Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_M04
         (726 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0185 - 26201013-26201429,26201537-26201695,26201774-262026...    31   1.2  
03_05_0047 - 20244899-20245203,20245442-20246438,20246561-20247700     28   6.6  

>05_06_0185 -
           26201013-26201429,26201537-26201695,26201774-26202601,
           26203483-26203605
          Length = 508

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
 Frame = +1

Query: 319 KISYCFKNSVNLAVNRTF---QYNIYN---YDTWINLQVXNTIEQ--ILDFTEDSDKLLG 474
           K+ +  KN   + + RTF    YN+ N    D W+N+ +   IE+  +  F E++ K   
Sbjct: 99  KVDHIMKNHSGIGL-RTFGLQSYNLINTYYLDRWLNIAITPAIEELSLTQFPENNTKYYN 157

Query: 475 FPTRV 489
           FP  +
Sbjct: 158 FPCSI 162


>03_05_0047 - 20244899-20245203,20245442-20246438,20246561-20247700
          Length = 813

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 207 STXNEITLTNXIRS*LV*NY*NKNNDGISKDIXVNAN*NII 329
           ST N+ T  + I   +  +  N  N+GIS DI VNA+  ++
Sbjct: 690 STSNQATAGSLIEDCIEISRKNSGNNGISSDILVNASTELV 730


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,363,619
Number of Sequences: 37544
Number of extensions: 258473
Number of successful extensions: 504
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)