Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_M02
(850 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 366 e-102
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 44 3e-05
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 39 0.001
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 38 0.002
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 36 0.010
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 35 0.013
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 33 0.051
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 33 0.068
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 32 0.089
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 31 0.16
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 31 0.21
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 31 0.27
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 31 0.27
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 31 0.27
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 30 0.48
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 30 0.48
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 29 0.63
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 1.1
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 28 1.5
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 28 1.5
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 28 1.9
SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr 3||... 27 3.4
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 4.4
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 27 4.4
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 26 5.9
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 26 5.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 7.8
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 26 7.8
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 26 7.8
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 366 bits (900), Expect = e-102
Identities = 166/251 (66%), Positives = 200/251 (79%), Gaps = 3/251 (1%)
Frame = +3
Query: 105 TDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGIC 284
++ LTRIAIV+ D+C+PK+CRQEC++SCPVVR GKLCIEV P D+IA ISE LCIGCGIC
Sbjct: 2 SESLTRIAIVSEDKCRPKKCRQECRRSCPVVRTGKLCIEVNPTDRIAFISETLCIGCGIC 61
Query: 285 VKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALK 464
VKKCPF AI IIN+P+NLE THRYS NSFKLHRLP PRPG+VLGLVG NGIGKSTALK
Sbjct: 62 VKKCPFGAINIINLPTNLESEVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALK 121
Query: 465 ILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILEDDLKALIKPQYVDQIPKAVK 644
IL+GK KPNLGRY +PPDW E++ +FRGSELQN+FTK++ED++KALIKPQYVD IP+A+K
Sbjct: 122 ILSGKMKPNLGRYDNPPDWAEVVKYFRGSELQNFFTKVVEDNIKALIKPQYVDHIPRAIK 181
Query: 645 ---GTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALSGGELXRFACAMVCIQNGDIF 815
TV L+ + N + DL ++ +RE+ LSGGEL RFA A V Q D++
Sbjct: 182 TGDKTVSGLIKARANNNNFEEVMDHTDLQNLLNREVGHLSGGELQRFAIAAVATQKADVY 241
Query: 816 MFDEPSSYLXV 848
MFDEPSSYL +
Sbjct: 242 MFDEPSSYLDI 252
Score = 58.0 bits (134), Expect = 2e-09
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Frame = +3
Query: 588 DLKALIKPQYVDQIPKAVKGTVGQLLDKKDEM-----KNQSVICXMLDLSHIRDREIAAL 752
DLK +KPQ + PK +GTV L KK K QS +C L + +I D+E+ L
Sbjct: 400 DLKISMKPQTI--APK-FQGTVRMLFLKKIRAAFLNGKFQSEVCKPLSIDNIIDQEVLNL 456
Query: 753 SGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
SGGEL R A + D+++ DEPS+YL
Sbjct: 457 SGGELQRVAICLALGMPADVYLIDEPSAYL 486
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 44.0 bits (99), Expect = 3e-05
