Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_M11
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   2.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   2.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   3.8  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   3.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.6  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 101 MALEASTTEYGCP 139
           + LE +  EYGCP
Sbjct: 183 ICLEGTAREYGCP 195


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 101 MALEASTTEYGCP 139
           + LE +  EYGCP
Sbjct: 183 ICLEGTAREYGCP 195


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 134 CPENAHWTDDP 166
           CP N  W +DP
Sbjct: 518 CPNNYPWVNDP 528


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 345 TFNKITKKDYKSL 307
           TF+  TK DYKSL
Sbjct: 29  TFSDDTKPDYKSL 41


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 148 GIFRASIFGSAGLESHHGDNQEHD 77
           G FR SI  +A  +  +G+N E D
Sbjct: 210 GFFRRSITKNAVYQCKYGNNCEID 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,617
Number of Sequences: 336
Number of extensions: 1455
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)