Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_N07
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053560-1|AAH53560.1| 292|Homo sapiens BCDIN3 domain containin... 136 6e-32
BC018935-1|AAH18935.2| 689|Homo sapiens bin3, bicoid-interactin... 51 5e-06
BC016396-1|AAH16396.1| 220|Homo sapiens BCDIN3 protein protein. 51 5e-06
BC000556-1|AAH00556.2| 689|Homo sapiens bin3, bicoid-interactin... 51 5e-06
AK000264-1|BAA91040.1| 220|Homo sapiens protein ( Homo sapiens ... 51 5e-06
AF264752-1|AAF74767.1| 220|Homo sapiens unknown protein. 51 5e-06
AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ... 31 4.7
AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple ... 31 4.7
>BC053560-1|AAH53560.1| 292|Homo sapiens BCDIN3 domain containing
protein.
Length = 292
Score = 136 bits (330), Expect = 6e-32
Identities = 76/183 (41%), Positives = 108/183 (59%), Gaps = 15/183 (8%)
Frame = +3
Query: 285 PGAVKFGNFINYYSFHNVAERINNLHPNM----FPTLTED--IYCLDIGCNTGDLTRELY 446
PGA FGNF +Y FH +R+ L P + FP E+ I LD+GCN+GDL+ LY
Sbjct: 26 PGAAPFGNFPHYSRFHPPEQRLRLLPPELLRQLFPESPENGPILGLDVGCNSGDLSVALY 85
Query: 447 KLLKNLYP--QCM-----LHILAVDIDSVLINRAQ-ESNTERNIEYTTANVMAKSDRDSI 602
K +L C +L DID VL+ RA+ E + + T + M + R +
Sbjct: 86 KHFLSLPDGETCSDASREFRLLCCDIDPVLVKRAEKECPFPDALTFITLDFMNQRTRKVL 145
Query: 603 -NEYLKKNGRSMFDITFCFSVSMWIHLNNGDNGLREFLEHIKTISKSIIIEPQPWKCYRQ 779
+ +L + GRS+FDI FC S++MWIHLN+GD+GL EFL H+ ++ +++EPQPWKCYR
Sbjct: 146 LSSFLSQFGRSVFDIGFCMSITMWIHLNHGDHGLWEFLAHLSSLCHYLLVEPQPWKCYRA 205
Query: 780 AXK 788
A +
Sbjct: 206 AAR 208
>BC018935-1|AAH18935.2| 689|Homo sapiens bin3, bicoid-interacting
3, homolog (Drosophila) protein.
Length = 689
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +3
Query: 510 VLINRAQESNTERNIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNG 689
V ++ A S N+ + T N + DRD + E +D+ C S++ W+HLN G
Sbjct: 539 VPLDGADTSVFPNNVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWG 592
Query: 690 DNGLREFLEHIKTISKS---IIIEPQPWKCY 773
D GL+ I + +++EPQPW Y
Sbjct: 593 DEGLKRMFRRIYRHLRPGGILVLEPQPWSSY 623
Score = 33.9 bits (74), Expect = 0.67
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 KFGNFINYYSFHNVA---ERINNLHPNMFPTLTEDIYCLDIGCNTGDLTRELYKLLKNLY 467
++GN+ YY + N + R+ L P F D+ LD+GCN G LT +
Sbjct: 414 QYGNYCKYYGYRNPSCEDGRLRVLKPEWFRG--RDV--LDLGCNVGHLT---LSIACKWG 466
Query: 468 PQCMLHILAVDIDSVLINRAQES 536
P M + +DIDS LI+ A+++
Sbjct: 467 PSRM---VGLDIDSRLIHSARQN 486
>BC016396-1|AAH16396.1| 220|Homo sapiens BCDIN3 protein protein.
Length = 220
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +3
Query: 510 VLINRAQESNTERNIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNG 689
V ++ A S N+ + T N + DRD + E +D+ C S++ W+HLN G
Sbjct: 70 VPLDGADTSVFPNNVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWG 123
Query: 690 DNGLREFLEHIKTISKS---IIIEPQPWKCY 773
D GL+ I + +++EPQPW Y
Sbjct: 124 DEGLKRMFRRIYRHLRPGGILVLEPQPWSSY 154
>BC000556-1|AAH00556.2| 689|Homo sapiens bin3, bicoid-interacting
3, homolog (Drosophila) protein.
