Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_L22
(856 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 5e-39
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 116 2e-26
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 42 6e-04
SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05) 30 2.8
SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17) 29 6.4
SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 28 8.4
SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21) 28 8.4
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_27146| Best HMM Match : LIM (HMM E-Value=9.7) 28 8.4
SB_21674| Best HMM Match : LIM (HMM E-Value=0.44) 28 8.4
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 158 bits (384), Expect = 5e-39
Identities = 88/243 (36%), Positives = 130/243 (53%), Gaps = 2/243 (0%)
Frame = +3
Query: 132 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 311
+V+IA AVRTP+ V A+ RA I ++ EV +G V +A G
Sbjct: 9 DVIIACAVRTPVGSHNGDLSSLKAHELGSIVVKEALCRASISPCDVSEVILGQVLTAGQG 68
Query: 312 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 491
Q PARQA I AG+P VN +C SG+K++ L Q + G +I++AGG ESMS P
Sbjct: 69 QGPARQAAIHAGIPACVPAYGVNMLCGSGLKAVALGYQAVAMGDSNIVVAGGQESMSQAP 128
Query: 492 FYL-KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSY 668
R +G M L+D ++ DGL D +N +HMG AEN AK+ +++R++QD +A+ S
Sbjct: 129 HCCHMRPALKFGDMTLIDTMLKDGLMDSFNNYHMGITAENVAKQWEVSREEQDNFALTSQ 188
Query: 669 KRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXEXYKXVNFEKFTKLSTVFQKE-NGTV 845
+R+ A +A F DE+V V + + G + ++ E KL F + GTV
Sbjct: 189 QRTETAQKAGYFSDEIVTVSIKTRAGLTEVNSDQFPRHGCTIEGLRKLKPCFLFDGKGTV 248
Query: 846 TAG 854
+AG
Sbjct: 249 SAG 251
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 116 bits (279), Expect = 2e-26
Identities = 53/88 (60%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +3
Query: 591 GNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAE 767
G CAEN A K ITR++QD+YA++SY+R+AAA++A F E+VPV +PQK+G P ++F E
Sbjct: 59 GVCAENAASKYNITREEQDDYAIHSYRRTAAAWDAGKFKQEVVPVNIPQKKGKPDIVFEE 118
Query: 768 XEXYKXVNFEKFTKLSTVFQKENGTVTA 851
E YK V+FEKF L TVF+KENGTVTA
Sbjct: 119 DEEYKKVSFEKFPSLKTVFKKENGTVTA 146
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 11/60 (18%)
Frame = +3
Query: 306 LGQAPARQAVIFAG-----------LPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 452
+GQAPARQA + AG LP ST CTT+NKVCASGMKSIM AAQ L G+Q +
Sbjct: 1 MGQAPARQAALGAGTRXVTSIRDQALPISTPCTTINKVCASGMKSIMAAAQSLMCGSQGV 60
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 82.2 bits (194), Expect = 5e-16
Identities = 47/110 (42%), Positives = 66/110 (60%)
Frame = +3
Query: 525 GMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAF 704
G Q+ D + + GLTD+ MG AEN A+K ITR++ D++A+ S +R AAA+E+ AF
Sbjct: 799 GAQMEDTL-WQGLTDMLPGLPMGITAENLAEKYNITREECDQFALLSQQRWAAAHESGAF 857
Query: 705 VDELVPVPVPQKRGAPVIFAEXEXYKXVNFEKFTKLSTVFQKENGTVTAG 854
E+VPVPV K+G + E+ KL VF K+NGTV+AG
Sbjct: 858 TAEIVPVPVKGKKGPEQFAVDEHPRPETTIEQLAKLPAVF-KKNGTVSAG 906
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = +3
Query: 588 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAE 767
MG+ A+ A ++RQ+QDEYA+ S+ + A +A D ++ VP G + +
Sbjct: 13 MGHSADRLASAFHVSRQEQDEYALRSHTLAHQATQAGKLTD-VLSYQVP---GTTTVLSA 68
Query: 768 XEXYKXVNFEKFTKLSTVFQKENGTVTA 851
+ ++ KL F + GT+TA
Sbjct: 69 DNGIRVSTPQQMAKLKPAFIRPFGTITA 96
>SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 533 LHSSIRSFTSLQIKRYI*HRFHPTSKYYILGSSL*TLCCQ-HYRFHARGTYFVYSCTYGT 357
+HS+ R+ + RY H T + S+ TLC Q H R+ + T+ +YS T+
Sbjct: 102 MHSNTRTLCTKTHARYALKHTHTT-----MHSNTRTLCTQTHARYALKHTHTMYSNTHTL 156
Query: 356 FWQTCKYYSL 327
QT +Y+L
Sbjct: 157 CTQTHAHYAL 166
>SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1433
