Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_M14
         (810 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.5  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   3.3  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   5.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   5.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   5.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   5.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   7.7  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
 Frame = -3

Query: 691 KDGQIEEEIHQESSRSGVSVGA-ADDHIIL-----VVDYAKALLQPSYYLFPNSMSHHRS 530
           +D  IE EI  E S++ VS G+  ++H        V  Y        YY++         
Sbjct: 292 RDSPIEPEI--EISQNSVSTGSDKENHKTEEPNDEVATYDNTPRDFPYYMYSREQYSQSH 349

Query: 529 INRHEDQSFNSVPTV 485
           +  +E++ F + PTV
Sbjct: 350 LISNENRDFQTTPTV 364


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 155 NITNSFAGFYNSHNTKYKVQQ 93
           N  N++  + N++NT YK  Q
Sbjct: 93  NYNNNYNNYNNNYNTNYKKLQ 113


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 238 IHNCFLKFWINNKNKASKRSYNV 306
           IHN   K+  NN N   K  YN+
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNI 112


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 238 IHNCFLKFWINNKNKASKRSYNV 306
           IHN   K+  NN N   K  YN+
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNI 112


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 238 IHNCFLKFWINNKNKASKRSYNV 306
           IHN   K+  NN N   K  YN+
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNI 112


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 238 IHNCFLKFWINNKNKASKRSYNV 306
           IHN   K+  NN N   K  YN+
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNI 112


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 457 LTQVNSMPDLLELSISHKSNFSRWASDVSYASPDTQRI 344
           + Q NS+  +  LS  H  N+S  A +++     TQR+
Sbjct: 663 MDQYNSILMIEHLSPDHNGNYSCVARNLAAEVSHTQRL 700


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 573  RLITSFLTPCPIIAASTDTKTSRLTVSPLLSSITKA 466
            R+ T  L+P P      D  + RLT  P   SI++A
Sbjct: 1371 RVPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRA 1406


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 229 VPLISHFTAKTTFTNRQR 176
           +PL+S F+     +N+QR
Sbjct: 236 IPLVSFFSTSPELSNKQR 253


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,839
Number of Sequences: 438
Number of extensions: 5413
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)