Length = 689
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +3
Query: 510 VLINRAQESNTERNIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNG 689
V ++ A S N+ + T N + DRD + E +D+ C S++ W+HLN G
Sbjct: 539 VPLDGADTSVFPNNVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWG 592
Query: 690 DNGLREFLEHIKTISKS---IIIEPQPWKCY 773
D GL+ I + +++EPQPW Y
Sbjct: 593 DEGLKRMFRRIYRHLRPGGILVLEPQPWSSY 623
Score = 33.9 bits (74), Expect = 0.67
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 297 KFGNFINYYSFHNVA---ERINNLHPNMFPTLTEDIYCLDIGCNTGDLTRELYKLLKNLY 467
++GN+ YY + N + R+ L P F D+ LD+GCN G LT +
Sbjct: 414 QYGNYCKYYGYRNPSCEDGRLRVLKPEWFRG--RDV--LDLGCNVGHLT---LSIACKWG 466
Query: 468 PQCMLHILAVDIDSVLINRAQES 536
P M + +DIDS LI+ A+++
Sbjct: 467 PSRM---VGLDIDSRLIHSARQN 486
>AK000264-1|BAA91040.1| 220|Homo sapiens protein ( Homo sapiens
cDNA FLJ20257 fis, clone COLF7231. ).
Length = 220
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +3
Query: 510 VLINRAQESNTERNIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNG 689
V ++ A S N+ + T N + DRD + E +D+ C S++ W+HLN G
Sbjct: 70 VPLDGADTSVFPNNVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWG 123
Query: 690 DNGLREFLEHIKTISKS---IIIEPQPWKCY 773
D GL+ I + +++EPQPW Y
Sbjct: 124 DEGLKRMFRRIYRHLRPGGILVLEPQPWSSY 154
>AF264752-1|AAF74767.1| 220|Homo sapiens unknown protein.
Length = 220
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +3
Query: 510 VLINRAQESNTERNIEYTTANVMAKSDRDSINEYLKKNGRSMFDITFCFSVSMWIHLNNG 689
V ++ A S N+ + T N + DRD + E +D+ C S++ W+HLN G
Sbjct: 70 VPLDGADTSVFPNNVVFVTGNYVL--DRDDLVEAQTPE----YDVVLCLSLTKWVHLNWG 123
Query: 690 DNGLREFLEHIKTISKS---IIIEPQPWKCY 773
D GL+ I + +++EPQPW Y
Sbjct: 124 DEGLKRMFRRIYRHLRPGGILVLEPQPWSSY 154
>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
domains protein 1 short form protein.
Length = 3389
Score = 31.1 bits (67), Expect = 4.7
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +3
Query: 420 TGDLTRELYKLLKNLYPQCMLHILAVDIDSVLINRAQESNTERNIEYTTANVMAK-SDRD 596
+G +T Y + C+ I D D V+ +E ER + T K D
Sbjct: 420 SGVITSPNYPVQYEDNAHCVWVITTTDPDKVIKLAFEEFELERGYDTLTVGDAGKVGDTR 479
Query: 597 SINEYLKKNGRSMFDITFCFSVSMWIHLNNGDN 695
S+ L G S+ D+ S MW+HL + D+
Sbjct: 480 SVLYVL--TGSSVPDLIVSMSNQMWLHLQSDDS 510
>AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple
domains 1 protein protein.
Length = 3566
Score = 31.1 bits (67), Expect = 4.7
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +3
Query: 420 TGDLTRELYKLLKNLYPQCMLHILAVDIDSVLINRAQESNTERNIEYTTANVMAK-SDRD 596
+G +T Y + C+ I D D V+ +E ER + T K D
Sbjct: 420 SGVITSPNYPVQYEDNAHCVWVITTTDPDKVIKLAFEEFELERGYDTLTVGDAGKVGDTR 479
Query: 597 SINEYLKKNGRSMFDITFCFSVSMWIHLNNGDN 695
S+ L G S+ D+ S MW+HL + D+
Sbjct: 480 SVLYVL--TGSSVPDLIVSMSNQMWLHLQSDDS 510
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,379,882
Number of Sequences: 237096
Number of extensions: 2300569
Number of successful extensions: 3821
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3812
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -