ +
Sbjct: 85  KFIRKYGSHFIESYVTGNALYQVFVFRRSIYLQIKERLKTQGISHLDK 132


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 284 ITTIIVQIFSSFFHFYFPCCKCK 216
           I  +++ IF+S+F + F    CK
Sbjct: 378 IYVLLINIFASYFAYIFGKFACK 400


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 284 ITTIIVQIFSSFFHFYFPCCKCK 216
           I  +++ IF+S+F + F    CK
Sbjct: 378 IYVLLINIFASYFAYIFGKFACK 400


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 284 ITTIIVQIFSSFFHFYFPCCKCK 216
           I  +++ IF+S+F + F    CK
Sbjct: 378 IYVLLINIFASYFAYIFGKFACK 400


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 284 ITTIIVQIFSSFFHFYFPCCKCK 216
           I  +++ IF+S+F + F    CK
Sbjct: 378 IYVLLINIFASYFAYIFGKFACK 400


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,391
Number of Sequences: 336
Number of extensions: 4416
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)