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+VFD ++ + M C+ N K + +Q E+ +Y R +A A
Sbjct: 1214 DGVVFDAAIELAHPSDMWVCSTN--KMGALVQQRLIEHHRKNYPRLSATIRFDPDPSVAH 1271
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRG V
Sbjct: 1272 RYRKQERPVPVPGKRGEKV 1290
>SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17)
Length = 1571
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -1
Query: 268 ISSLGIPALSIAALTATAPNSDADKLDKLPRKEPIGVLTADAITTSLRETLVENAAIAVN 89
I+S +P + L AT S L+K +E + A A+ T + TLVE + VN
Sbjct: 972 ITSTSVPEQNATVLPATTFQS----LNKTTTEESVVEPNATAVPTRVNATLVETTGMPVN 1027
Query: 88 I 86
+
Sbjct: 1028 V 1028
>SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 284 WQCLFCKFGPSTCKTSCNICRFAKKY-HMYNCK-QSMCLWHEIYNVGSTR 427
W+C K PS ++ + F KKY H + +S LW+ Y + + R
Sbjct: 80 WECEHVKPVPSDVRSKMRLSGFYKKYLHAFGIPVRSNTLWYRTYAMSTDR 129
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 28.3 bits (60), Expect = 8.4
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + M C+ N K + RQ E+ +Y R A A
Sbjct: 4297 DGVAFDAAIEQARPSDMWVCSTN--KMGALVRQRLVEHHRKNYPRLPATIRFDPDPSVAY 4354
Query: 699 AFVDELVPVPVPQKRGAPVIFAEXEXYKXVNFEKFTKLSTVFQKENGTV 845
+ + PVPVP KRG V + YK N K+ TV + T+
Sbjct: 4355 RYRKQGRPVPVPGKRGEKV-----DAYK--NTSKYAGWGTVHRVHGDTI 4396
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + + +M C+ N L +Q E+ +Y R A A
Sbjct: 564 DGVAFDAAIEQAHSSYMWVCSTNKIGAL--VQQRLIEHHRKNYPRLPATIRFDPDPSVAH 621
Query: 699 AFVDELVPVPVPQKRGAPVI 758
+ + PVPVP KRG V+
Sbjct: 622 CYRKQGRPVPVPGKRGEKVV 641
>SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21)
Length = 956
Score = 28.3 bits (60), Expect = 8.4
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 735 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 792
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRG V
Sbjct: 793 RYRKQGRPVPVPGKRGEKV 811
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 284 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCL 394
WQ + + GP KTSC +C KY++ N CL
Sbjct: 864 WQSNYTQCGPCASKTSCPVCNI--KYNL-NDLMIQCL 897
>SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 28.3 bits (60), Expect = 8.4
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + + M C+ N K + +Q E+ +Y R A A
Sbjct: 707 DGVAFDAAIEQAHPSDMWVCSTN--KMGALVQQQLVEHHRKNYPRLPAIIRFDPDPSVAH 764
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRGA V
Sbjct: 765 RYRKQGRPVPVPGKRGAKV 783
>SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 8.4
Identities = 27/102 (26%), Positives = 41/102 (40%)
Frame = +3
Query: 237 IERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIML 416
I + GI EEI +V A + + + G PKS +CT+VN+V G+ +
Sbjct: 72 IVKVGITTEEIDY----HVHKAIIEHGAYPSPLNYRGFPKS-VCTSVNEVAVHGIPNSRC 126
Query: 417 AAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVD 542
G + GG+ F + G G +LVD
Sbjct: 127 LQNGDLLSVDISLFYGGVHGDLCETFLV--GNVDESGRRLVD 166
>SB_27146| Best HMM Match : LIM (HMM E-Value=9.7)
Length = 296
Score = 28.3 bits (60), Expect = 8.4
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 102 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 159
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRG V
Sbjct: 160 RYRKQGRPVPVPGKRGEKV 178
>SB_21674| Best HMM Match : LIM (HMM E-Value=0.44)
Length = 885
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + ++ M C+ N K + +Q E+ + Y R A A
Sbjct: 664 DGVAFDAAIEQAHRSDMWVCSTN--KMGALVQQRLVEHHMKKYPRLPATIRFDPDPSVAH 721
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRG V
Sbjct: 722 RYRKQGRPVPVPGKRGEKV 740
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,104,493
Number of Sequences: 59808
Number of extensions: 500450
Number of successful extensions: 1464
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -