Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_M02
(850 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 388 e-108
SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37) 41 0.001
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 41 0.001
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.014
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 37 0.018
SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06) 36 0.055
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.096
SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.096
SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24) 34 0.13
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.13
SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11) 34 0.17
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 34 0.17
SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09) 33 0.22
SB_53172| Best HMM Match : ABC_tran (HMM E-Value=5.4e-40) 33 0.29
SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.39
SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44) 32 0.51
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0) 32 0.68
SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 32 0.68
SB_14067| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41) 31 1.2
SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4) 31 1.6
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 31 1.6
SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_46572| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 31 1.6
SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24) 30 2.1
SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 30 2.1
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 30 2.1
SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41) 30 2.7
SB_52472| Best HMM Match : ABC_tran (HMM E-Value=4.62428e-44) 30 2.7
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_58935| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05) 29 4.8
SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_58362| Best HMM Match : Fer4 (HMM E-Value=0.00099) 29 4.8
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.8
SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021) 29 6.3
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 29 6.3
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 29 6.3
SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061) 29 6.3
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 29 6.3
SB_39906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 28 8.3
SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21) 28 8.3
SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14) 28 8.3
SB_7019| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41) 28 8.3
SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24) 28 8.3
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 388 bits (956), Expect = e-108
Identities = 182/247 (73%), Positives = 204/247 (82%)
Frame = +3
Query: 78 MSRRKDHEETDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISE 257
M+ R D +KLTRIAIV+ D+CKPKRCRQECKKSCPVVRMGKLCIEVTP K+A ISE
Sbjct: 1 MAFRADQSTQEKLTRIAIVSTDKCKPKRCRQECKKSCPVVRMGKLCIEVTPETKLAAISE 60
Query: 258 ELCIGCGICVKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQN 437
LCIGCGIC KKCPF+AITIIN+PSNLEK TTHRY NSFKLHRLPIPRPGEVLGLVG N
Sbjct: 61 PLCIGCGICAKKCPFEAITIINLPSNLEKDTTHRYGPNSFKLHRLPIPRPGEVLGLVGTN 120
