Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_M15
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128682-1|BAC87569.1|  303|Homo sapiens protein ( Homo sapiens ...    31   5.2  

>AK128682-1|BAC87569.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46848 fis, clone UTERU3005422. ).
          Length = 303

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 9/129 (6%)
 Frame = +1

Query: 232 GSPPPPEDSFFYIRYPKSDILFGK-----PTNSQDALVNETKEVTAASAFNVVKEKDWS- 393
           G PPPP D F     P      G      P     A    +K  TA   F   +   WS 
Sbjct: 145 GPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPGMSKPPTAQPDFPYGQYGKWSP 204

Query: 394 --KHTKPCQDVLHGIAPINTAVNSVTKPKPAGTDDGFKGEGAACGTSVV-KVAHQMISSR 564
                +  QD  HG+    ++ +S     PA T    +GEG   G  VV +++ Q+ SSR
Sbjct: 205 AMPRPRWPQDPGHGLP---SSASSPAGRSPAFTWCE-RGEGGEGGVGVVGEISWQLGSSR 260

Query: 565 SPRGFTVAS 591
             RG  VA+
Sbjct: 261 RERGSLVAA 269


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,081,709
Number of Sequences: 237096
Number of extensions: 2781134
Number of successful extensions: 10146
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 9025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10127
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)