Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L23
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.0  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 79  PCGYEIRSDAVVSLGHFHIPIDLLTITSRRSENRSFSA 192
           PC Y      V+SLG F + + L T      E+ S ++
Sbjct: 33  PCVYLTSFSVVLSLGSFIVSVYLTTKIDNDGESISLAS 70


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 497 PAELLARASRQTLALAEGEPCGSRGAAVIIDVAGRR 604
           PA+L  +    TL   +GEP        II  +G R
Sbjct: 357 PAQLTIQGHDLTLIATDGEPVHPVRVNTIISFSGER 392


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 497 PAELLARASRQTLALAEGEPCGSRGAAVIIDVAGRR 604
           PA+L  +    TL   +GEP        II  +G R
Sbjct: 357 PAQLTIQGHDLTLIATDGEPVHPVRVNTIISFSGER 392


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 445 TTSGQRSQRARHRGGLSAGGAAREGVAADP 534
           TT   ++ +    G  S G   +EG+  DP
Sbjct: 423 TTQKPQTTKTPESGNESDGVCTKEGIVRDP 452


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,931
Number of Sequences: 336
Number of extensions: 2744
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)