Query: 438 GIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILEDDLKALIKPQY 617
GIGKSTALKILAGKQKPNLGR+ PPDWQEIL HFRGSELQNYFTKILEDDLKA+IKPQY
Sbjct: 121 GIGKSTALKILAGKQKPNLGRHDTPPDWQEILQHFRGSELQNYFTKILEDDLKAIIKPQY 180
Query: 618 VDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALSGGELXRFACAMVCI 797
VDQIPKAVK + G L + ++ DL+ + +R + LSGGEL RFACA+VCI
Sbjct: 181 VDQIPKAVKVSEGMLYSIS---RVTTIRAVAGDLTAVMERNVDELSGGELQRFACAVVCI 237
Query: 798 QNGDIFM 818
Q+ D+++
Sbjct: 238 QSADVYI 244
Score = 36.7 bits (81), Expect = 0.024
Identities = 29/120 (24%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Frame = +3
Query: 411 EVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDW----QEILAHFRGSELQNYFTKI 578
E++ ++G+NG GK+T +++LAGK P+ + Q+I +G+ Q TKI
Sbjct: 346 EIIVMLGENGTGKTTFIRMLAGKLSPDNDEEVPMLNVSYKPQKISPKSQGTVRQLLHTKI 405
Query: 579 LEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALSG 758
+ + I PQ++ + K ++ + Q++D++ M + + + ++ ++ LSG
Sbjct: 406 RD----SYIHPQFIADVIKPLQ--IEQIMDQEVLMTYIFHLLVIASIPYVLVLQVLNLSG 459
>SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 46.0 bits (104), Expect = 4e-05
Identities = 38/147 (25%), Positives = 69/147 (46%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKIL 581
+ GE++G++G +G GKST + +LAG + + L FR ++ Y I+
Sbjct: 150 KSGELVGVLGPSGAGKSTLINVLAGYRTKFADGSIKVNGVERNLRQFR--KMSCY---IM 204
Query: 582 EDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALSGG 761
+DD+ L ++ + + + + + D+ + I L L D ++ +SGG
Sbjct: 205 QDDV-LLPHLTVMESMMVSANLHLKENMPLDDKERLIKEILINLGLLETADTRLSEVSGG 263
Query: 762 ELXRFACAMVCIQNGDIFMFDEPSSYL 842
+ R A A+ I N + DEP+S L
Sbjct: 264 QRKRVAIALELINNPPLIFLDEPTSGL 290
>SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37)
Length = 226
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/146 (25%), Positives = 65/146 (44%)
Frame = +3
Query: 411 EVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILEDD 590
E++GLVG+NG GK+T L+ L G+ P G I HF + + TK++
Sbjct: 2 EIIGLVGENGNGKTTLLRSLCGELNPTSG---------TIKYHFDYEDGYDLKTKLVYIP 52
Query: 591 LKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALSGGELX 770
+ + + + G L ++ + + + +I L L R+ + LS G
Sbjct: 53 QRTDTWRGSMYENLEFTASCYGYLPEENNLVID--LIITRLGLRKFRNHNWSGLSSGYKM 110
Query: 771 RFACAMVCIQNGDIFMFDEPSSYLXV 848
RF A + ++ I + DEP + L +
Sbjct: 111 RFELARMLLRKPKILLIDEPLANLDI 136
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 40.7 bits (91), Expect = 0.001
Identities = 38/143 (26%), Positives = 58/143 (40%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILED 587
G++ L+G NG GK+T + IL G P G + D + IL G
Sbjct: 227 GQITALLGHNGAGKTTTMSILTGLFTPTSG--SAMIDNKSILTDIDGIRESLGLCPQHNV 284
Query: 588 DLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALSGGEL 767
L ++++ +KG GQ KDE+ +LD + E LSGG
Sbjct: 285 LFDRLTVEEHLEFFIN-LKGKYGQA--AKDEVLQMITDLQLLDKRKAKSSE---LSGGMK 338
Query: 768 XRFACAMVCIQNGDIFMFDEPSS 836
+ CA+ + + DEP+S
Sbjct: 339 RKLNCAIALVGGSETVFLDEPTS 361
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 497
RPGE+L L+G +G GK+T L +LAG+ + G
Sbjct: 33 RPGEMLALMGPSGSGKTTLLNVLAGRMAKDAG 64
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 37.5 bits (83), Expect = 0.014
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Frame = +3
Query: 615 YVDQIPKAVKGTVGQ--LLDKK-DEMKNQSVI--CXML---------DLSHIRDREIAAL 752
+VDQIP GT+ + L K+ DE K + VI C + DLS I R ++ L
Sbjct: 546 FVDQIPWVFSGTLRENILFGKEYDEAKYKKVIKVCSLEEDVRRLPKGDLSMIGQRGVS-L 604