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = +3
Query: 366 KNSFKLHRLPIPRP-GEVLGLVGQNGIGKSTALKILAGKQKPNLGR-YTDPPDWQEILAH 539
+N F L + + P GE++ ++G +G GKST + +L P G Y D +EI H
Sbjct: 447 ENLFSLINVSVFIPFGELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEH 506
Query: 540 FRGSELQNYFTKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDL 719
GS + + + D+ I+ + + A + ++ + D
Sbjct: 507 VLGSTITLVCQQPVIFDM--TIRENIIMRNENASESDFEEVC----RLALVDEFALTFDQ 560
Query: 720 SHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
S+ + A+LSGG+ R A A +++ +I + DEP+S L
Sbjct: 561 SYDTPCKEASLSGGQQQRIALARALLRDTEILILDEPTSAL 601
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 38.7 bits (86), Expect = 0.001
Identities = 40/147 (27%), Positives = 62/147 (42%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILED 587
G G+VG NG GKST L+ + + N P E+ F LQ ED
Sbjct: 470 GHRYGVVGHNGCGKSTLLRAIGDYKVENF------PSPDEVKTCFVAHSLQG------ED 517
Query: 588 DLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALSGGEL 767
A++ +V Q KA+ + D + + M ++ +A+LSGG
Sbjct: 518 TSMAIL--DFVAQ-DKALLTMNVTRQEAADALHSVGFTAEM------QENPVASLSGGWK 568
Query: 768 XRFACAMVCIQNGDIFMFDEPSSYLXV 848
+ A +Q DI + DEP+++L V
Sbjct: 569 MKLELARAMLQKADILLLDEPTNHLDV 595
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 417 LGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPD 518
+ ++G NG GKST +K+L G+ P G+ P+
Sbjct: 722 VAILGPNGAGKSTLIKVLIGEVIPQEGKVFKHPN 755
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 741 IAALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
I++LSGG+ + A N + + DEP+++L
Sbjct: 908 ISSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFL 941
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 37.9 bits (84), Expect = 0.002
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Frame = +3
Query: 396 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT-DPPDWQEI-LAHFRGS-ELQNY 566
+ +PG+V+ LVG++G GKST ++IL N G T D D + + L+ R S +
Sbjct: 606 VAQPGKVIALVGESGGGKSTIMRILLRFFDVNSGSITIDDQDIRNVTLSSLRSSIGVVPQ 665
Query: 567 FTKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIA 746
+ + D + IK Y P A + K ++ ++ + S + +R +
Sbjct: 666 DSTLFNDTILYNIK--YAK--PSATNEEI-YAAAKAAQIHDRILQFPDGYNSRVGERGL- 719
Query: 747 ALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
LSGGE R A A +++ I + DE +S L
Sbjct: 720 KLSGGEKQRVAVARAILKDPSIILLDEATSAL 751
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 35.5 bits (78), Expect = 0.010
Identities = 39/142 (27%), Positives = 65/142 (45%)
Frame = +3
Query: 417 LGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILEDDLK 596
+G+VG NG GKST LK+L + P G + P + +A+F + L+ +L
Sbjct: 547 IGVVGPNGAGKSTMLKLLIEQLHPTSGIVSRHPRLR--IAYFA-----QHHVDTLDLNLN 599
Query: 597 ALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALSGGELXRF 776
AL + K G K E + + + + +++ LSGG+ R
Sbjct: 600 AL------SFLAKTFPG--------KGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSRV 645
Query: 777 ACAMVCIQNGDIFMFDEPSSYL 842
A A + +QN I + DEP+++L
Sbjct: 646 AFACLGLQNPHILILDEPTNHL 667
Score = 30.7 bits (66), Expect = 0.27
Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 35/182 (19%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILA--------------------GKQKPNLGRYTDPPDWQE 527
G GL G+NGIGKST L+ L+ G P L D W++
Sbjct: 208 GRRYGLTGRNGIGKSTLLRALSRREIAIPTHITILHVEQEMTGDDTPALQSVLDADVWRK 267
Query: 528 ILAHFRGSELQNYFTKILEDDLKALIKPQYVDQIPKA---------------VKGTVGQL 662
L + ++ N + I E +L+ L K Q DQ ++ + ++
Sbjct: 268 YLIQDQ-EKITNRLSTI-EKELEELSKDQTADQAISRRLERERDELDLRLLDIQNKLSEM 325
Query: 663 LDKKDEMKNQSVICXMLDLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
