Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_M19
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    29   0.042
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.90 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   6.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 533 LEPSLRSSASIVIACAGQMASQSLQAMHLSSPEG*RRRACSPLNRGDSGP 384
           L P   + A+ + A A   A+Q    + ++SP G  R + SPL    S P
Sbjct: 138 LPPQTAAMAAYLNAAAVAAAAQQSHRLMMTSPSGFNRASVSPLISSSSSP 187


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = -2

Query: 721 MRSHSPIYRRSTEVSPYCTKVPRVSLLKTRNSDLPRLHQPDRLLDRSHN 575
           M+SHS +YR S     Y TK      +  R       H P+ +LD   N
Sbjct: 278 MKSHSNVYRYSCRDCSYATKYCHSLKIHLRRYG----HTPNVVLDEEGN 322


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 721 MRSHSPIYRRSTEVSPYCTK 662
           M+SHS +YR S     Y TK
Sbjct: 36  MKSHSNVYRYSCRDCSYATK 55


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -3

Query: 258 HVLFLCIYIFISRYVLWVNLLN 193
           H+LF C +IF + ++L++  L+
Sbjct: 179 HLLFCCAFIFFNMHLLFLLCLD 200



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 255 VLFLCIYIFISRYVLW-VNLL 196
           ++ LCIY F   ++L+ V+LL
Sbjct: 233 IILLCIYYFYYAFILFTVHLL 253


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 609 CNRGRSEFRVFNRDTRG 659
           CNR R++  + NRDT G
Sbjct: 910 CNRIRNQRWIVNRDTSG 926


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 718 RSHSPIYRRSTEVSPYCTKVPRVSLLKTR 632
           R++ P +R   +  PYC K+  ++  + R
Sbjct: 374 RTNLPTHRHPQDEIPYCGKIFNLTTRQVR 402


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 255 VLFLCIYIFISRYVLWVNLLNISF 184
           V+F+   +  S  ++W++L+ ISF
Sbjct: 258 VIFVICVLVQSEKIVWLHLVYISF 281


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 558 VNIVSSGSPRTVLTLFCFNRDSL 490
           + +  +G P   L  FC N D L
Sbjct: 112 MGLAPTGHPGAALPFFCHNGDPL 134


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 558 VNIVSSGSPRTVLTLFCFNRDSL 490
           + +  +G P   L  FC N D L
Sbjct: 4   MGLAPTGHPGAALPFFCHNGDPL 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,535
Number of Sequences: 336
Number of extensions: 4034
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)