Query: 753 SGGELXRFACAMVCIQNGDIFMFDEPSS 836
SGG+ R + A + DIF+ D+P S
Sbjct: 605 SGGQRSRVSLARAVYSDADIFLMDDPLS 632
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 37.1 bits (82), Expect = 0.018
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 2/149 (1%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKIL 581
R G+ + LVG++G GKST +K++ P G T D +I + L+ + +
Sbjct: 143 RSGQTVALVGESGCGKSTLIKLVQRFYDPAEG--TVCMDGIDIRS-LNLKWLRQHIGVVS 199
Query: 582 EDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSH--IRDREIAALS 755
++ + L + I +G ++K +M N L + + A +S
Sbjct: 200 QEPI--LFATTVAENIRYGREGITQAEIEKATKMANAHDFIRNLPQGYNTVVGERGAQMS 257
Query: 756 GGELXRFACAMVCIQNGDIFMFDEPSSYL 842
GG+ R A A ++N + + DE +S L
Sbjct: 258 GGQKQRIAIARALVKNPTLLILDEATSAL 286
>SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 36.7 bits (81), Expect = 0.024
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Frame = +3
Query: 405 PGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILE 584
PGEV+ L+G +G GKST L+ + ++PN G H G E + I +
Sbjct: 46 PGEVVCLIGPSGSGKSTLLRCVNLLEQPNEG-----------TIHVGGFEATDPDVDIDK 94
Query: 585 DDLKALIKPQYVDQIPKAV---KGTVGQL-LDKKDEMKNQSVICXMLDLSHI---RDREI 743
K + Q + P T+G + + K + +++ L+ HI D+
Sbjct: 95 MRRKVGMVFQQFNLFPHLTVLENLTIGPIRVRKMGKAAAEALARNYLERVHIPEQADKYP 154
Query: 744 AALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
+ LSGG+ R A A + +FDEP+S L
Sbjct: 155 SQLSGGQQQRVAIARALCMDPIAMLFDEPTSAL 187
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 36.3 bits (80), Expect = 0.031
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Frame = +3
Query: 576 ILEDDLKALIKPQYVDQIPKAVKGTVGQ--LLDKK-DEMKNQSVI--CXM-LDLSHIRDR 737
+ + DL + YV Q P GTV + L KK + K Q V+ C + DL+ DR
Sbjct: 467 VRKGDLSVNGRAVYVPQCPWVYSGTVRENVLFGKKYQQWKYQVVVRACDLEKDLNEFPDR 526
Query: 738 EIAA-------LSGGELXRFACAMVCIQNGDIFMFDEPSS 836
++ LSGG+ R A + DI++ D+P S
Sbjct: 527 DLTTIGEHGVLLSGGQRTRIGLARALYADADIYLLDDPLS 566
>SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06)
Length = 240
Score = 35.5 bits (78), Expect = 0.055
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 336 LEKHTTHRYSKNSFKLHRLPIP-RPGEVLGLVGQNGIGKSTALKILAG 476
L+ H+Y S L L + GEV L+G+NG+GK+T LK L G
Sbjct: 84 LQVQQLHQYYGGSHILRGLSFDVKVGEVTCLLGRNGVGKTTLLKCLMG 131
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.7 bits (76), Expect = 0.096
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 153 PKRCRQECKKSCPVVRMGKLCIEVT-PNDKIATISEELCIGCGICVKKCPFDAITIINIP 329
PK C QECK CPV K C T P+ K + E I C+ CP ++ +P
Sbjct: 2182 PKICAQECKPYCPV----KCCESSTAPSTKEYSTDECPEICSHNCLPFCPVKCCAVV-VP 2236
Query: 330 SNLEKHTTH 356
SN + TH
Sbjct: 2237 SN-QAEATH 2244
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +3
Query: 153 PKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKC 296
PK C C CPV+ C +P + TI CI C +KC
Sbjct: 1800 PKSCETTCTPDCPVM----CCKNSSPATECPTICASKCI--SKCPEKC 1841
>SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 34.7 bits (76), Expect = 0.096
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Frame = +3
Query: 405 PGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILE 584
PG+V+ LVG +G GKST + +L +P G + L H+ L N + + +
Sbjct: 379 PGQVVALVGPSGGGKSTCINLLEHLYEPTGGEVLIDAVPVKDLDHY---YLHNKVSLVGQ 435
Query: 585 DDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVIC----XMLDLSHIRDREIA-- 746
+ + + I K + V L D + +++ S + + + D E
Sbjct: 436 EPV------LFARSIKKNIAYGVEDLADNPETVEHVSRLANAHSFVSGMPKGYDTETGEK 489
Query: 747 --ALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
LSGG+ R A A I+N I + DE +S L
Sbjct: 490 GLQLSGGQKQRIAIARALIRNPKILLLDEATSAL 523
>SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24)
Length = 169
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 351 THRYSKNSFKLHRLPIPR--PGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQ 524
T RY ++ L+ R PGE +GLVG +G GK+T +K++ N GR D Q
Sbjct: 72 TFRYGRHEAPLYDRFSARIAPGERVGLVGHSGSGKTTFIKLIQRLYDVNGGRIA--IDGQ 129
Query: 525 EILAHFRGSELQNYFTKILED 587
+I A R + L++ + ++
Sbjct: 130 DI-AQVRQASLRSQIAIVQQE 149
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
DLS I +R IA LSGG+ R + A + DI++ D+P S L
Sbjct: 894 DLSEIGERGIA-LSGGQRARVSLARALYLDADIYVLDDPLSAL 935
>SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11)
Length = 406
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
DLS I +R +A LSGG+ R + A + DI++ D+P S L
Sbjct: 186 DLSEIGERGVA-LSGGQRARVSLARALYLDADIYVLDDPLSAL 227
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 33.9 bits (74), Expect = 0.17
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 6/180 (3%)
Frame = +3
Query: 321 NIPSNLEKHTTHRY--SKNSFK-LHRLPIP-RPGEVLGLVGQNGIGKSTALKILAGKQKP 488
N+ ++ + H Y S+N K L+ L + R G+ + LVG++G GKST +K++
Sbjct: 647 NVTGDVTFNDIHFYYPSRNEVKVLNGLSLTVRSGQTVALVGESGCGKSTVIKLIQ----- 701
Query: 489 NLGRYTDPPDWQEILAHFRGSELQNYFTKILEDDLKALIKPQYVDQIPKAVKGTVGQLLD 668
R+ DP + I G Q AL + I G ++
Sbjct: 702 ---RFYDPENGSRI-----GVVSQE----------PALFATTIAENIRYGQDGVTQAEIE 743
Query: 669 KKDEMKNQSVICXMLDLSH--IRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
+ +M N L + + + + LSGG+ R A A ++N I + DE +S L
Sbjct: 744 QAAKMANAHDFITKLPKGYETVVGEQGSQLSGGQKQRVAIARALVRNPRILILDEATSAL 803
>SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09)
Length = 562
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 405 PGEVLGLVGQNGIGKSTALKIL 470
PGEV GL+G NG GK+T L ++
Sbjct: 318 PGEVFGLLGPNGAGKTTTLNMM 339
>SB_53172| Best HMM Match : ABC_tran (HMM E-Value=5.4e-40)
Length = 665
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
DLS I +R IA +SGG+ R + A + DI++ D+P S
Sbjct: 302 DLSEIGERGIA-MSGGQRARVSLARAVYLDADIYLLDDPLS 341
>SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1116
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
DLS I +R IA +SGG+ R + A + DI++ D+P S
Sbjct: 434 DLSEIGERGIA-MSGGQRARVSLARAVYLDADIYLLDDPLS 473
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
DLS I R ++ LSGG+ R + A DIF+ D+P S
Sbjct: 543 DLSMIGQRGVS-LSGGQRSRLSLARAVYSGADIFLLDDPLS 582
>SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44)
Length = 945
Score = 32.3 bits (70), Expect = 0.51
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQKPNLG 497
G+++ +G NG GK+T + IL G P G
Sbjct: 528 GQIMSFLGHNGAGKTTTMSILTGLFPPTAG 557
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 32.3 bits (70), Expect = 0.51
Identities = 33/142 (23%), Positives = 63/142 (44%)
Frame = +3
Query: 417 LGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILEDDLK 596
+ +VG NG GK+T LKIL G+ +P G + H+ + YF++ D L+
Sbjct: 367 IAVVGDNGSGKTTLLKILLGELEPVKG-----------IRHYHRNLKIGYFSQHHVDQLQ 415
Query: 597 ALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAALSGGELXRF 776
+ ++ + G + + ++ V + R I +LSGG+ R
Sbjct: 416 --MTQCAIEFLASRFPGMNTEAY--RHQLGRYGV------SGELATRPIISLSGGQKSRV 465
Query: 777 ACAMVCIQNGDIFMFDEPSSYL 842
A + + ++ + DEP+++L
Sbjct: 466 VFASMTMGGPNLLVLDEPTNHL 487
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQ 482
G GLVG+NGIGK+T L+ L+ ++
Sbjct: 232 GRRYGLVGRNGIGKTTLLRTLSKRE 256
>SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 884
Score = 31.9 bits (69), Expect = 0.68
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQKPNLG 497
G++ L+G NG GKST + L G +P+ G
Sbjct: 522 GQITALLGHNGAGKSTLIGALTGMIQPSSG 551
>SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 781
Score = 31.9 bits (69), Expect = 0.68
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAGKQKPNL--------GRYTDPPDWQEILAHFRGSEL 557
+ GEV ++G +G GK+T L L+GK G+ D D + F E
Sbjct: 221 KSGEVTAVMGPSGAGKTTFLNTLSGKAYYGTRGGEIFINGKKEDDLDMYRTITGFVPQED 280
Query: 558 QNYFTKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDR 737
+ +++ L+ + + + KA+ K+E +Q I +L+L I+D
Sbjct: 281 VMHRNLTVKEVLRYQAELRLSSIVKKAM----------KEERIHQ--IIELLELERIQDS 328
Query: 738 EIA-----ALSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
+I +SGG+ R M + + + DEP+S L
Sbjct: 329 QIGDETNRGISGGQRKRVNIGMELVVDPTLLFLDEPTSGL 368
>SB_14067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 417 LGLVGQNGIGKSTALKILAGKQKPNLG 497
+ LVG NG GKST LK++ G P G
Sbjct: 89 VALVGPNGAGKSTLLKLIEGLLSPTEG 115
>SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAGK 479
R GEV ++G +G GK+T L L+GK
Sbjct: 162 RAGEVTAIMGPSGAGKTTLLNTLSGK 187
>SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41)
Length = 336
Score = 31.1 bits (67), Expect = 1.2
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Frame = +3
Query: 405 PGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT-DPPDWQEI----LAHFRGSELQNYF 569
PG+ L LVG +G GKST +++L G + D D ++ L G Q+
Sbjct: 167 PGQTLALVGNSGGGKSTIIRLLYRFYDVGSGCISIDGQDISKVTSKSLRQVIGVVPQD-- 224
Query: 570 TKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICXMLDLSHIRDREIAA 749
T + +D++ ++ ++ AV+ Q D + N+ + S + +R +
Sbjct: 225 TVLFNNDIRFNVRYGRLEADDAAVE-EAAQAAD----IHNRILTFPEGYNSLVGERGL-K 278
Query: 750 LSGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
LSGGE R A A ++N + + DE +S L
Sbjct: 279 LSGGEKQRVAIARTVLKNPPVVLLDEATSAL 309
>SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4)
Length = 235
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +3
Query: 183 SCPVVRMGKLCIEVT---PNDKIATISEELCIGCGICVKKCPFDAITIINIPSNLEKHTT 353
+C ++ + + I V P + +S + + V C ++++ + NL+ T
Sbjct: 124 TCSLIDLSLVAISVNLDVPTCSLIDVSL-FALSVNLNVPTCSLIDLSLVALSINLDVPTC 182
Query: 354 HRYSKNSFKLH-RLPIPRPGEVLGLVGQNGIGKSTALKILAGK 479
+ L L +P G ++ +VGQ G GKST L L G+
Sbjct: 183 SLIDLSLVALSINLDVPA-GSLVAVVGQVGCGKSTLLSALLGE 224
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
DLS I R ++ LSGG+ R + A + DI++ D+P S
Sbjct: 571 DLSCIGQRGVS-LSGGQRARVSLARAVYADADIYLLDDPLS 610
>SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILA 473
+PG +L ++G +G GKST + +LA
Sbjct: 218 KPGSLLAIMGASGAGKSTLMNVLA 241
>SB_46572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 75 EMSRRKDHE-ETDKLTRIAIVNADRCKPKRCRQECKKSCPVVRM 203
EM + K H E + RI +V+++ P+ CR EC ++ M
Sbjct: 372 EMQKEKSHLLEVPDVGRINLVSSNSSSPRSCRSECSTPAELLAM 415
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQKPNLG 497
G++ L+G NG GK+T + +L G P G
Sbjct: 335 GQITALLGHNGAGKTTLMSMLTGLFPPTSG 364
>SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24)
Length = 569
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
D++ + +R +A LSGG+ R A + DI++ D+P S
Sbjct: 241 DMTLVGERGVA-LSGGQKARVTLARAVYSDADIYLLDDPLS 280
>SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 674
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 747 ALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
+LSGG+ R + A +GDI++ D+P S
Sbjct: 474 SLSGGQRARISLARAVYADGDIYLLDDPLS 503
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 747 ALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
+LSGG+ R + A +GDI++ D+P S
Sbjct: 143 SLSGGQRARISLARAVYADGDIYLLDDPLS 172
>SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 744 AALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
A+LSGG+ R A +GDI++ D+P S
Sbjct: 195 ASLSGGQKARVNLARAVYADGDIYLLDDPLS 225
>SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41)
Length = 1515
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Frame = +3
Query: 615 YVDQIPKAVKGTVGQLLDKKDEMKNQSV-----ICXML---------DLSHIRDREIAAL 752
YV QIP GT+ + + +M+ + +C ++ DL+ I +R A+L
Sbjct: 634 YVPQIPWISSGTIRENITFGKQMEEERYNKVLEVCSLVSDLSLFPRGDLTVIGERG-ASL 692
Query: 753 SGGELXRFACAMVCIQNGDIFMFDEPSSYL 842
SGG+ R + A + +I++ D+P S L
Sbjct: 693 SGGQQSRVSLARAVYADVEIYLLDDPFSSL 722
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKIL 470
RPGE +G+VG+ G GKS+ L
Sbjct: 1360 RPGERVGIVGKTGAGKSSVFAAL 1382
>SB_52472| Best HMM Match : ABC_tran (HMM E-Value=4.62428e-44)
Length = 322
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPP 515
+PG L + G NG GKS+ +IL+G G PP
Sbjct: 91 QPGMHLLITGPNGCGKSSLFRILSGLWPVYKGYLAKPP 128
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 381 LHRLPIPRP-GEVLGLVGQNGIGKSTALKILAGKQKPNLG 497
LH + + P G ++ +VGQ G GKST L L G+ + G
Sbjct: 564 LHNINLNIPDGSLVAVVGQVGCGKSTLLSALLGETEKVTG 603
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKST 455
+PGE +G+VG+ G GKST
Sbjct: 1357 QPGEKIGIVGRTGAGKST 1374
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
D++ I +R I LSGG+ R A N D+++ D+P S
Sbjct: 660 DMTEIGERGIN-LSGGQKQRVNLARAVYFNADVYLLDDPLS 699
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 390 LPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 500
L IP G ++ +VGQ G GKST L L G+ + G+
Sbjct: 298 LNIPE-GSLVAVVGQVGCGKSTLLSALLGETEKTKGQ 333
>SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4085
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = +3
Query: 405 PGEVLGLVGQNGIGKSTALKILAGKQ-----KPNLGR-YTDPPDWQEILAHFRGSELQNY 566
PG + LVG G GK T +++ A Q KP + R Y W++I + + ++
Sbjct: 2175 PGSHMMLVGVGGTGKVTVVRLAAFIQDCRFIKPQVSRVYQRAEFWEDIKKAYFNAGIKGE 2234
Query: 567 FTKILEDDLKALIKPQYVDQIPKAVK-GTVGQLLDKKD 677
T + D ++ K +++ + + G V + D +D
Sbjct: 2235 STVLFLTD--SVAKDMFLEDVSSILSTGEVPNMFDHED 2270
>SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 405 PGEVLGLVGQNGIGKSTALKILAGKQKPNLG 497
PGE + LVG +G GKST + ++ P G
Sbjct: 185 PGETVALVGPSGGGKSTVISLIERFYDPMTG 215
>SB_58935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 345 HTTHRYSKNSFKLHRLP-IPRPGEVLGLVGQNGIGKSTAL 461
+ T R+ N L L + RP V+G +G +GKST L
Sbjct: 36 YATERFITNDDALKELSKLSRPVRVIGAIGDARVGKSTTL 75
>SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05)
Length = 284
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 405 PGEVLGLVGQNGIGKSTALKILA 473
PG +L ++G +G GKST + +LA
Sbjct: 142 PGTLLAVMGASGAGKSTLMNVLA 164
>SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAGK 479
+ GEV ++G +G GK+T L L+GK
Sbjct: 339 KSGEVTAVMGPSGAGKTTFLNTLSGK 364
>SB_58362| Best HMM Match : Fer4 (HMM E-Value=0.00099)
Length = 116
