Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L23
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    26   1.1  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.3  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   5.8  

>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 685 DESVAAILKKFNARRHHHHXPP 750
           +  +AA LK      HHHH PP
Sbjct: 271 EAQLAAALKLKTLGHHHHHLPP 292


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +1

Query: 469 RARHRGGLSAGGAAREGVAADPRASGGR 552
           R R RGG   GG    G   D    GGR
Sbjct: 81  RGRGRGGRDGGGGFGGGGYGDRNGDGGR 108


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse
          transcriptase protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 94 SRNHRASSLALGSLYDPP 41
          +R HRA  L L  +Y PP
Sbjct: 45 AREHRADVLLLSDIYRPP 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,675
Number of Sequences: 2352
Number of extensions: 11295
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)