+ E + +++ + ++ SGG R + A D+ + DEPS+ L
Sbjct: 326 DSDRAESRAATILAGLGFTQEMQSHATKTFSGGWRMRLSLARALFCQPDLLLLDEPSNML 385
Query: 843 XV 848
V
Sbjct: 386 DV 387
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 35.1 bits (77), Expect = 0.013
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3
Query: 390 LPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 497
L +P+ L LVG NG GKST LK+L+GK G
Sbjct: 25 LDLPKGSRTL-LVGANGAGKSTLLKLLSGKSLAKAG 59
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 33.1 bits (72), Expect = 0.051
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 417 LGLVGQNGIGKSTALKILAGKQKPNLG 497
+ ++G NG GKST +K+L G+ P +G
Sbjct: 703 IAVIGPNGAGKSTLIKVLTGELLPTVG 729
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 741 IAALSGGELXRFACAMVCIQNGDIFMFDEPSSYLXV 848
I +LSGG + A +N DI + DEP+++L V
Sbjct: 546 IGSLSGGWKMKLALTRAMFKNPDILLLDEPTNHLDV 581
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 711 LDLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
LD + I LSGG+ + A + + DEP++YL
Sbjct: 891 LDAELVSHSRIKGLSGGQKVKLVLAACTWLRPHVIVLDEPTNYL 934
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 32.7 bits (71), Expect = 0.068
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQKPNLGR-YTDPPDWQEILAHFRGSELQNYFTKILE 584
G++ LVG +G GKST + ++ P G+ + D D L + L+N + + +
Sbjct: 448 GKITALVGASGSGKSTIIGLVERFYDPIGGQVFLDGKD----LRTLNVASLRNQISLVQQ 503
Query: 585 DDL--KALIKPQYVDQIPKAVKGTVG-QLLDKK--DEMKNQSVICXMLDLSHIRDREIA- 746
+ + + +P +KGT+ + L+++ D K + ++ L +
Sbjct: 504 EPVLFATTVFENITYGLPDTIKGTLSKEELERRVYDAAKLANAYDFIMTLPEQFSTNVGQ 563
Query: 747 ---ALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
+SGG+ R A A I + I + DE +S L
Sbjct: 564 RGFLMSGGQKQRIAIARAVISDPKILLLDEATSAL 598
Score = 28.3 bits (60), Expect = 1.5
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEIL--AHFRGSELQNYFTK 575
+PG+ + VG +G GKST + ++ R+ D + ++ + R + +Y +
Sbjct: 1145 KPGQFVAFVGSSGCGKSTTIGLIE--------RFYDCDNGAVLVDGVNVRDYNINDYRKQ 1196
Query: 576 I-LEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSH----IRDRE 740
I L L + + I V + + + K ++ +L L + + ++
Sbjct: 1197 IALVSQEPTLYQGTVRENIVLGASKDVSE-EEMIEACKKANIHEFILGLPNGYNTLCGQK 1255
Query: 741 IAALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
++LSGG+ R A A I+N I + DE +S L
Sbjct: 1256 GSSLSGGQKQRIAIARALIRNPKILLLDEATSAL 1289
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 32.3 bits (70), Expect = 0.089
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Frame = +3
Query: 363 SKNSFKLHRLPIPRPGEVLGLV-GQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAH 539
S F L L I P L +V G G GKS+ + L G+ N G Y P + +++
Sbjct: 625 SPGDFCLRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSLNKGSYNLPR--SKGVSY 682
Query: 540 FRGSELQNYFTKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDL 719
S++ + D++ L Y+++ K V G L D QS + DL
Sbjct: 683 V--SQVPWLRNATIRDNI--LFDYPYIEERYKKVIQACGLLTDL------QSFVAS--DL 730
Query: 720 SHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSSYLXV 848
+ I ++ + LSGG+ R A A I + D+ S L +
Sbjct: 731 TEIGEKGV-TLSGGQKQRIALARAVYSPTSIVLMDDVFSALDI 772
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 31.5 bits (68), Expect = 0.16
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 348 TTHRYSKNS-FKLHRLPIPRPGEVL--GLVGQNGIGKSTALKILAGKQKPNLGRYTDPP 515
T YSK + R + RPG L G+VG IGKST +IL K NLG + P
Sbjct: 22 TRRYYSKQKDISIVRQRLGRPGNHLKIGIVGMPNIGKSTLFQILT---KTNLGNPANYP 77
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 31.1 bits (67), Expect = 0.21
Identities = 42/151 (27%), Positives = 65/151 (43%)