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 240 IATISEELCIGCGICVKKC 296
+A I EE+CI CG C C
Sbjct: 72 VALIDEEMCINCGKCYMTC 90
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
DLS I R + LS G+ R + A + DIF+ D+P S
Sbjct: 513 DLSMIGQRGVT-LSRGQRSRVSLARAVYSDADIFLLDDPLS 552
>SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021)
Length = 127
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGK 479
GEV ++G +G GK+T L L+GK
Sbjct: 17 GEVTAVMGPSGAGKTTFLNTLSGK 40
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 821 KHKYIPILNAHHGTCKTXQLSSGKCRNFTIT 729
+H + + N H GTC++ G C+ T T
Sbjct: 260 RHNWTHVPNCHTGTCQSNPCGRGLCKELTRT 290
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSS 836
DLS I R I+ LSGG+ R + A + D+ + D+P S
Sbjct: 672 DLSVIGQRGIS-LSGGQRSRVSLARAVYSDCDVLLLDDPLS 711
>SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061)
Length = 152
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 405 PGEVLGLVGQNGIGKSTALKILA 473
PGE++ ++G +G GK+T + +LA
Sbjct: 47 PGELVAVMGASGSGKTTLINVLA 69
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 714 DLSHIRDREIAALSGGELXRFACAMVCIQNGDIFMFDEPSSYLXV 848
DL+ I +R +A LSGG+ R + A + +I++ D+ S L V
Sbjct: 523 DLTVIGERGVA-LSGGQRARVSLARAVYADAEIYLIDDTLSALDV 566
>SB_39906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = -3
Query: 569 EVILQLRAPEMSKYLLPIWRVSVTTQVGLLLASKN--LQCSRLSYTVLAN-KT*NFSWSW 399
E++ LR P + ++ LP+ +V +T ++ + K CS+ + +LA+ +W+
Sbjct: 52 EIVKILRTPLVHRFGLPVQQVIITCRLHIACNPKKKVSYCSQYCFLLLASAHGVALAWAH 111
Query: 398 DRQAMELE*VFGVTV 354
+A+EL +F V
Sbjct: 112 VDEALELYCIFSALV 126
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 33 ECRQYFASVRLLLTEMSRRKDHEETDKLTRIAIVNADRCKPKRCRQECKKS 185
E +YFA R+L+T R + H K+T + + P RCR EC S
Sbjct: 320 EKHRYFALKRVLVT--GRCECHGHAQKVT---FIKGNSSSPGRCRCECDPS 365
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 381 LHRLP-IPRPGEVLGLVGQNGIGKSTALKILAGKQKP 488
LH + + +P E +G+VG+ G GKS+ L L +P
Sbjct: 52 LHNVTCVIKPSEKVGVVGRTGAGKSSLLSTLFRLAEP 88
>SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21)
Length = 1033
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 402 RPGEVLGLVGQNGIGKSTALKILAGKQKP 488
+P E +G+VG+ G GKS+ L L +P
Sbjct: 900 KPAEKVGIVGRTGAGKSSLLATLFRMAEP 928
>SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14)
Length = 441
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKILAGKQKP 488
G GL+G NG GKST L + ++ P
Sbjct: 81 GRKYGLIGLNGCGKSTMLTAIGKREIP 107
>SB_7019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 458 CSRLSYTVLANKT*NFSWSWDRQ 390
C RLS T A+ + N SW W R+
Sbjct: 280 CRRLSSTPFASASSNHSWGWQRK 302
>SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41)
Length = 474
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 408 GEVLGLVGQNGIGKSTALKIL 470
GE +G+VG+NG GKS+ + L
Sbjct: 93 GEKIGIVGRNGSGKSSVIHAL 113
>SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24)
Length = 453
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 147 CKPKRCRQECKKSC--PVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKCPF 302
C+ K ECKK C P V + C + K + + E+C C K CP+
Sbjct: 55 CQNKCTHSECKKKCGEPCVPCAEPCAWKCRHYKCSKLCGEIC-DRPRCDKPCPY 107
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,796,180
Number of Sequences: 59808
Number of extensions: 613976
Number of successful extensions: 2134
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2130
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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