Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_M12
         (824 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    27   0.16 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    27   0.21 
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           25   0.85 
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           25   0.85 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   4.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.9  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 397 DILTQIDR*KLFLLFIFNTSLCHKICNILFQFINSASHFIN 275
           D LT  +  ++F+  IF  S C  +  I++ +    SH +N
Sbjct: 200 DYLTDTNEIRIFVATIFTFSYCIPMILIIYYYSQIVSHVVN 240


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 104 FNMAEPNPDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDK 241
           FN +E   ++ + +TE  YS       N Q+ TQY+     N+Q+K
Sbjct: 369 FNESENRRNSCLGSTETYYSK-----HNTQQFTQYIPESSSNLQEK 409


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 490 RKSRYSLNLKLQFPQTKLPHPKNL 561
           R+ RY+  LK   P+ K P PK+L
Sbjct: 54  RRHRYNFQLKPYNPEHKPPGPKDL 77


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 490 RKSRYSLNLKLQFPQTKLPHPKNL 561
           R+ RY+  LK   P+ K P PK+L
Sbjct: 55  RRHRYNFQLKPYNPEHKPPGPKDL 78


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 157 FIFCVFNNIVRVRFCHIKENKI 92
           FIF  FN++VR R   I+ +K+
Sbjct: 22  FIFLYFNSLVRFRRFTIELDKV 43


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 671 NLQFSFMITVMLLQCIQPV 727
           N+QFS +   ++++C +PV
Sbjct: 700 NVQFSVLYGFVIIECQEPV 718


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 634 FSTTFNFPTFNQQPSVQFYDYSYAVAVYTTSM 729
           +S    FP  N+  S+ +Y Y Y   +    M
Sbjct: 303 YSNGVTFPQRNRFSSLPYYKYKYLNVINALEM 334


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 634 FSTTFNFPTFNQQPSVQFYDYSYAVAVYTTSM 729
           +S    FP  N+  S+ +Y Y Y   +    M
Sbjct: 303 YSNGVTFPQRNRFSSLPYYKYKYLNVINALEM 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,560
Number of Sequences: 438
Number of extensions: 5512
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)