Frame = +3
Query: 396 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTK 575
IPR L +VG G GKST L G+ G+ T P Q I + + L+N
Sbjct: 604 IPRNQFTL-VVGSTGSGKSTLAMALLGELHVISGKMTTPSISQRIAYVPQAAWLRN--GT 660
Query: 576 ILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALS 755
I + L +P ++ + +K LD N DL++I ++LS
Sbjct: 661 IRSNILFG--EPYDEERYFQIIKACC---LDSDLNSMNDG------DLTYIHSNG-SSLS 708
Query: 756 GGELXRFACAMVCIQNGDIFMFDEPSSYLXV 848
GG+ R + A N ++++FD+ S L V
Sbjct: 709 GGQKQRVSLARALYSNAEVYIFDDIFSALDV 739
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 30.7 bits (66), Expect = 0.27
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 345 HTTHRYSKN-SFKLHRLPIP-RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 500
H + +Y ++ SF L+ + I P E +G+VG+ G GKST L +P G+
Sbjct: 1230 HYSAKYREDLSFALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGK 1283
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 30.7 bits (66), Expect = 0.27
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 10/152 (6%)
Frame = +3
Query: 423 LVGQNGIGKSTALKILAGKQKPN---------LGRYTDPPDWQEI-LAHFRGSELQNYFT 572
++G G G++T L+ + G P+ L +D P WQ I L F+ S Q
Sbjct: 35 IIGNTGSGRTTFLRCIQGSFTPSPSTSFSYPFLKGKSDSP-WQAIQLLDFKSSGQQR--A 91
Query: 573 KILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAAL 752
+ + ++ + K + G ++K ++ M LSH+ + L
Sbjct: 92 AYYSERYHSFRDKEHDTTLEKWLLGAYRG--NEKFASQHVQEAASMTQLSHLLPSSLINL 149
Query: 753 SGGELXRFACAMVCIQNGDIFMFDEPSSYLXV 848
S G+ R A +Q + + DEP + L V
Sbjct: 150 SNGQSRRAMLASKLVQRPQLLLLDEPYAGLDV 181
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAG 476
R GE L G NG GK+T L + G
Sbjct: 288 REGERWALTGSNGSGKTTLLAYVVG 312
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 30.7 bits (66), Expect = 0.27
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 417 LGLVGQNGIGKSTALKILAGKQKPNLG 497
+ LVG NG GK+T +K++ K +P+ G
Sbjct: 623 VALVGPNGAGKTTLIKLILEKVQPSTG 649
Score = 27.1 bits (57), Expect = 3.4
Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQKP---NLGRYTDPPDWQEILAHFRGSELQNYFTKI 578
G GL+ NG GKST L +A P +L Y D + I E +
Sbjct: 301 GRRYGLIAPNGSGKSTLLHAIACGLIPTPSSLDFYL--LDREYIPNELTCVEAVLDINEQ 358
Query: 579 LEDDLKALIKPQYVDQIPKAVK-GTVG-QLLDKKDEMKNQSVICXMLDLSHIRDREIAA- 749
L+A+++ D AV+ T+ +L D + E + V + L D IA
Sbjct: 359 ERKHLEAMMEDLLDDPDKNAVELDTIQTRLTDLETENSDHRVYKILRGLQ-FTDEMIAKR 417
Query: 750 ---LSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
LSGG R A A + + M DEP+++L
Sbjct: 418 TNELSGGWRMRIALARILFIKPTLMMLDEPTNHL 451
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 29.9 bits (64), Expect = 0.48
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 405 PGEVLGLVGQNGIGKSTALKILA 473
PG++ L+G++G GK+T L +LA
Sbjct: 910 PGKLTALMGESGAGKTTLLNVLA 932
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 29.9 bits (64), Expect = 0.48
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 750 LSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
+SGGE R A + + ++N +I FDE +S L
Sbjct: 580 ISGGEKQRLAVSRLLLKNPEILFFDEATSAL 610
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 29.5 bits (63), Expect = 0.63
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +3
Query: 417 LGLVGQNGIGKSTALKILAGKQKP---NLGRYT 506
+ +VG+NG GKST L ++ G P N+ RY+
Sbjct: 419 VAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYS 451
Score = 29.1 bits (62), Expect = 0.83
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQ--NYFTKIL 581
G+ GL+G NG GKST L+ +A + Y + D + A S++ +Y +
Sbjct: 101 GQRYGLLGDNGSGKSTFLESVAARDV----EYPEHIDSYLLNAEAEPSDVNAVDYIIQSA 156
