Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_N01
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.74 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   3.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.1  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 492  PGDQRHADGVVGTRPVAVSHERREIQRDAHSWHDSDT 602
            PG Q++  GV   RP    H R   + +  +   SDT
Sbjct: 930  PGSQQNVAGVFNLRPATTYHLRIVAENEIGASDPSDT 966


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 471 IESVDAYPGDQRHADGVVG 527
           I S D  PG Q H  GV G
Sbjct: 528 IRSTDVIPGTQEHVCGVKG 546


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 360 QCLQEPSHPSEEIHSTDLGALQLTPDFKR 274
           QC+    +    +HS   GA+QL    KR
Sbjct: 50  QCISSRRNGRHNVHSLAFGAIQLRQLLKR 78


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 280 KVWSELQSPQVGAVNFFTGMGG 345
           K+  +++ P   AVN  TGMGG
Sbjct: 167 KLLKQIEIPHNIAVNASTGMGG 188


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 502 SVTLTVSSVHDQWPLVMNDGRYNVTLTPGMTVTLPKDGI 618
           SVT  VS  HD   +    GR        +T+TLP  G+
Sbjct: 344 SVTNWVSGNHDNHRVASRFGRQRGDEIVMLTLTLPGIGV 382


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 563 LPSFMTNGHW 534
           LP+F ++GHW
Sbjct: 232 LPNFPSSGHW 241


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,293
Number of Sequences: 438
Number of extensions: 4803
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)