Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_M04
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.4  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 334 FKNSVNLAVNRTFQYNIYNYDT 399
           F NSV   VN  F  ++  YDT
Sbjct: 70  FDNSVTPMVNHDFTQHLSQYDT 91


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 334 FKNSVNLAVNRTFQYNIYNYDT 399
           F NSV   VN  F  ++  YDT
Sbjct: 70  FDNSVTPMVNHDFTQHLSQYDT 91


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 334 FKNSVNLAVNRTFQYNIYNYDT 399
           F NSV   VN  F  ++  YDT
Sbjct: 70  FDNSVTPMVNHDFTQHLSQYDT 91


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 410 KLIQVS*LYILY*NVLFTAK-LTLFLKQYDIL 318
           K++ +  LY LY +V+  +  L LFL+ Y+++
Sbjct: 212 KILLMIQLYYLYFDVIVISTFLQLFLEHYEVI 243


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 410 KLIQVS*LYILY*NVLFTAK-LTLFLKQYDIL 318
           K++ +  LY LY +V+  +  L LFL+ Y+++
Sbjct: 138 KILLMIQLYYLYFDVIVISTFLQLFLEHYEVI 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,217
Number of Sequences: 336
Number of extensions: 2741
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)