Query: 582 ED---DLKALIKP-QYVDQIPKAVKGTVGQLLDKKD----EMKNQSVICXMLDLSHIRDR 737
+D L+A I+ D + + + + LD D E K ++ + + +
Sbjct: 157 KDKVQKLEAEIEELSTADDVDDVLLESKYEELDDMDPSTFEAKAAMILHGLGFTQEMMAK 216
Query: 738 EIAALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
+SGG R A + + + DEP+++L
Sbjct: 217 PTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHL 251
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 1.1
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Frame = +3
Query: 411 EVLGLVGQNGIGKSTALKILAG--KQKP---NLGRYTDPPD----WQEILAHFRGSELQN 563
E L LVG+ G GK+T +++LAG QK N+ + T+ D ++ I A G L
Sbjct: 468 EPLLLVGETGTGKTTTIQLLAGLLGQKVTVINMSQQTESSDMLGGYKPINASTLGLPLHE 527
Query: 564 YFTKILEDDLKALIKPQYV 620
F I E + +++
Sbjct: 528 RFIDIFEQTFSSKKNAKFI 546
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 345 HTTHRYSKN-SFKLHRLPIP-RPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 497
H + RY +N L+ + + +P E +G+VG+ G GKST L +P G
Sbjct: 1228 HYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSG 1280
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 396 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 497
+ R GE+ +VG+ G+GKS+ L+ G + + G
Sbjct: 605 VARRGELCCIVGKVGMGKSSLLEACLGNMQKHSG 638
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/104 (21%), Positives = 43/104 (41%)
Frame = +3
Query: 390 LPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYF 569
LP P +LG + + + LA Q+P+ + D W E H + S ++
Sbjct: 616 LPKEIPIAILGSMRKKAFQLLRSGSELAHGQRPSHPKLKDFSSWGEFEVHVKNSAEEDAE 675
Query: 570 TKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVI 701
++ D L ++ ++ K +L+D KD+ N ++
Sbjct: 676 LALVYDMADELFSESFLSRLDNCEK----RLMDSKDDGDNGIIL 715
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 252 SEELCIGCGICVKKCPFDAITI 317
+EEL +G G C+ PFD +T+
Sbjct: 239 NEELLMGYGFCLPDNPFDTVTL 260
>SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr
3|||Manual
Length = 264
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 209 FSHTYNRTTLLTFLPTSLWLAAISIHNSDTS*LVGF 102
F Y R ++ +LP ++W+ IS+H S L+ F
Sbjct: 129 FLLAYLRISIDRYLPIAIWIGLISLHPKLRSYLIQF 164
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 366 KNSFKLHRLPIPRP-GEVLGLVGQNGIGKSTALKILAGKQK 485
KN++ + P P G+ LG++G GIGK+ A + A K
Sbjct: 141 KNNWNANCKPSHDPEGKTLGILGLGGIGKTMAKRARAFDMK 181
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 390 LPIPRPGEVLGLVGQNGIGKSTALKILAGKQK 485
LP + GLVG +GKS+ + L G +K
Sbjct: 295 LPDGKTKMTFGLVGYPNVGKSSTINALVGSKK 326
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 285 VKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTAL 461
+ K D TI IP+N H H++ +S ++ ++ + R V G +G S A+
Sbjct: 269 IAKAKIDT-TIAVIPANAFHHLVHKFPNSSAQIVQVILTRFQRVTFSTGYEYLGLSDAI 326
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 298 PLMLSPSSISHLTWRNTLPTVTPKTHSSSI 387
PL L PSS+ R T +TPK ++S+I
Sbjct: 142 PLKLIPSSLCGRLLRTTEVLITPKPNTSAI 171
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 396 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPD 518
+P PG+ L+ Q G + K KP GR D D
Sbjct: 1743 VPNPGDRSALLQQIHTGTRLKKTVTTDKSKPIAGRVLDASD 1783
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKIL 470
G+ +G++G IGKS A KIL
Sbjct: 159 GKRVGIIGMGAIGKSFAQKIL 179
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 417 LGLVGQNGIGKSTALKILA 473
+ L+G NG+GKST L +A
Sbjct: 345 ISLIGVNGVGKSTTLAKIA 363
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,642,133
Number of Sequences: 5004
Number of extensions: 77782
Number of successful extensions: 301
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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